RNA–Protein interactions for RNA: ENST00000459909.1

TMEM50B-205, Transcript of transmembrane protein 50B, humanhuman

TSL 2

Gene TMEM50B, Length 618 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-205ENST00000459909 AHCYL2Q96HN2 611 aaKnown RBP16.52■□□□□ 0.24
TMEM50B-205ENST00000459909 TUBGCP5Q96RT8 1024 aa16.52■□□□□ 0.24
TMEM50B-205ENST00000459909 SUDS3Q9H7L9 328 aaPredicted RBP16.52■□□□□ 0.24
TMEM50B-205ENST00000459909 CATSPERBQ9H7T0 1116 aa16.52■□□□□ 0.24
TMEM50B-205ENST00000459909 PCDH18Q9HCL0 1135 aa16.52■□□□□ 0.24
TMEM50B-205ENST00000459909 TLK1Q9UKI8 766 aa16.52■□□□□ 0.24
TMEM50B-205ENST00000459909 POLHQ9Y253 713 aa16.52■□□□□ 0.24
TMEM50B-205ENST00000459909 MRPS18BQ9Y676 258 aaKnown RBP16.52■□□□□ 0.24
TMEM50B-205ENST00000459909 RPS6KL1Q9Y6S9 549 aa16.52■□□□□ 0.24
TMEM50B-205ENST00000459909 CACNA1DQ01668 2161 aa16.51■□□□□ 0.23
TMEM50B-205ENST00000459909 GOLGA6L9A6NEM1 432 aa16.51■□□□□ 0.23
TMEM50B-205ENST00000459909 USP27XA6NNY8 438 aa16.51■□□□□ 0.23
TMEM50B-205ENST00000459909 CEACAM5P06731 702 aa16.51■□□□□ 0.23
TMEM50B-205ENST00000459909 ELAVL4P26378 380 aaKnown RBP16.51■□□□□ 0.23
TMEM50B-205ENST00000459909 COL8A1P27658 744 aa16.51■□□□□ 0.23
TMEM50B-205ENST00000459909 TNFRSF8P28908 595 aa16.51■□□□□ 0.23
TMEM50B-205ENST00000459909 HTR7P34969 479 aa16.51■□□□□ 0.23
TMEM50B-205ENST00000459909 ZNF135P52742 658 aaPredicted RBP16.51■□□□□ 0.23
TMEM50B-205ENST00000459909 PDK2Q15119 407 aa16.51■□□□□ 0.23
TMEM50B-205ENST00000459909 CYTH1Q15438 398 aa16.51■□□□□ 0.23
TMEM50B-205ENST00000459909 AFMIDQ63HM1 303 aa16.51■□□□□ 0.23
TMEM50B-205ENST00000459909 MAP7D3Q8IWC1 876 aa16.51■□□□□ 0.23
TMEM50B-205ENST00000459909 TRIM58Q8NG06 486 aa16.51■□□□□ 0.23
TMEM50B-205ENST00000459909 OR10G6Q8NH81 332 aa16.51■□□□□ 0.23
TMEM50B-205ENST00000459909 KLC2Q9H0B6 622 aa16.51■□□□□ 0.23
TMEM50B-205ENST00000459909 PHPT1Q9NRX4 125 aaPredicted RBP16.51■□□□□ 0.23
TMEM50B-205ENST00000459909 CWC15Q9P013 229 aaKnown RBP16.51■□□□□ 0.23
TMEM50B-205ENST00000459909 PACSIN2Q9UNF0 486 aaPredicted RBP16.51■□□□□ 0.23
TMEM50B-205ENST00000459909 CCDC66A2RUB6 948 aa16.5■□□□□ 0.23
TMEM50B-205ENST00000459909 A8MU76 341 aa16.5■□□□□ 0.23
TMEM50B-205ENST00000459909 FGF10O15520 208 aaPredicted RBP16.5■□□□□ 0.23
TMEM50B-205ENST00000459909 FUCA1P04066 466 aa16.5■□□□□ 0.23
TMEM50B-205ENST00000459909 CD48P09326 243 aa16.5■□□□□ 0.23
TMEM50B-205ENST00000459909 GM2AP17900 193 aa16.5■□□□□ 0.23
TMEM50B-205ENST00000459909 F8A1P23610 371 aa16.5■□□□□ 0.23
TMEM50B-205ENST00000459909 KDELR1P24390 212 aa16.5■□□□□ 0.23
TMEM50B-205ENST00000459909 CTNNA1P35221 906 aaKnown RBP16.5■□□□□ 0.23
TMEM50B-205ENST00000459909 GNPDA1P46926 289 aa16.5■□□□□ 0.23
TMEM50B-205ENST00000459909 MARCKSL1P49006 195 aa16.5■□□□□ 0.23
TMEM50B-205ENST00000459909 PPM1FP49593 454 aaPredicted RBP16.5■□□□□ 0.23
TMEM50B-205ENST00000459909 PMS2P54278 862 aa16.5■□□□□ 0.23
TMEM50B-205ENST00000459909 YBEYP58557 167 aaPredicted RBP16.5■□□□□ 0.23
TMEM50B-205ENST00000459909 CTBSQ01459 385 aa16.5■□□□□ 0.23
TMEM50B-205ENST00000459909 MMRN1Q13201 1228 aa16.5■□□□□ 0.23
TMEM50B-205ENST00000459909 SNAP47Q5SQN1 464 aa16.5■□□□□ 0.23
TMEM50B-205ENST00000459909 WDR74Q6RFH5 385 aaPredicted RBP16.5■□□□□ 0.23
TMEM50B-205ENST00000459909 RFX8Q6ZV50 586 aa16.5■□□□□ 0.23
TMEM50B-205ENST00000459909 CAMK1DQ8IU85 385 aa16.5■□□□□ 0.23
TMEM50B-205ENST00000459909 PELI3Q8N2H9 469 aa16.5■□□□□ 0.23
TMEM50B-205ENST00000459909 UBL4BQ8N7F7 174 aa16.5■□□□□ 0.23
TMEM50B-205ENST00000459909 RAPGEF5Q92565 580 aa16.5■□□□□ 0.23
TMEM50B-205ENST00000459909 KRT35Q92764 455 aa16.5■□□□□ 0.23
TMEM50B-205ENST00000459909 RNF25Q96BH1 459 aaPredicted RBP16.5■□□□□ 0.23
TMEM50B-205ENST00000459909 PHF12Q96QT6 1004 aa16.5■□□□□ 0.23
TMEM50B-205ENST00000459909 NOL6Q9H6R4 1146 aaKnown RBP16.5■□□□□ 0.23
TMEM50B-205ENST00000459909 APMAPQ9HDC9 416 aa16.5■□□□□ 0.23
TMEM50B-205ENST00000459909 CASS4Q9NQ75 786 aa16.5■□□□□ 0.23
TMEM50B-205ENST00000459909 SUFUQ9UMX1 484 aa16.5■□□□□ 0.23
TMEM50B-205ENST00000459909 MAP4K5Q9Y4K4 846 aa16.5■□□□□ 0.23
TMEM50B-205ENST00000459909 MIF4GDA9UHW6 222 aaKnown RBP16.49■□□□□ 0.23
TMEM50B-205ENST00000459909 POLR1CO15160 346 aaPredicted RBP16.49■□□□□ 0.23
TMEM50B-205ENST00000459909 KIF5CO60282 957 aa16.49■□□□□ 0.23
TMEM50B-205ENST00000459909 KRT38O76015 456 aa16.49■□□□□ 0.23
TMEM50B-205ENST00000459909 PDGFAP04085 211 aa16.49■□□□□ 0.23
TMEM50B-205ENST00000459909 ERCC2P18074 760 aa16.49■□□□□ 0.23
TMEM50B-205ENST00000459909 POU3F2P20265 443 aaPredicted RBP16.49■□□□□ 0.23
TMEM50B-205ENST00000459909 CTNNA2P26232 953 aa16.49■□□□□ 0.23
TMEM50B-205ENST00000459909 DLSTP36957 453 aa16.49■□□□□ 0.23
TMEM50B-205ENST00000459909 FASLGP48023 281 aa16.49■□□□□ 0.23
TMEM50B-205ENST00000459909 ARSEP51690 589 aa16.49■□□□□ 0.23
TMEM50B-205ENST00000459909 DPYSL3Q14195 570 aa16.49■□□□□ 0.23
TMEM50B-205ENST00000459909 ERV3-1Q14264 604 aa16.49■□□□□ 0.23
TMEM50B-205ENST00000459909 DPPA4Q7L190 304 aa16.49■□□□□ 0.23
TMEM50B-205ENST00000459909 CCDC50Q8IVM0 306 aa16.49■□□□□ 0.23
TMEM50B-205ENST00000459909 RTL3Q8N8U3 475 aaKnown RBP16.49■□□□□ 0.23
TMEM50B-205ENST00000459909 CSPG4P5Q96PW8 444 aa16.49■□□□□ 0.23
TMEM50B-205ENST00000459909 SLC38A3Q99624 504 aa16.49■□□□□ 0.23
TMEM50B-205ENST00000459909 ZNF670Q9BS34 389 aa16.49■□□□□ 0.23
TMEM50B-205ENST00000459909 TEX101Q9BY14 249 aa16.49■□□□□ 0.23
TMEM50B-205ENST00000459909 FRMD8Q9BZ67 464 aaPredicted RBP16.49■□□□□ 0.23
TMEM50B-205ENST00000459909 ATP13A3Q9H7F0 1226 aa16.49■□□□□ 0.23
TMEM50B-205ENST00000459909 RCOR3Q9P2K3 495 aaPredicted RBP16.49■□□□□ 0.23
TMEM50B-205ENST00000459909 UBA2Q9UBT2 640 aaPredicted RBP16.49■□□□□ 0.23
TMEM50B-205ENST00000459909 PCDHA3Q9Y5H8 950 aa16.49■□□□□ 0.23
TMEM50B-205ENST00000459909 ST14Q9Y5Y6 855 aa16.49■□□□□ 0.23
TMEM50B-205ENST00000459909 ARHGEF17Q96PE2 2063 aaPredicted RBP16.49■□□□□ 0.23
TMEM50B-205ENST00000459909 ANKRD36A6QL64 1941 aa16.49■□□□□ 0.23
TMEM50B-205ENST00000459909 RASA4BC9J798 803 aa16.48■□□□□ 0.23
TMEM50B-205ENST00000459909 INPP4BO15327 924 aa16.48■□□□□ 0.23
TMEM50B-205ENST00000459909 RASA4O43374 803 aa16.48■□□□□ 0.23
TMEM50B-205ENST00000459909 ZRANB2O95218 330 aaKnown RBP eCLIP16.48■□□□□ 0.23
TMEM50B-205ENST00000459909 CLDN1O95832 211 aa16.48■□□□□ 0.23
TMEM50B-205ENST00000459909 FURINP09958 794 aa16.48■□□□□ 0.23
TMEM50B-205ENST00000459909 AMPD1P23109 780 aa16.48■□□□□ 0.23
TMEM50B-205ENST00000459909 MSNP26038 577 aaKnown RBP16.48■□□□□ 0.23
TMEM50B-205ENST00000459909 SERPINA4P29622 427 aa16.48■□□□□ 0.23
TMEM50B-205ENST00000459909 ADCY8P40145 1251 aa16.48■□□□□ 0.23
TMEM50B-205ENST00000459909 ACTR1BP42025 376 aa16.48■□□□□ 0.23
TMEM50B-205ENST00000459909 HCAR3P49019 387 aa16.48■□□□□ 0.23
TMEM50B-205ENST00000459909 RWDD2BP57060 319 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms