RNA–Protein interactions for RNA: ENST00000458709.1

PRAMEF35P-201, Transcript of PRAME family member 35, pseudogene, humanhuman

BASIC

Gene PRAMEF35P, Length 891 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF35P-201ENST00000458709 PTPN7P35236 360 aa11.21□□□□□ -0.61
PRAMEF35P-201ENST00000458709 ACTR1BP42025 376 aa11.21□□□□□ -0.61
PRAMEF35P-201ENST00000458709 POLD2P49005 469 aa11.21□□□□□ -0.61
PRAMEF35P-201ENST00000458709 ACTR1AP61163 376 aa11.21□□□□□ -0.61
PRAMEF35P-201ENST00000458709 GPLD1P80108 840 aa11.21□□□□□ -0.61
PRAMEF35P-201ENST00000458709 GRM3Q14832 879 aa11.21□□□□□ -0.61
PRAMEF35P-201ENST00000458709 ACOX1Q15067 660 aa11.21□□□□□ -0.61
PRAMEF35P-201ENST00000458709 AFMIDQ63HM1 303 aa11.21□□□□□ -0.61
PRAMEF35P-201ENST00000458709 DPPA4Q7L190 304 aa11.21□□□□□ -0.61
PRAMEF35P-201ENST00000458709 MAMDC2Q7Z304 686 aaPredicted RBP11.21□□□□□ -0.61
PRAMEF35P-201ENST00000458709 NT5DC3Q86UY8 548 aa11.21□□□□□ -0.61
PRAMEF35P-201ENST00000458709 PYROXD2Q8N2H3 581 aa11.21□□□□□ -0.61
PRAMEF35P-201ENST00000458709 RTL3Q8N8U3 475 aaKnown RBP11.21□□□□□ -0.61
PRAMEF35P-201ENST00000458709 AHCYL2Q96HN2 611 aaKnown RBP11.21□□□□□ -0.61
PRAMEF35P-201ENST00000458709 HES6Q96HZ4 224 aa11.21□□□□□ -0.61
PRAMEF35P-201ENST00000458709 ZNF830Q96NB3 372 aaPredicted RBP11.21□□□□□ -0.61
PRAMEF35P-201ENST00000458709 TRIT1Q9H3H1 467 aaKnown RBP11.21□□□□□ -0.61
PRAMEF35P-201ENST00000458709 FBXO8Q9NRD0 319 aa11.21□□□□□ -0.61
PRAMEF35P-201ENST00000458709 UBA2Q9UBT2 640 aaPredicted RBP11.21□□□□□ -0.61
PRAMEF35P-201ENST00000458709 TRIM10Q9UDY6 481 aa11.21□□□□□ -0.61
PRAMEF35P-201ENST00000458709 FZD10Q9ULW2 581 aa11.21□□□□□ -0.61
PRAMEF35P-201ENST00000458709 TFR2Q9UP52 801 aa11.21□□□□□ -0.61
PRAMEF35P-201ENST00000458709 POLHQ9Y253 713 aa11.21□□□□□ -0.61
PRAMEF35P-201ENST00000458709 EFR3BQ9Y2G0 817 aa11.21□□□□□ -0.61
PRAMEF35P-201ENST00000458709 PCDHB3Q9Y5E6 796 aa11.21□□□□□ -0.61
PRAMEF35P-201ENST00000458709 ALG6Q9Y672 507 aa11.21□□□□□ -0.61
PRAMEF35P-201ENST00000458709 OAS3Q9Y6K5 1087 aaKnown RBP11.21□□□□□ -0.61
PRAMEF35P-201ENST00000458709 CELSR2Q9HCU4 2923 aa11.21□□□□□ -0.62
PRAMEF35P-201ENST00000458709 ZNF106Q9H2Y7 1883 aaKnown RBP11.21□□□□□ -0.62
PRAMEF35P-201ENST00000458709 ABCA12Q86UK0 2595 aa11.21□□□□□ -0.62
PRAMEF35P-201ENST00000458709 TRBV23OR9-2A0A075B6M9 112 aa11.2□□□□□ -0.62
PRAMEF35P-201ENST00000458709 CCDC66A2RUB6 948 aa11.2□□□□□ -0.62
PRAMEF35P-201ENST00000458709 WASH4PA8MWX3 477 aa11.2□□□□□ -0.62
PRAMEF35P-201ENST00000458709 ZNF28P17035 718 aa11.2□□□□□ -0.62
PRAMEF35P-201ENST00000458709 DLSTP36957 453 aa11.2□□□□□ -0.62
PRAMEF35P-201ENST00000458709 ADCY8P40145 1251 aa11.2□□□□□ -0.62
PRAMEF35P-201ENST00000458709 PMS2P54278 862 aa11.2□□□□□ -0.62
PRAMEF35P-201ENST00000458709 CDK3Q00526 305 aa11.2□□□□□ -0.62
PRAMEF35P-201ENST00000458709 MRPL49Q13405 166 aaKnown RBP11.2□□□□□ -0.62
PRAMEF35P-201ENST00000458709 EIF2S3LQ2VIR3 472 aaKnown RBP11.2□□□□□ -0.62
PRAMEF35P-201ENST00000458709 NADK2Q4G0N4 442 aa11.2□□□□□ -0.62
PRAMEF35P-201ENST00000458709 PRR30Q53SZ7 412 aaPredicted RBP11.2□□□□□ -0.62
PRAMEF35P-201ENST00000458709 ERMARDQ5T6L9 678 aa11.2□□□□□ -0.62
PRAMEF35P-201ENST00000458709 RHOT1Q8IXI2 618 aa11.2□□□□□ -0.62
PRAMEF35P-201ENST00000458709 KATNAL2Q8IYT4 538 aa11.2□□□□□ -0.62
PRAMEF35P-201ENST00000458709 ESX1Q8N693 406 aa11.2□□□□□ -0.62
PRAMEF35P-201ENST00000458709 OR10G6Q8NH81 332 aa11.2□□□□□ -0.62
PRAMEF35P-201ENST00000458709 SLC37A2Q8TED4 501 aa11.2□□□□□ -0.62
PRAMEF35P-201ENST00000458709 ECHDC3Q96DC8 303 aa11.2□□□□□ -0.62
PRAMEF35P-201ENST00000458709 NUS1Q96E22 293 aa11.2□□□□□ -0.62
PRAMEF35P-201ENST00000458709 TUBGCP5Q96RT8 1024 aa11.2□□□□□ -0.62
PRAMEF35P-201ENST00000458709 PEBP4Q96S96 227 aa11.2□□□□□ -0.62
PRAMEF35P-201ENST00000458709 ZNF670Q9BS34 389 aa11.2□□□□□ -0.62
PRAMEF35P-201ENST00000458709 ZPBPQ9BS86 351 aa11.2□□□□□ -0.62
PRAMEF35P-201ENST00000458709 TEX101Q9BY14 249 aa11.2□□□□□ -0.62
PRAMEF35P-201ENST00000458709 TRIM55Q9BYV6 548 aa11.2□□□□□ -0.62
PRAMEF35P-201ENST00000458709 PDFQ9HBH1 243 aa11.2□□□□□ -0.62
PRAMEF35P-201ENST00000458709 PHPT1Q9NRX4 125 aaPredicted RBP11.2□□□□□ -0.62
PRAMEF35P-201ENST00000458709 KLHL3Q9UH77 587 aa11.2□□□□□ -0.62
PRAMEF35P-201ENST00000458709 CROTQ9UKG9 612 aa11.2□□□□□ -0.62
PRAMEF35P-201ENST00000458709 MAP4K5Q9Y4K4 846 aa11.2□□□□□ -0.62
PRAMEF35P-201ENST00000458709 PCDHA3Q9Y5H8 950 aa11.2□□□□□ -0.62
PRAMEF35P-201ENST00000458709 CRYBG3Q68DQ2 2970 aa11.19□□□□□ -0.62
PRAMEF35P-201ENST00000458709 CDC14CA4D256 554 aa11.19□□□□□ -0.62
PRAMEF35P-201ENST00000458709 C3orf70A6NLC5 250 aaPredicted RBP11.19□□□□□ -0.62
PRAMEF35P-201ENST00000458709 J3KR12 359 aa11.19□□□□□ -0.62
PRAMEF35P-201ENST00000458709 POLR1CO15160 346 aaPredicted RBP11.19□□□□□ -0.62
PRAMEF35P-201ENST00000458709 PRPSAP2O60256 369 aa11.19□□□□□ -0.62
PRAMEF35P-201ENST00000458709 SORBS2O94875 1100 aaKnown RBP11.19□□□□□ -0.62
PRAMEF35P-201ENST00000458709 MAP3K6O95382 1288 aa11.19□□□□□ -0.62
PRAMEF35P-201ENST00000458709 DDAH2O95865 285 aa11.19□□□□□ -0.62
PRAMEF35P-201ENST00000458709 TUBB4AP04350 444 aa11.19□□□□□ -0.62
PRAMEF35P-201ENST00000458709 COMTP21964 271 aa11.19□□□□□ -0.62
PRAMEF35P-201ENST00000458709 EPHB2P29323 1055 aa11.19□□□□□ -0.62
PRAMEF35P-201ENST00000458709 SERPINA4P29622 427 aa11.19□□□□□ -0.62
PRAMEF35P-201ENST00000458709 FASLGP48023 281 aa11.19□□□□□ -0.62
PRAMEF35P-201ENST00000458709 RIPPLY3P57055 190 aa11.19□□□□□ -0.62
PRAMEF35P-201ENST00000458709 MAP7Q14244 749 aa11.19□□□□□ -0.62
PRAMEF35P-201ENST00000458709 PDK2Q15119 407 aa11.19□□□□□ -0.62
PRAMEF35P-201ENST00000458709 HADHQ16836 314 aaKnown RBP11.19□□□□□ -0.62
PRAMEF35P-201ENST00000458709 DOK6Q6PKX4 331 aa11.19□□□□□ -0.62
PRAMEF35P-201ENST00000458709 DAAM2Q86T65 1068 aa11.19□□□□□ -0.62
PRAMEF35P-201ENST00000458709 SRLQ86TD4 932 aa11.19□□□□□ -0.62
PRAMEF35P-201ENST00000458709 SRRM1Q8IYB3 904 aaKnown RBP11.19□□□□□ -0.62
PRAMEF35P-201ENST00000458709 PAF1Q8N7H5 531 aa11.19□□□□□ -0.62
PRAMEF35P-201ENST00000458709 TSEN2Q8NCE0 465 aaKnown RBP11.19□□□□□ -0.62
PRAMEF35P-201ENST00000458709 TCTN2Q96GX1 697 aa11.19□□□□□ -0.62
PRAMEF35P-201ENST00000458709 BTBD6Q96KE9 485 aa11.19□□□□□ -0.62
PRAMEF35P-201ENST00000458709 COQ10AQ96MF6 247 aa11.19□□□□□ -0.62
PRAMEF35P-201ENST00000458709 ALS2CR12Q96Q35 445 aa11.19□□□□□ -0.62
PRAMEF35P-201ENST00000458709 SLC38A3Q99624 504 aa11.19□□□□□ -0.62
PRAMEF35P-201ENST00000458709 SNRNP25Q9BV90 132 aaKnown RBP11.19□□□□□ -0.62
PRAMEF35P-201ENST00000458709 ULBP3Q9BZM4 244 aa11.19□□□□□ -0.62
PRAMEF35P-201ENST00000458709 ATP13A3Q9H7F0 1226 aa11.19□□□□□ -0.62
PRAMEF35P-201ENST00000458709 SIDT1Q9NXL6 827 aaKnown RBP11.19□□□□□ -0.62
PRAMEF35P-201ENST00000458709 B4GALT6Q9UBX8 382 aa11.19□□□□□ -0.62
PRAMEF35P-201ENST00000458709 FBN2P35556 2912 aa11.19□□□□□ -0.62
PRAMEF35P-201ENST00000458709 SHANK1Q9Y566 2161 aa11.18□□□□□ -0.62
PRAMEF35P-201ENST00000458709 CSMD1Q96PZ7 3565 aa11.18□□□□□ -0.62
PRAMEF35P-201ENST00000458709 CENPEQ02224 2701 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms