RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 GEN1Q17RS7 908 aa16.55■□□□□ 0.24
CCDC43-202ENST00000457422 LRRC36Q1X8D7 754 aa16.55■□□□□ 0.24
CCDC43-202ENST00000457422 C1orf53Q5VUE5 145 aa16.55■□□□□ 0.24
CCDC43-202ENST00000457422 ZNF483Q8TF39 744 aaPredicted RBP16.55■□□□□ 0.24
CCDC43-202ENST00000457422 KCNA7Q96RP8 456 aa16.55■□□□□ 0.24
CCDC43-202ENST00000457422 P2RY12Q9H244 342 aa16.55■□□□□ 0.24
CCDC43-202ENST00000457422 TUBB1Q9H4B7 451 aa16.55■□□□□ 0.24
CCDC43-202ENST00000457422 EBF3Q9H4W6 596 aa16.55■□□□□ 0.24
CCDC43-202ENST00000457422 SPAG4Q9NPE6 437 aa16.55■□□□□ 0.24
CCDC43-202ENST00000457422 SAGE1Q9NXZ1 904 aa16.55■□□□□ 0.24
CCDC43-202ENST00000457422 SPG21Q9NZD8 308 aa16.55■□□□□ 0.24
CCDC43-202ENST00000457422 PKP3Q9Y446 797 aa16.55■□□□□ 0.24
CCDC43-202ENST00000457422 PRSS51A0A1B0GVH4 220 aa16.55■□□□□ 0.24
CCDC43-202ENST00000457422 E7ENX8 843 aa16.55■□□□□ 0.24
CCDC43-202ENST00000457422 MRASO14807 208 aa16.55■□□□□ 0.24
CCDC43-202ENST00000457422 GPR39O43194 453 aa16.55■□□□□ 0.24
CCDC43-202ENST00000457422 PGLSO95336 258 aa16.55■□□□□ 0.24
CCDC43-202ENST00000457422 IL2P60568 153 aa16.55■□□□□ 0.24
CCDC43-202ENST00000457422 CACNG1Q06432 222 aa16.55■□□□□ 0.24
CCDC43-202ENST00000457422 TRIM25Q14258 630 aaKnown RBP16.55■□□□□ 0.24
CCDC43-202ENST00000457422 FBXO48Q5FWF7 155 aa16.55■□□□□ 0.24
CCDC43-202ENST00000457422 ARMC12Q5T9G4 340 aa16.55■□□□□ 0.24
CCDC43-202ENST00000457422 GPR65Q8IYL9 337 aa16.55■□□□□ 0.24
CCDC43-202ENST00000457422 PCDH20Q8N6Y1 951 aaKnown RBP16.55■□□□□ 0.24
CCDC43-202ENST00000457422 OR9I1Q8NGQ6 314 aa16.55■□□□□ 0.24
CCDC43-202ENST00000457422 ROPN1LQ96C74 230 aa16.55■□□□□ 0.24
CCDC43-202ENST00000457422 MYO19Q96H55 970 aa16.55■□□□□ 0.24
CCDC43-202ENST00000457422 BTBD9Q96Q07 612 aa16.55■□□□□ 0.24
CCDC43-202ENST00000457422 NUSAP1Q9BXS6 441 aaKnown RBP16.55■□□□□ 0.24
CCDC43-202ENST00000457422 ADA2Q9NZK5 511 aa16.55■□□□□ 0.24
CCDC43-202ENST00000457422 DLGAP2Q9P1A6 1054 aa16.55■□□□□ 0.24
CCDC43-202ENST00000457422 RIMS3Q9UJD0 308 aa16.55■□□□□ 0.24
CCDC43-202ENST00000457422 K7ERQ8 282 aa16.54■□□□□ 0.24
CCDC43-202ENST00000457422 MATN4O95460 622 aa16.54■□□□□ 0.24
CCDC43-202ENST00000457422 PRAMEF12O95522 483 aa16.54■□□□□ 0.24
CCDC43-202ENST00000457422 SPATA31D3P0C874 917 aa16.54■□□□□ 0.24
CCDC43-202ENST00000457422 UQCRBP14927 111 aa16.54■□□□□ 0.24
CCDC43-202ENST00000457422 CTPS1P17812 591 aa16.54■□□□□ 0.24
CCDC43-202ENST00000457422 RFC2P35250 354 aa16.54■□□□□ 0.24
CCDC43-202ENST00000457422 MRPL19P49406 292 aaKnown RBP16.54■□□□□ 0.24
CCDC43-202ENST00000457422 AQP4P55087 323 aa16.54■□□□□ 0.24
CCDC43-202ENST00000457422 TRAP1Q12931 704 aaKnown RBP16.54■□□□□ 0.24
CCDC43-202ENST00000457422 ADGRE1Q14246 886 aa16.54■□□□□ 0.24
CCDC43-202ENST00000457422 UGT3A1Q6NUS8 523 aa16.54■□□□□ 0.24
CCDC43-202ENST00000457422 PAOXQ6QHF9 649 aa16.54■□□□□ 0.24
CCDC43-202ENST00000457422 CERS6Q6ZMG9 384 aa16.54■□□□□ 0.24
CCDC43-202ENST00000457422 SPATA31D4Q6ZUB0 917 aa16.54■□□□□ 0.24
CCDC43-202ENST00000457422 TAS2R42Q7RTR8 314 aa16.54■□□□□ 0.24
CCDC43-202ENST00000457422 PIH1D2Q8WWB5 315 aa16.54■□□□□ 0.24
CCDC43-202ENST00000457422 EID2BQ96D98 161 aa16.54■□□□□ 0.24
CCDC43-202ENST00000457422 C2orf49Q9BVC5 232 aaPredicted RBP16.54■□□□□ 0.24
CCDC43-202ENST00000457422 TM6SF2Q9BZW4 377 aa16.54■□□□□ 0.24
CCDC43-202ENST00000457422 TMEM181Q9P2C4 612 aa16.54■□□□□ 0.24
CCDC43-202ENST00000457422 EPS15L1Q9UBC2 864 aa16.54■□□□□ 0.24
CCDC43-202ENST00000457422 GIMAP2Q9UG22 337 aa16.54■□□□□ 0.24
CCDC43-202ENST00000457422 CD300AQ9UGN4 299 aa16.54■□□□□ 0.24
CCDC43-202ENST00000457422 PCTPQ9UKL6 214 aa16.54■□□□□ 0.24
CCDC43-202ENST00000457422 ATP11BQ9Y2G3 1177 aa16.54■□□□□ 0.24
CCDC43-202ENST00000457422 A0A1B0GTL3 188 aa16.54■□□□□ 0.24
CCDC43-202ENST00000457422 ABHD14A-ACY1A0A1B0GW23 586 aa16.54■□□□□ 0.24
CCDC43-202ENST00000457422 MLYCDO95822 493 aa16.54■□□□□ 0.24
CCDC43-202ENST00000457422 CAPNS1P04632 268 aa16.54■□□□□ 0.24
CCDC43-202ENST00000457422 LINGO3P0C6S8 592 aa16.54■□□□□ 0.24
CCDC43-202ENST00000457422 LBPP18428 481 aa16.54■□□□□ 0.24
CCDC43-202ENST00000457422 ATXN3P54252 364 aaPredicted RBP16.54■□□□□ 0.24
CCDC43-202ENST00000457422 CYP4F8P98187 520 aa16.54■□□□□ 0.24
CCDC43-202ENST00000457422 OR52E8Q6IFG1 317 aa16.54■□□□□ 0.24
CCDC43-202ENST00000457422 OGFOD2Q6N063 350 aa16.54■□□□□ 0.24
CCDC43-202ENST00000457422 EFL1Q7Z2Z2 1120 aaKnown RBP16.54■□□□□ 0.24
CCDC43-202ENST00000457422 LYSMD3Q7Z3D4 306 aa16.54■□□□□ 0.24
CCDC43-202ENST00000457422 CMTR2Q8IYT2 770 aaKnown RBP16.54■□□□□ 0.24
CCDC43-202ENST00000457422 OR6K2Q8NGY2 324 aa16.54■□□□□ 0.24
CCDC43-202ENST00000457422 GRIN3AQ8TCU5 1115 aa16.54■□□□□ 0.24
CCDC43-202ENST00000457422 EEF1AKMT1Q8WVE0 214 aa16.54■□□□□ 0.24
CCDC43-202ENST00000457422 ACDQ96AP0 544 aa16.54■□□□□ 0.24
CCDC43-202ENST00000457422 LINGO1Q96FE5 620 aa16.54■□□□□ 0.24
CCDC43-202ENST00000457422 PDLIM5Q96HC4 596 aaKnown RBP16.54■□□□□ 0.24
CCDC43-202ENST00000457422 GPR63Q9BZJ6 419 aa16.54■□□□□ 0.24
CCDC43-202ENST00000457422 SEMA4BQ9NPR2 832 aaPredicted RBP16.54■□□□□ 0.24
CCDC43-202ENST00000457422 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.54■□□□□ 0.24
CCDC43-202ENST00000457422 POLG2Q9UHN1 485 aa16.54■□□□□ 0.24
CCDC43-202ENST00000457422 CROTQ9UKG9 612 aa16.54■□□□□ 0.24
CCDC43-202ENST00000457422 ASB3Q9Y575 518 aa16.54■□□□□ 0.24
CCDC43-202ENST00000457422 PCDHB1Q9Y5F3 818 aa16.54■□□□□ 0.24
CCDC43-202ENST00000457422 SLC30A1Q9Y6M5 507 aa16.54■□□□□ 0.24
CCDC43-202ENST00000457422 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.53■□□□□ 0.24
CCDC43-202ENST00000457422 NCF1BA6NI72 391 aaPredicted RBP16.53■□□□□ 0.24
CCDC43-202ENST00000457422 NCF1CA8MVU1 366 aaPredicted RBP16.53■□□□□ 0.24
CCDC43-202ENST00000457422 E5RI56 91 aa16.53■□□□□ 0.24
CCDC43-202ENST00000457422 TEX28O15482 410 aa16.53■□□□□ 0.24
CCDC43-202ENST00000457422 ESRRBO95718 433 aa16.53■□□□□ 0.24
CCDC43-202ENST00000457422 C8BP07358 591 aa16.53■□□□□ 0.24
CCDC43-202ENST00000457422 LYNP07948 512 aa16.53■□□□□ 0.24
CCDC43-202ENST00000457422 ALPIP09923 528 aa16.53■□□□□ 0.24
CCDC43-202ENST00000457422 PRR35P0CG20 571 aa16.53■□□□□ 0.24
CCDC43-202ENST00000457422 BMP1P13497 986 aa16.53■□□□□ 0.24
CCDC43-202ENST00000457422 NCF1P14598 390 aaPredicted RBP16.53■□□□□ 0.24
CCDC43-202ENST00000457422 CSNK1DP48730 415 aa16.53■□□□□ 0.24
CCDC43-202ENST00000457422 CLCN7P51798 805 aa16.53■□□□□ 0.24
CCDC43-202ENST00000457422 HK3P52790 923 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms