RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 AKT2P31751 481 aa16.45■□□□□ 0.22
CCDC90B-202ENST00000455220 EIF3BP55884 814 aaKnown RBP16.45■□□□□ 0.22
CCDC90B-202ENST00000455220 MPP1Q00013 466 aa16.45■□□□□ 0.22
CCDC90B-202ENST00000455220 ITIH4Q14624 930 aa16.45■□□□□ 0.22
CCDC90B-202ENST00000455220 INPP5AQ14642 412 aa16.45■□□□□ 0.22
CCDC90B-202ENST00000455220 DBN1Q16643 649 aa16.45■□□□□ 0.22
CCDC90B-202ENST00000455220 RNF187Q5TA31 235 aaPredicted RBP16.45■□□□□ 0.22
CCDC90B-202ENST00000455220 TAS2R42Q7RTR8 314 aa16.45■□□□□ 0.22
CCDC90B-202ENST00000455220 HDXQ7Z353 690 aa16.45■□□□□ 0.22
CCDC90B-202ENST00000455220 LDB1Q86U70 411 aaPredicted RBP16.45■□□□□ 0.22
CCDC90B-202ENST00000455220 SLC41A1Q8IVJ1 513 aa16.45■□□□□ 0.22
CCDC90B-202ENST00000455220 PNPLA1Q8N8W4 532 aa16.45■□□□□ 0.22
CCDC90B-202ENST00000455220 ZBTB44Q8NCP5 570 aa16.45■□□□□ 0.22
CCDC90B-202ENST00000455220 COX14Q96I36 57 aa16.45■□□□□ 0.22
CCDC90B-202ENST00000455220 PAFAH2Q99487 392 aa16.45■□□□□ 0.22
CCDC90B-202ENST00000455220 TMEM109Q9BVC6 243 aa16.45■□□□□ 0.22
CCDC90B-202ENST00000455220 TEX101Q9BY14 249 aa16.45■□□□□ 0.22
CCDC90B-202ENST00000455220 ZSCAN32Q9NX65 697 aa16.45■□□□□ 0.22
CCDC90B-202ENST00000455220 ZDHHC3Q9NYG2 299 aa16.45■□□□□ 0.22
CCDC90B-202ENST00000455220 HS3ST3A1Q9Y663 406 aa16.45■□□□□ 0.22
CCDC90B-202ENST00000455220 GON4LQ3T8J9 2241 aa16.44■□□□□ 0.22
CCDC90B-202ENST00000455220 GALR2O43603 387 aaPredicted RBP16.44■□□□□ 0.22
CCDC90B-202ENST00000455220 AHSGP02765 367 aa16.44■□□□□ 0.22
CCDC90B-202ENST00000455220 CD27P26842 260 aa16.44■□□□□ 0.22
CCDC90B-202ENST00000455220 PMLP29590 882 aa16.44■□□□□ 0.22
CCDC90B-202ENST00000455220 CNR2P34972 360 aa16.44■□□□□ 0.22
CCDC90B-202ENST00000455220 PPARGP37231 505 aaPredicted RBP16.44■□□□□ 0.22
CCDC90B-202ENST00000455220 GP5P40197 560 aa16.44■□□□□ 0.22
CCDC90B-202ENST00000455220 CSE1LP55060 971 aaKnown RBP16.44■□□□□ 0.22
CCDC90B-202ENST00000455220 ZNF789Q5FWF6 425 aa16.44■□□□□ 0.22
CCDC90B-202ENST00000455220 LDLRAP1Q5SW96 308 aa16.44■□□□□ 0.22
CCDC90B-202ENST00000455220 GPRC6AQ5T6X5 926 aa16.44■□□□□ 0.22
CCDC90B-202ENST00000455220 LRIG3Q6UXM1 1119 aa16.44■□□□□ 0.22
CCDC90B-202ENST00000455220 PACS1Q6VY07 963 aa16.44■□□□□ 0.22
CCDC90B-202ENST00000455220 GCNT7Q6ZNI0 430 aa16.44■□□□□ 0.22
CCDC90B-202ENST00000455220 HEATR4Q86WZ0 1026 aa16.44■□□□□ 0.22
CCDC90B-202ENST00000455220 PHYKPLQ8IUZ5 450 aa16.44■□□□□ 0.22
CCDC90B-202ENST00000455220 OR2W6PQ8NHA6 318 aa16.44■□□□□ 0.22
CCDC90B-202ENST00000455220 LPGAT1Q92604 370 aa16.44■□□□□ 0.22
CCDC90B-202ENST00000455220 HSPA12BQ96MM6 686 aa16.44■□□□□ 0.22
CCDC90B-202ENST00000455220 ZIM3Q96PE6 472 aa16.44■□□□□ 0.22
CCDC90B-202ENST00000455220 TTC1Q99614 292 aa16.44■□□□□ 0.22
CCDC90B-202ENST00000455220 FBXO6Q9NRD1 293 aaPredicted RBP16.44■□□□□ 0.22
CCDC90B-202ENST00000455220 SLC24A2Q9UI40 661 aa16.44■□□□□ 0.22
CCDC90B-202ENST00000455220 VPS9D1Q9Y2B5 631 aa16.44■□□□□ 0.22
CCDC90B-202ENST00000455220 SPAG17Q6Q759 2223 aa16.44■□□□□ 0.22
CCDC90B-202ENST00000455220 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 TOR1BO14657 336 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 FPGTO14772 594 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 PFDN6O15212 129 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 HRO43593 1189 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 IVLP07476 585 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 F7P08709 466 aaPredicted RBP16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 HOXC4P09017 264 aaPredicted RBP16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 PTGER3P43115 390 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 ADARP55265 1226 aaKnown RBP16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 CDK3Q00526 305 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 RASA2Q15283 850 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 PMS2CLQ68D20 193 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 KYAT3Q6YP21 454 aaKnown RBP16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 STRA8Q7Z7C7 330 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 ABI3BPQ7Z7G0 1075 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 TDRPQ86YL5 185 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 TMEFF1Q8IYR6 380 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 DCAKDQ8WVC6 231 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 DNASE2BQ8WZ79 361 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 HIC2Q96JB3 615 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 BMFQ96LC9 184 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 COPS8Q99627 209 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 MYOCQ99972 504 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 C1QTNF1Q9BXJ1 281 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 ROPN1BQ9BZX4 212 aaPredicted RBP16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 WDR26Q9H7D7 661 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 VIPAS39Q9H9C1 493 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 ROPN1Q9HAT0 212 aaPredicted RBP16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 ZNF180Q9UJW8 692 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 THADAQ6YHU6 1953 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 USP34Q70CQ2 3546 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 POM121BA6NF01 834 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 POC1B-GALNT4F8VUJ3 575 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 MAP2K7O14733 419 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 INPP4BO15327 924 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 NDUFS3O75489 264 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 HAUS5O94927 633 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 SLC25A14O95258 325 aaPredicted RBP16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 MSH2P43246 934 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 CD151P48509 253 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 PFN3P60673 137 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 B4GALNT1Q00973 533 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 ZNF844Q08AG5 666 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 IFFO1Q0D2I5 559 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 ILF2Q12905 390 aaKnown RBP16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 SRSF5Q13243 272 aaKnown RBP16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 KHDC1Q4VXA5 237 aaKnown RBP16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 GRTP1Q5TC63 336 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 ADGRD1Q6QNK2 874 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 KDM7AQ6ZMT4 941 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 LPCAT2Q7L5N7 544 aa16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 ZC3HC1Q86WB0 502 aaKnown RBP16.43■□□□□ 0.22
CCDC90B-202ENST00000455220 RBFAQ8N0V3 343 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms