RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 MAMDC4Q6UXC1 1216 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 KLHDC9Q8NEP7 349 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 ACTRT2Q8TDY3 377 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 MYLIPQ8WY64 445 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 CIPCQ9C0C6 399 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 ROGDIQ9GZN7 287 aa11.12□□□□□ -0.63
DDR1-240ENST00000454612 AGO1Q9UL18 857 aaKnown RBP11.12□□□□□ -0.63
DDR1-240ENST00000454612 LINC00854A0A1B0GVQ3 168 aa11.11□□□□□ -0.63
DDR1-240ENST00000454612 FGF10O15520 208 aaPredicted RBP11.11□□□□□ -0.63
DDR1-240ENST00000454612 ZNF865P0CJ78 1059 aaPredicted RBP11.11□□□□□ -0.63
DDR1-240ENST00000454612 ADSLP30566 484 aaPredicted RBP11.11□□□□□ -0.63
DDR1-240ENST00000454612 RECQLP46063 649 aaPredicted RBP11.11□□□□□ -0.63
DDR1-240ENST00000454612 SP3Q02447 781 aa11.11□□□□□ -0.63
DDR1-240ENST00000454612 PWP1Q13610 501 aa11.11□□□□□ -0.63
DDR1-240ENST00000454612 TLR1Q15399 786 aa11.11□□□□□ -0.63
DDR1-240ENST00000454612 CARTPTQ16568 116 aa11.11□□□□□ -0.63
DDR1-240ENST00000454612 PERM1Q5SV97 790 aa11.11□□□□□ -0.63
DDR1-240ENST00000454612 GPR107Q5VW38 600 aa11.11□□□□□ -0.63
DDR1-240ENST00000454612 TMEM53Q6P2H8 277 aa11.11□□□□□ -0.63
DDR1-240ENST00000454612 CLYBLQ8N0X4 340 aa11.11□□□□□ -0.63
DDR1-240ENST00000454612 SOCS4Q8WXH5 440 aa11.11□□□□□ -0.63
DDR1-240ENST00000454612 TRIB2Q92519 343 aa11.11□□□□□ -0.63
DDR1-240ENST00000454612 CENPIQ92674 756 aaPredicted RBP11.11□□□□□ -0.63
DDR1-240ENST00000454612 ZFYVE19Q96K21 471 aa11.11□□□□□ -0.63
DDR1-240ENST00000454612 SLC25A51Q9H1U9 297 aa11.11□□□□□ -0.63
DDR1-240ENST00000454612 NOL6Q9H6R4 1146 aaKnown RBP11.11□□□□□ -0.63
DDR1-240ENST00000454612 DKK3Q9UBP4 350 aa11.11□□□□□ -0.63
DDR1-240ENST00000454612 ITGB1BP2Q9UKP3 347 aa11.11□□□□□ -0.63
DDR1-240ENST00000454612 SORCS3Q9UPU3 1222 aa11.11□□□□□ -0.63
DDR1-240ENST00000454612 LAMA3Q16787 3333 aa11.11□□□□□ -0.63
DDR1-240ENST00000454612 TRIM64CA6NLI5 447 aa11.11□□□□□ -0.63
DDR1-240ENST00000454612 TMEM114B3SHH9 223 aa11.11□□□□□ -0.63
DDR1-240ENST00000454612 DUSP11O75319 330 aaKnown RBP11.11□□□□□ -0.63
DDR1-240ENST00000454612 RPL9P32969 192 aaKnown RBP11.11□□□□□ -0.63
DDR1-240ENST00000454612 HALP42357 657 aa11.11□□□□□ -0.63
DDR1-240ENST00000454612 CLCN5P51795 746 aa11.11□□□□□ -0.63
DDR1-240ENST00000454612 RAP1GDS1P52306 607 aa11.11□□□□□ -0.63
DDR1-240ENST00000454612 IL2P60568 153 aa11.11□□□□□ -0.63
DDR1-240ENST00000454612 VAC14Q08AM6 782 aa11.11□□□□□ -0.63
DDR1-240ENST00000454612 LAPTM5Q13571 262 aa11.11□□□□□ -0.63
DDR1-240ENST00000454612 OMA1Q96E52 524 aa11.11□□□□□ -0.63
DDR1-240ENST00000454612 ATG10Q9H0Y0 220 aa11.11□□□□□ -0.63
DDR1-240ENST00000454612 POLR3HQ9Y535 204 aaPredicted RBP11.11□□□□□ -0.63
DDR1-240ENST00000454612 TRPM7Q96QT4 1865 aa11.11□□□□□ -0.63
DDR1-240ENST00000454612 PCP4L1A6NKN8 68 aa11.11□□□□□ -0.63
DDR1-240ENST00000454612 GRID2O43424 1007 aa11.11□□□□□ -0.63
DDR1-240ENST00000454612 ESRRBO95718 433 aa11.11□□□□□ -0.63
DDR1-240ENST00000454612 CDH3P22223 829 aa11.11□□□□□ -0.63
DDR1-240ENST00000454612 PRDX3P30048 256 aaKnown RBP11.11□□□□□ -0.63
DDR1-240ENST00000454612 CORO1AP31146 461 aaKnown RBP11.11□□□□□ -0.63
DDR1-240ENST00000454612 KCNC1P48547 511 aa11.11□□□□□ -0.63
DDR1-240ENST00000454612 INHBCP55103 352 aa11.11□□□□□ -0.63
DDR1-240ENST00000454612 LPIN1Q14693 890 aa11.11□□□□□ -0.63
DDR1-240ENST00000454612 MS4A13Q5J8X5 152 aa11.11□□□□□ -0.63
DDR1-240ENST00000454612 SAMD4BQ5PRF9 694 aaKnown RBP11.11□□□□□ -0.63
DDR1-240ENST00000454612 GPR141Q7Z602 305 aa11.11□□□□□ -0.63
DDR1-240ENST00000454612 DDX53Q86TM3 631 aaKnown RBP11.11□□□□□ -0.63
DDR1-240ENST00000454612 SLC22A9Q8IVM8 553 aa11.11□□□□□ -0.63
DDR1-240ENST00000454612 STAG3L4Q8TBR4 150 aa11.11□□□□□ -0.63
DDR1-240ENST00000454612 MED8Q96G25 268 aa11.11□□□□□ -0.63
DDR1-240ENST00000454612 FCRL5Q96RD9 977 aa11.11□□□□□ -0.63
DDR1-240ENST00000454612 SMAD5Q99717 465 aaKnown RBP11.11□□□□□ -0.63
DDR1-240ENST00000454612 TRIM15Q9C019 465 aa11.11□□□□□ -0.63
DDR1-240ENST00000454612 SMG9Q9H0W8 520 aaKnown RBP11.11□□□□□ -0.63
DDR1-240ENST00000454612 OSER1Q9NX31 292 aa11.11□□□□□ -0.63
DDR1-240ENST00000454612 PCDHGB4Q9UN71 923 aa11.11□□□□□ -0.63
DDR1-240ENST00000454612 PCDHGB5Q9Y5G0 923 aa11.11□□□□□ -0.63
DDR1-240ENST00000454612 RAI2Q9Y5P3 530 aa11.11□□□□□ -0.63
DDR1-240ENST00000454612 A0A087X1B8 175 aa11.1□□□□□ -0.63
DDR1-240ENST00000454612 A0A1B0GTW7 788 aa11.1□□□□□ -0.63
DDR1-240ENST00000454612 FAM155AB1AL88 458 aaPredicted RBP11.1□□□□□ -0.63
DDR1-240ENST00000454612 TAF4O00268 1085 aa11.1□□□□□ -0.63
DDR1-240ENST00000454612 TRAFD1O14545 582 aaPredicted RBP11.1□□□□□ -0.63
DDR1-240ENST00000454612 TACR2P21452 398 aa11.1□□□□□ -0.63
DDR1-240ENST00000454612 NADK2Q4G0N4 442 aa11.1□□□□□ -0.63
DDR1-240ENST00000454612 SPESP1Q6UW49 350 aa11.1□□□□□ -0.63
DDR1-240ENST00000454612 BNIPLQ7Z465 357 aa11.1□□□□□ -0.63
DDR1-240ENST00000454612 SCD5Q86SK9 330 aa11.1□□□□□ -0.63
DDR1-240ENST00000454612 CCDC126Q96EE4 140 aa11.1□□□□□ -0.63
DDR1-240ENST00000454612 FEM1CQ96JP0 617 aa11.1□□□□□ -0.63
DDR1-240ENST00000454612 NSMCE2Q96MF7 247 aa11.1□□□□□ -0.63
DDR1-240ENST00000454612 SYTL2Q9HCH5 934 aa11.1□□□□□ -0.63
DDR1-240ENST00000454612 TLR9Q9NR96 1032 aa11.1□□□□□ -0.63
DDR1-240ENST00000454612 SEPT3Q9UH03 358 aa11.1□□□□□ -0.63
DDR1-240ENST00000454612 PHF24Q9UPV7 400 aa11.1□□□□□ -0.63
DDR1-240ENST00000454612 DHRS12A0PJE2 317 aa11.1□□□□□ -0.63
DDR1-240ENST00000454612 SDHDO14521 159 aa11.1□□□□□ -0.63
DDR1-240ENST00000454612 SCAMP1O15126 338 aa11.1□□□□□ -0.63
DDR1-240ENST00000454612 H2AFYO75367 372 aaKnown RBP11.1□□□□□ -0.63
DDR1-240ENST00000454612 VEGFBP49765 207 aa11.1□□□□□ -0.63
DDR1-240ENST00000454612 CLCQ05315 142 aa11.1□□□□□ -0.63
DDR1-240ENST00000454612 SULT2A1Q06520 285 aa11.1□□□□□ -0.63
DDR1-240ENST00000454612 MADCAM1Q13477 382 aa11.1□□□□□ -0.63
DDR1-240ENST00000454612 NAB1Q13506 487 aa11.1□□□□□ -0.63
DDR1-240ENST00000454612 C17orf99Q6UX52 265 aa11.1□□□□□ -0.63
DDR1-240ENST00000454612 RTP4Q96DX8 246 aa11.1□□□□□ -0.63
DDR1-240ENST00000454612 PCDHGA4Q9Y5G9 962 aa11.1□□□□□ -0.63
DDR1-240ENST00000454612 K7ERQ8 282 aa11.1□□□□□ -0.63
DDR1-240ENST00000454612 STAU1O95793 577 aaKnown RBP11.1□□□□□ -0.63
DDR1-240ENST00000454612 CAPN1P07384 714 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms