RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 ERGIC3Q9Y282 383 aa13.79□□□□□ -0.2
UBE2D3-210ENST00000453744 SNPHO15079 494 aa13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 TRIP4Q15650 581 aaPredicted RBP13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 PLA2G4EQ3MJ16 856 aa13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 SDHAF4Q5VUM1 108 aa13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 ITIH5Q86UX2 942 aa13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 DCP1BQ8IZD4 617 aaKnown RBP13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 TRUB1Q8WWH5 349 aaKnown RBP13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 ZUFSPQ96AP4 578 aa13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 EXOC2Q96KP1 924 aa13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 MYRFLQ96LU7 910 aa13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 EXOSC4Q9NPD3 245 aaKnown RBP13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 ARMC1Q9NVT9 282 aa13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 POLG2Q9UHN1 485 aa13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 USP3Q9Y6I4 520 aa13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 INMTO95050 263 aa13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 APOA1P02647 267 aa13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 MAGEA12P43365 314 aa13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 PLA2G16P53816 162 aa13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 GALNT2Q10471 571 aa13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 PAGE3Q5JUK9 113 aa13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 ZFYVE19Q96K21 471 aa13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 B3GALT6Q96L58 329 aa13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 HNRNPABQ99729 332 aaKnown RBP13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 IGSF5Q9NSI5 407 aa13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 INTS10Q9NVR2 710 aaKnown RBP13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.78□□□□□ -0.23e-8■■■□□ 18.1
UBE2D3-210ENST00000453744 MAP10Q9P2G4 905 aa13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 M0QZ92 97 aa13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 RGS5O15539 181 aa13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 TPD52L2O43399 206 aaKnown RBP13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 OR4F21O95013 312 aa13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 MYL3P08590 195 aa13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 AGXTP21549 392 aa13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 KCNC1P48547 511 aa13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 ST13P50502 369 aaKnown RBP13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 CDKN2DP55273 166 aa13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 HERVK_113P63132 956 aa13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 PFKPQ01813 784 aa13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 ATP6AP1Q15904 470 aa13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 KIAA0930Q6ICG6 404 aaPredicted RBP13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 SCAIQ8N9R8 606 aa13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 PSD4Q8NDX1 1056 aa13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 OR2T12Q8NG77 320 aa13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 STAG3L4Q8TBR4 150 aa13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 MCOLN3Q8TDD5 553 aa13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 MTFMTQ96DP5 389 aaKnown RBP13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 ZHX1-C8orf76Q96EF9 292 aa13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 RPRD1AQ96P16 312 aaPredicted RBP13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 ERVK-6Q9BXR3 956 aa13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 UGT2B28Q9BY64 529 aa13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 ADAMTS10Q9H324 1103 aa13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 AMBNQ9NP70 447 aa13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 MARCH4Q9P2E8 410 aaPredicted RBP13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 GALPQ9UBC7 116 aa13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 TRMT6Q9UJA5 497 aaKnown RBP13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 POLR3HQ9Y535 204 aaPredicted RBP13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 PCDHB3Q9Y5E6 796 aa13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 COL16A1Q07092 1604 aaPredicted RBP13.78□□□□□ -0.2
UBE2D3-210ENST00000453744 NPEPPSL1A6NEC2 478 aa13.77□□□□□ -0.2
UBE2D3-210ENST00000453744 SHMT2P34897 504 aa13.77□□□□□ -0.2
UBE2D3-210ENST00000453744 SYT16Q17RD7 645 aa13.77□□□□□ -0.2
UBE2D3-210ENST00000453744 TIGD7Q6NT04 549 aaPredicted RBP13.77□□□□□ -0.2
UBE2D3-210ENST00000453744 MCFD2Q8NI22 146 aa13.77□□□□□ -0.2
UBE2D3-210ENST00000453744 SCAMP5Q8TAC9 235 aa13.77□□□□□ -0.2
UBE2D3-210ENST00000453744 FAM120BQ96EK7 910 aaKnown RBP13.77□□□□□ -0.2
UBE2D3-210ENST00000453744 SLC30A3Q99726 388 aa13.77□□□□□ -0.2
UBE2D3-210ENST00000453744 WDR12Q9GZL7 423 aaKnown RBP13.77□□□□□ -0.2
UBE2D3-210ENST00000453744 RERGLQ9H628 205 aa13.77□□□□□ -0.2
UBE2D3-210ENST00000453744 NANOGQ9H9S0 305 aa13.77□□□□□ -0.2
UBE2D3-210ENST00000453744 PRDM16Q9HAZ2 1276 aa13.77□□□□□ -0.2
UBE2D3-210ENST00000453744 CD300AQ9UGN4 299 aa13.77□□□□□ -0.2
UBE2D3-210ENST00000453744 ZNF112Q9UJU3 913 aa13.77□□□□□ -0.2
UBE2D3-210ENST00000453744 INVSQ9Y283 1065 aa13.77□□□□□ -0.2
UBE2D3-210ENST00000453744 DOCK5Q9H7D0 1870 aa13.77□□□□□ -0.2
UBE2D3-210ENST00000453744 IQCA1LA6NCM1 817 aa13.77□□□□□ -0.21
UBE2D3-210ENST00000453744 UBFD1O14562 309 aaKnown RBP13.77□□□□□ -0.21
UBE2D3-210ENST00000453744 ABCB7O75027 752 aa13.77□□□□□ -0.21
UBE2D3-210ENST00000453744 CNTN5O94779 1100 aa13.77□□□□□ -0.21
UBE2D3-210ENST00000453744 ANGPTL1O95841 491 aa13.77□□□□□ -0.21
UBE2D3-210ENST00000453744 MBL2P11226 248 aaPredicted RBP13.77□□□□□ -0.21
UBE2D3-210ENST00000453744 RENBPP51606 427 aa13.77□□□□□ -0.21
UBE2D3-210ENST00000453744 CYP4F2P78329 520 aa13.77□□□□□ -0.21
UBE2D3-210ENST00000453744 CYP4F3Q08477 520 aa13.77□□□□□ -0.21
UBE2D3-210ENST00000453744 SPCS2Q15005 226 aa13.77□□□□□ -0.21
UBE2D3-210ENST00000453744 TBPL2Q6SJ96 375 aa13.77□□□□□ -0.21
UBE2D3-210ENST00000453744 BTLAQ7Z6A9 289 aa13.77□□□□□ -0.21
UBE2D3-210ENST00000453744 C2CD4AQ8NCU7 369 aaPredicted RBP13.77□□□□□ -0.21
UBE2D3-210ENST00000453744 LPPQ93052 612 aa13.77□□□□□ -0.21
UBE2D3-210ENST00000453744 CORO1BQ9BR76 489 aa13.77□□□□□ -0.21
UBE2D3-210ENST00000453744 GSTO2Q9H4Y5 243 aa13.77□□□□□ -0.21
UBE2D3-210ENST00000453744 ABI2Q9NYB9 513 aaPredicted RBP13.77□□□□□ -0.21
UBE2D3-210ENST00000453744 C3orf18Q9UK00 162 aa13.77□□□□□ -0.21
UBE2D3-210ENST00000453744 TNPO2O14787 897 aaKnown RBP13.77□□□□□ -0.21
UBE2D3-210ENST00000453744 RAD51BO15315 384 aa13.77□□□□□ -0.21
UBE2D3-210ENST00000453744 CD3EAPO15446 510 aaKnown RBP13.77□□□□□ -0.21
UBE2D3-210ENST00000453744 BCAS1O75363 584 aaPredicted RBP13.77□□□□□ -0.21
UBE2D3-210ENST00000453744 SLC25A27O95847 323 aa13.77□□□□□ -0.21
UBE2D3-210ENST00000453744 C1RP00736 705 aa13.77□□□□□ -0.21
UBE2D3-210ENST00000453744 GPX3P22352 226 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms