RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 LRP8Q14114 963 aa7.8□□□□□ -1.16
LINC01961-201ENST00000449954 UGP2Q16851 508 aa7.8□□□□□ -1.16
LINC01961-201ENST00000449954 DUS1LQ6P1R4 473 aaKnown RBP7.8□□□□□ -1.16
LINC01961-201ENST00000449954 AVL9Q8NBF6 648 aa7.8□□□□□ -1.16
LINC01961-201ENST00000449954 PPP4R1Q8TF05 950 aa7.8□□□□□ -1.16
LINC01961-201ENST00000449954 FRMD8Q9BZ67 464 aaPredicted RBP7.8□□□□□ -1.16
LINC01961-201ENST00000449954 SIK2Q9H0K1 926 aa7.8□□□□□ -1.16
LINC01961-201ENST00000449954 THAP9Q9H5L6 903 aa7.8□□□□□ -1.16
LINC01961-201ENST00000449954 MMRN2Q9H8L6 949 aa7.8□□□□□ -1.16
LINC01961-201ENST00000449954 SLC39A2Q9NP94 309 aa7.8□□□□□ -1.16
LINC01961-201ENST00000449954 PCDH12Q9NPG4 1184 aa7.8□□□□□ -1.16
LINC01961-201ENST00000449954 ST7Q9NRC1 585 aa7.8□□□□□ -1.16
LINC01961-201ENST00000449954 OLAHQ9NV23 265 aa7.8□□□□□ -1.16
LINC01961-201ENST00000449954 RAB20Q9NX57 234 aa7.8□□□□□ -1.16
LINC01961-201ENST00000449954 COX16Q9P0S2 106 aa7.8□□□□□ -1.16
LINC01961-201ENST00000449954 SUFUQ9UMX1 484 aa7.8□□□□□ -1.16
LINC01961-201ENST00000449954 MFHAS1Q9Y4C4 1052 aa7.8□□□□□ -1.16
LINC01961-201ENST00000449954 CACNA1CQ13936 2221 aa7.79□□□□□ -1.16
LINC01961-201ENST00000449954 IGLV3-10A0A075B6K4 115 aa7.79□□□□□ -1.16
LINC01961-201ENST00000449954 TSPAN11A1L157 253 aa7.79□□□□□ -1.16
LINC01961-201ENST00000449954 C19orf84I3L1E1 186 aa7.79□□□□□ -1.16
LINC01961-201ENST00000449954 CCL21O00585 134 aa7.79□□□□□ -1.16
LINC01961-201ENST00000449954 CPNE3O75131 537 aaKnown RBP7.79□□□□□ -1.16
LINC01961-201ENST00000449954 TIAF1O95411 115 aa7.79□□□□□ -1.16
LINC01961-201ENST00000449954 CLDN14O95500 239 aa7.79□□□□□ -1.16
LINC01961-201ENST00000449954 CD160O95971 181 aa7.79□□□□□ -1.16
LINC01961-201ENST00000449954 IGSF6O95976 241 aa7.79□□□□□ -1.16
LINC01961-201ENST00000449954 IVLP07476 585 aa7.79□□□□□ -1.16
LINC01961-201ENST00000449954 RAB40ALP0C0E4 278 aa7.79□□□□□ -1.16
LINC01961-201ENST00000449954 ADCY8P40145 1251 aa7.79□□□□□ -1.16
LINC01961-201ENST00000449954 MAPK9P45984 424 aa7.79□□□□□ -1.16
LINC01961-201ENST00000449954 SMSP52788 366 aa7.79□□□□□ -1.16
LINC01961-201ENST00000449954 FOLH1Q04609 750 aa7.79□□□□□ -1.16
LINC01961-201ENST00000449954 NFATC2Q13469 925 aa7.79□□□□□ -1.16
LINC01961-201ENST00000449954 GRM3Q14832 879 aa7.79□□□□□ -1.16
LINC01961-201ENST00000449954 BRMS1LQ5PSV4 323 aa7.79□□□□□ -1.16
LINC01961-201ENST00000449954 PNCKQ6P2M8 343 aa7.79□□□□□ -1.16
LINC01961-201ENST00000449954 FAM199XQ6PEV8 388 aaPredicted RBP7.79□□□□□ -1.16
LINC01961-201ENST00000449954 BRAT1Q6PJG6 821 aa7.79□□□□□ -1.16
LINC01961-201ENST00000449954 PRSS42Q7Z5A4 293 aa7.79□□□□□ -1.16
LINC01961-201ENST00000449954 RAB43Q86YS6 212 aa7.79□□□□□ -1.16
LINC01961-201ENST00000449954 ZNF683Q8IZ20 524 aa7.79□□□□□ -1.16
LINC01961-201ENST00000449954 PDILTQ8N807 584 aa7.79□□□□□ -1.16
LINC01961-201ENST00000449954 BCORP1Q8N888 145 aa7.79□□□□□ -1.16
LINC01961-201ENST00000449954 ACBD4Q8NC06 268 aa7.79□□□□□ -1.16
LINC01961-201ENST00000449954 TFAP2BQ92481 460 aa7.79□□□□□ -1.16
LINC01961-201ENST00000449954 SEMA4DQ92854 862 aa7.79□□□□□ -1.16
LINC01961-201ENST00000449954 FER1L6-AS2Q96M78 137 aa7.79□□□□□ -1.16
LINC01961-201ENST00000449954 IP6K3Q96PC2 410 aa7.79□□□□□ -1.16
LINC01961-201ENST00000449954 OR2M4Q96R27 311 aa7.79□□□□□ -1.16
LINC01961-201ENST00000449954 TREX2Q9BQ50 279 aaPredicted RBP7.79□□□□□ -1.16
LINC01961-201ENST00000449954 PANK2Q9BZ23 570 aa7.79□□□□□ -1.16
LINC01961-201ENST00000449954 ENKD1Q9H0I2 346 aa7.79□□□□□ -1.16
LINC01961-201ENST00000449954 MAGEF1Q9HAY2 307 aa7.79□□□□□ -1.16
LINC01961-201ENST00000449954 RARRES3Q9UL19 164 aa7.79□□□□□ -1.16
LINC01961-201ENST00000449954 TCFL5Q9UL49 500 aa7.79□□□□□ -1.16
LINC01961-201ENST00000449954 ATP8A1Q9Y2Q0 1164 aa7.79□□□□□ -1.16
LINC01961-201ENST00000449954 ST14Q9Y5Y6 855 aa7.79□□□□□ -1.16
LINC01961-201ENST00000449954 TRGV8A0A0C4DH27 118 aa7.78□□□□□ -1.16
LINC01961-201ENST00000449954 FAM171A2A8MVW0 826 aa7.78□□□□□ -1.16
LINC01961-201ENST00000449954 J3QW42 95 aa7.78□□□□□ -1.16
LINC01961-201ENST00000449954 MASP2O00187 686 aa7.78□□□□□ -1.16
LINC01961-201ENST00000449954 PCDH17O14917 1159 aa7.78□□□□□ -1.16
LINC01961-201ENST00000449954 TEX33O43247 280 aa7.78□□□□□ -1.16
LINC01961-201ENST00000449954 STX10O60499 249 aa7.78□□□□□ -1.16
LINC01961-201ENST00000449954 BUB1BO60566 1050 aaPredicted RBP7.78□□□□□ -1.16
LINC01961-201ENST00000449954 RASSF9O75901 435 aa7.78□□□□□ -1.16
LINC01961-201ENST00000449954 GLI1P08151 1106 aa7.78□□□□□ -1.16
LINC01961-201ENST00000449954 ELFN1P0C7U0 828 aa7.78□□□□□ -1.16
LINC01961-201ENST00000449954 SLC2A4P14672 509 aa7.78□□□□□ -1.16
LINC01961-201ENST00000449954 TBXAS1P24557 533 aaPredicted RBP7.78□□□□□ -1.16
LINC01961-201ENST00000449954 CA7P43166 264 aa7.78□□□□□ -1.16
LINC01961-201ENST00000449954 KIR3DL1P43629 444 aa7.78□□□□□ -1.16
LINC01961-201ENST00000449954 SEPHS1P49903 392 aa7.78□□□□□ -1.16
LINC01961-201ENST00000449954 GFERP55789 205 aa7.78□□□□□ -1.16
LINC01961-201ENST00000449954 Q0VFX4 171 aa7.78□□□□□ -1.16
LINC01961-201ENST00000449954 CDC16Q13042 620 aa7.78□□□□□ -1.16
LINC01961-201ENST00000449954 NME3Q13232 169 aa7.78□□□□□ -1.16
LINC01961-201ENST00000449954 TUBB3Q13509 450 aa7.78□□□□□ -1.16
LINC01961-201ENST00000449954 ATP1A4Q13733 1029 aa7.78□□□□□ -1.16
LINC01961-201ENST00000449954 LONRF1Q17RB8 773 aa7.78□□□□□ -1.16
LINC01961-201ENST00000449954 CFAP58Q5T655 872 aa7.78□□□□□ -1.16
LINC01961-201ENST00000449954 ATXN7L2Q5T6C5 722 aaPredicted RBP7.78□□□□□ -1.16
LINC01961-201ENST00000449954 SLC9B2Q86UD5 537 aa7.78□□□□□ -1.16
LINC01961-201ENST00000449954 GALNT16Q8N428 558 aa7.78□□□□□ -1.16
LINC01961-201ENST00000449954 CASKIN2Q8WXE0 1202 aa7.78□□□□□ -1.16
LINC01961-201ENST00000449954 MR1Q95460 341 aa7.78□□□□□ -1.16
LINC01961-201ENST00000449954 ARSGQ96EG1 525 aa7.78□□□□□ -1.16
LINC01961-201ENST00000449954 CLIC6Q96NY7 704 aa7.78□□□□□ -1.16
LINC01961-201ENST00000449954 SLC2A13Q96QE2 648 aa7.78□□□□□ -1.16
LINC01961-201ENST00000449954 NCAPGQ9BPX3 1015 aa7.78□□□□□ -1.16
LINC01961-201ENST00000449954 C7orf25Q9BPX7 421 aa7.78□□□□□ -1.16
LINC01961-201ENST00000449954 TEX101Q9BY14 249 aa7.78□□□□□ -1.16
LINC01961-201ENST00000449954 NLNQ9BYT8 704 aa7.78□□□□□ -1.16
LINC01961-201ENST00000449954 TTYH3Q9C0H2 523 aa7.78□□□□□ -1.16
LINC01961-201ENST00000449954 KCTD10Q9H3F6 313 aa7.78□□□□□ -1.16
LINC01961-201ENST00000449954 ZNF552Q9H707 407 aaPredicted RBP7.78□□□□□ -1.16
LINC01961-201ENST00000449954 AKIRIN1Q9H9L7 192 aaPredicted RBP7.78□□□□□ -1.16
LINC01961-201ENST00000449954 WASH6PQ9NQA3 447 aa7.78□□□□□ -1.16
LINC01961-201ENST00000449954 SEMA3GQ9NS98 782 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms