RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 RNGTTO60942 597 aaKnown RBP19.11■□□□□ 0.65
RPS28-202ENST00000449223 DCNP07585 359 aaKnown RBP19.11■□□□□ 0.65
RPS28-202ENST00000449223 AOC1P19801 751 aa19.11■□□□□ 0.65
RPS28-202ENST00000449223 HOXA6P31267 233 aa19.11■□□□□ 0.65
RPS28-202ENST00000449223 ACSL1P33121 698 aa19.11■□□□□ 0.65
RPS28-202ENST00000449223 CCR3P51677 355 aa19.11■□□□□ 0.65
RPS28-202ENST00000449223 ZKSCAN8Q15776 578 aaPredicted RBP19.11■□□□□ 0.65
RPS28-202ENST00000449223 SETMARQ53H47 684 aaPredicted RBP19.11■□□□□ 0.65
RPS28-202ENST00000449223 TAS2R42Q7RTR8 314 aa19.11■□□□□ 0.65
RPS28-202ENST00000449223 PNPLA1Q8N8W4 532 aa19.11■□□□□ 0.65
RPS28-202ENST00000449223 BTN2A2Q8WVV5 523 aa19.11■□□□□ 0.65
RPS28-202ENST00000449223 SSU72Q9NP77 194 aaKnown RBP19.11■□□□□ 0.65
RPS28-202ENST00000449223 PCDHB1Q9Y5F3 818 aa19.11■□□□□ 0.65
RPS28-202ENST00000449223 DOCK9Q9BZ29 2069 aa19.11■□□□□ 0.65
RPS28-202ENST00000449223 TBC1D3DA0A087WVF3 549 aa19.1■□□□□ 0.65
RPS28-202ENST00000449223 TBC1D3IA0A087WXS9 549 aa19.1■□□□□ 0.65
RPS28-202ENST00000449223 TBC1D3EA0A087X179 549 aa19.1■□□□□ 0.65
RPS28-202ENST00000449223 TBC1D3KA0A087X1G2 549 aa19.1■□□□□ 0.65
RPS28-202ENST00000449223 FAM95CA0A1B0GW59 222 aa19.1■□□□□ 0.65
RPS28-202ENST00000449223 A0A1W2PQU0 124 aa19.1■□□□□ 0.65
RPS28-202ENST00000449223 TBC1D3FA6NER0 549 aaPredicted RBP19.1■□□□□ 0.65
RPS28-202ENST00000449223 TBC1D3LB9A6J9 549 aa19.1■□□□□ 0.65
RPS28-202ENST00000449223 PRMT5O14744 637 aaPredicted RBP19.1■□□□□ 0.65
RPS28-202ENST00000449223 LATO43561 262 aa19.1■□□□□ 0.65
RPS28-202ENST00000449223 ESR1P03372 595 aa19.1■□□□□ 0.65
RPS28-202ENST00000449223 F7P08709 466 aaPredicted RBP19.1■□□□□ 0.65
RPS28-202ENST00000449223 TBC1D3HP0C7X1 549 aa19.1■□□□□ 0.65
RPS28-202ENST00000449223 ZNF7P17097 686 aaPredicted RBP19.1■□□□□ 0.65
RPS28-202ENST00000449223 CCNFP41002 786 aa19.1■□□□□ 0.65
RPS28-202ENST00000449223 NSG1P42857 185 aa19.1■□□□□ 0.65
RPS28-202ENST00000449223 CXCL12P48061 93 aa19.1■□□□□ 0.65
RPS28-202ENST00000449223 POU4F1Q01851 419 aa19.1■□□□□ 0.65
RPS28-202ENST00000449223 FGL2Q14314 439 aa19.1■□□□□ 0.65
RPS28-202ENST00000449223 TBC1D3GQ6DHY5 549 aa19.1■□□□□ 0.65
RPS28-202ENST00000449223 TBC1D3CQ6IPX1 549 aa19.1■□□□□ 0.65
RPS28-202ENST00000449223 ZNF549Q6P9A3 640 aa19.1■□□□□ 0.65
RPS28-202ENST00000449223 ADAMTSL4Q6UY14 1074 aa19.1■□□□□ 0.65
RPS28-202ENST00000449223 TBC1D3Q8IZP1 549 aaPredicted RBP19.1■□□□□ 0.65
RPS28-202ENST00000449223 PGBD3Q8N328 593 aa19.1■□□□□ 0.65
RPS28-202ENST00000449223 HEXDCQ8WVB3 486 aa19.1■□□□□ 0.65
RPS28-202ENST00000449223 GLYATL1Q969I3 302 aa19.1■□□□□ 0.65
RPS28-202ENST00000449223 LENG8Q96PV6 779 aaPredicted RBP19.1■□□□□ 0.65
RPS28-202ENST00000449223 COPS8Q99627 209 aa19.1■□□□□ 0.65
RPS28-202ENST00000449223 AARSD1Q9BTE6 412 aaKnown RBP19.1■□□□□ 0.65
RPS28-202ENST00000449223 C1QTNF7Q9BXJ2 289 aa19.1■□□□□ 0.65
RPS28-202ENST00000449223 SLC17A9Q9BYT1 436 aa19.1■□□□□ 0.65
RPS28-202ENST00000449223 WSB2Q9NYS7 404 aaPredicted RBP19.1■□□□□ 0.65
RPS28-202ENST00000449223 A0A1W2PPM1 405 aa19.1■□□□□ 0.65
RPS28-202ENST00000449223 K7ESF4 209 aa19.1■□□□□ 0.65
RPS28-202ENST00000449223 MT-ND3P03897 115 aa19.1■□□□□ 0.65
RPS28-202ENST00000449223 ABCG1P45844 678 aa19.1■□□□□ 0.65
RPS28-202ENST00000449223 SERPINB8P50452 374 aa19.1■□□□□ 0.65
RPS28-202ENST00000449223 MAGOHP61326 146 aaKnown RBP19.1■□□□□ 0.65
RPS28-202ENST00000449223 SLC18A2Q05940 514 aa19.1■□□□□ 0.65
RPS28-202ENST00000449223 WSCD2Q2TBF2 565 aa19.1■□□□□ 0.65
RPS28-202ENST00000449223 LDLRAP1Q5SW96 308 aa19.1■□□□□ 0.65
RPS28-202ENST00000449223 GPRC6AQ5T6X5 926 aa19.1■□□□□ 0.65
RPS28-202ENST00000449223 KCTD16Q68DU8 428 aa19.1■□□□□ 0.65
RPS28-202ENST00000449223 FAM45BPQ6NSW5 357 aa19.1■□□□□ 0.65
RPS28-202ENST00000449223 SRRM1Q8IYB3 904 aaKnown RBP19.1■□□□□ 0.65
RPS28-202ENST00000449223 PELI3Q8N2H9 469 aa19.1■□□□□ 0.65
RPS28-202ENST00000449223 TP53I13Q8NBR0 393 aaPredicted RBP19.1■□□□□ 0.65
RPS28-202ENST00000449223 DENND6BQ8NEG7 585 aa19.1■□□□□ 0.65
RPS28-202ENST00000449223 FAM45AQ8TCE6 357 aa19.1■□□□□ 0.65
RPS28-202ENST00000449223 CENPTQ96BT3 561 aa19.1■□□□□ 0.65
RPS28-202ENST00000449223 ALKBH8Q96BT7 664 aaKnown RBP19.1■□□□□ 0.65
RPS28-202ENST00000449223 ATXN7L3BQ96GX2 97 aa19.1■□□□□ 0.65
RPS28-202ENST00000449223 SERAC1Q96JX3 654 aa19.1■□□□□ 0.65
RPS28-202ENST00000449223 MKS1Q9NXB0 559 aa19.1■□□□□ 0.65
RPS28-202ENST00000449223 CNOT6Q9ULM6 557 aaKnown RBP19.1■□□□□ 0.65
RPS28-202ENST00000449223 CRYL1Q9Y2S2 319 aa19.1■□□□□ 0.65
RPS28-202ENST00000449223 PIKFYVEQ9Y2I7 2098 aa19.09■□□□□ 0.65
RPS28-202ENST00000449223 TTC28Q96AY4 2481 aa19.09■□□□□ 0.65
RPS28-202ENST00000449223 TPP1O14773 563 aa19.09■□□□□ 0.65
RPS28-202ENST00000449223 OR1I1O60431 355 aa19.09■□□□□ 0.65
RPS28-202ENST00000449223 SEMA4FO95754 770 aa19.09■□□□□ 0.65
RPS28-202ENST00000449223 PDGFBP01127 241 aaPredicted RBP19.09■□□□□ 0.65
RPS28-202ENST00000449223 TRIM23P36406 574 aa19.09■□□□□ 0.65
RPS28-202ENST00000449223 PPP2CBP62714 309 aa19.09■□□□□ 0.65
RPS28-202ENST00000449223 PPP2CAP67775 309 aa19.09■□□□□ 0.65
RPS28-202ENST00000449223 B4GALNT1Q00973 533 aa19.09■□□□□ 0.65
RPS28-202ENST00000449223 LRRC14Q15048 493 aa19.09■□□□□ 0.65
RPS28-202ENST00000449223 RBM20Q5T481 1227 aaKnown RBP19.09■□□□□ 0.65
RPS28-202ENST00000449223 PNCKQ6P2M8 343 aa19.09■□□□□ 0.65
RPS28-202ENST00000449223 CCDC91Q7Z6B0 441 aa19.09■□□□□ 0.65
RPS28-202ENST00000449223 FAM124AQ86V42 546 aa19.09■□□□□ 0.65
RPS28-202ENST00000449223 PHYKPLQ8IUZ5 450 aa19.09■□□□□ 0.65
RPS28-202ENST00000449223 ACVR1CQ8NER5 493 aa19.09■□□□□ 0.65
RPS28-202ENST00000449223 KCNJ9Q92806 393 aa19.09■□□□□ 0.65
RPS28-202ENST00000449223 KLF6Q99612 283 aaPredicted RBP19.09■□□□□ 0.65
RPS28-202ENST00000449223 FAM126AQ9BYI3 521 aaPredicted RBP19.09■□□□□ 0.65
RPS28-202ENST00000449223 POPDC3Q9HBV1 291 aa19.09■□□□□ 0.65
RPS28-202ENST00000449223 SNX15Q9NRS6 342 aa19.09■□□□□ 0.65
RPS28-202ENST00000449223 MED16Q9Y2X0 877 aa19.09■□□□□ 0.65
RPS28-202ENST00000449223 VWA7Q9Y334 891 aa19.09■□□□□ 0.65
RPS28-202ENST00000449223 IGHV1OR15-9A0A0B4J2B8 117 aa19.08■□□□□ 0.64
RPS28-202ENST00000449223 CCDC163A0A0D9SF12 145 aa19.08■□□□□ 0.64
RPS28-202ENST00000449223 GOLGA8CPA6NN73 597 aa19.08■□□□□ 0.64
RPS28-202ENST00000449223 H3BMM5 538 aa19.08■□□□□ 0.64
RPS28-202ENST00000449223 K7ESM1 405 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms