RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 UGT1A10Q9HAW8 530 aa14.69□□□□□ -0.06
HDAC4-204ENST00000446876 UGT1A8Q9HAW9 530 aa14.69□□□□□ -0.06
HDAC4-204ENST00000446876 ETNK1Q9HBU6 452 aa14.69□□□□□ -0.06
HDAC4-204ENST00000446876 EVA1BQ9NVM1 165 aa14.69□□□□□ -0.06
HDAC4-204ENST00000446876 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.69□□□□□ -0.065e-7■■■■□ 25.5
HDAC4-204ENST00000446876 NCKIPSDQ9NZQ3 722 aa14.69□□□□□ -0.06
HDAC4-204ENST00000446876 VPS18Q9P253 973 aa14.69□□□□□ -0.06
HDAC4-204ENST00000446876 FKBPLQ9UIM3 349 aa14.69□□□□□ -0.06
HDAC4-204ENST00000446876 PKP3Q9Y446 797 aa14.69□□□□□ -0.06
HDAC4-204ENST00000446876 JRKLQ9Y4A0 524 aa14.69□□□□□ -0.06
HDAC4-204ENST00000446876 CEP295Q9C0D2 2601 aa14.69□□□□□ -0.06
HDAC4-204ENST00000446876 TPRP12270 2363 aaKnown RBP14.68□□□□□ -0.06
HDAC4-204ENST00000446876 GLYATL1P3A0A0U1RQE8 302 aa14.68□□□□□ -0.06
HDAC4-204ENST00000446876 CCL22O00626 93 aa14.68□□□□□ -0.06
HDAC4-204ENST00000446876 STX7O15400 261 aaKnown RBP14.68□□□□□ -0.06
HDAC4-204ENST00000446876 AP2A1O95782 977 aa14.68□□□□□ -0.06
HDAC4-204ENST00000446876 GP1BAP07359 652 aa14.68□□□□□ -0.06
HDAC4-204ENST00000446876 JUPP14923 745 aa14.68□□□□□ -0.06
HDAC4-204ENST00000446876 LPOP22079 712 aaPredicted RBP14.68□□□□□ -0.06
HDAC4-204ENST00000446876 STIP1P31948 543 aaKnown RBP14.68□□□□□ -0.06
HDAC4-204ENST00000446876 TMPRSS15P98073 1019 aa14.68□□□□□ -0.06
HDAC4-204ENST00000446876 E2F1Q01094 437 aa14.68□□□□□ -0.06
HDAC4-204ENST00000446876 TAF1AQ15573 450 aaPredicted RBP14.68□□□□□ -0.06
HDAC4-204ENST00000446876 PLA2G4EQ3MJ16 856 aa14.68□□□□□ -0.06
HDAC4-204ENST00000446876 PDPK2PQ6A1A2 396 aa14.68□□□□□ -0.06
HDAC4-204ENST00000446876 CRTC3Q6UUV7 619 aa14.68□□□□□ -0.06
HDAC4-204ENST00000446876 CHST15Q7LFX5 561 aaPredicted RBP14.68□□□□□ -0.06
HDAC4-204ENST00000446876 ADGRG6Q86SQ4 1221 aa14.68□□□□□ -0.06
HDAC4-204ENST00000446876 TMPRSS12Q86WS5 348 aa14.68□□□□□ -0.06
HDAC4-204ENST00000446876 PHYKPLQ8IUZ5 450 aa14.68□□□□□ -0.06
HDAC4-204ENST00000446876 PRELID2Q8N945 189 aa14.68□□□□□ -0.06
HDAC4-204ENST00000446876 CCDC89Q8N998 374 aa14.68□□□□□ -0.06
HDAC4-204ENST00000446876 COG1Q8WTW3 980 aa14.68□□□□□ -0.06
HDAC4-204ENST00000446876 ZDHHC1Q8WTX9 485 aa14.68□□□□□ -0.06
HDAC4-204ENST00000446876 CCDC3Q9BQI4 270 aa14.68□□□□□ -0.06
HDAC4-204ENST00000446876 SYNDIG1Q9H7V2 258 aa14.68□□□□□ -0.06
HDAC4-204ENST00000446876 ARNT2Q9HBZ2 717 aa14.68□□□□□ -0.06
HDAC4-204ENST00000446876 KCNK6Q9Y257 313 aa14.68□□□□□ -0.06
HDAC4-204ENST00000446876 FRYQ5TBA9 3013 aa14.68□□□□□ -0.06
HDAC4-204ENST00000446876 CCDC78A2IDD5 438 aa14.67□□□□□ -0.06
HDAC4-204ENST00000446876 C2orf81A6NN90 581 aa14.67□□□□□ -0.06
HDAC4-204ENST00000446876 GRID2O43424 1007 aa14.67□□□□□ -0.06
HDAC4-204ENST00000446876 KIF5CO60282 957 aa14.67□□□□□ -0.06
HDAC4-204ENST00000446876 NUAK1O60285 661 aa14.67□□□□□ -0.06
HDAC4-204ENST00000446876 EML2O95834 649 aa14.67□□□□□ -0.06
HDAC4-204ENST00000446876 MT-CO3P00414 261 aa14.67□□□□□ -0.06
HDAC4-204ENST00000446876 CDK4P11802 303 aa14.67□□□□□ -0.06
HDAC4-204ENST00000446876 ACP5P13686 325 aa14.67□□□□□ -0.06
HDAC4-204ENST00000446876 RPL22P35268 128 aaKnown RBP14.67□□□□□ -0.06
HDAC4-204ENST00000446876 GRIA1P42261 906 aa14.67□□□□□ -0.06
HDAC4-204ENST00000446876 ZNF140P52738 457 aaPredicted RBP14.67□□□□□ -0.06
HDAC4-204ENST00000446876 TARDBPQ13148 414 aaKnown RBP eCLIP14.67□□□□□ -0.061e-6■■■■□ 25.7
HDAC4-204ENST00000446876 SEPT6Q14141 434 aa14.67□□□□□ -0.06
HDAC4-204ENST00000446876 POU6F1Q14863 301 aa14.67□□□□□ -0.06
HDAC4-204ENST00000446876 C14orf28Q4W4Y0 310 aa14.67□□□□□ -0.06
HDAC4-204ENST00000446876 OGFOD3Q6PK18 319 aa14.67□□□□□ -0.06
HDAC4-204ENST00000446876 RASGEF1CQ8N431 466 aa14.67□□□□□ -0.06
HDAC4-204ENST00000446876 OR52K1Q8NGK4 314 aa14.67□□□□□ -0.06
HDAC4-204ENST00000446876 GDAP1Q8TB36 358 aa14.67□□□□□ -0.06
HDAC4-204ENST00000446876 BRSK1Q8TDC3 778 aa14.67□□□□□ -0.06
HDAC4-204ENST00000446876 MAIP1Q8WWC4 291 aa14.67□□□□□ -0.06
HDAC4-204ENST00000446876 NAT6Q93015 286 aa14.67□□□□□ -0.06
HDAC4-204ENST00000446876 VPS35Q96QK1 796 aa14.67□□□□□ -0.06
HDAC4-204ENST00000446876 ABCG4Q9H172 646 aa14.67□□□□□ -0.06
HDAC4-204ENST00000446876 TRIM39Q9HCM9 518 aa14.67□□□□□ -0.06
HDAC4-204ENST00000446876 RAB6BQ9NRW1 208 aa14.67□□□□□ -0.06
HDAC4-204ENST00000446876 RNF215Q9Y6U7 377 aa14.67□□□□□ -0.06
HDAC4-204ENST00000446876 ACACBO00763 2458 aa14.67□□□□□ -0.06
HDAC4-204ENST00000446876 MAP1BP46821 2468 aaKnown RBP14.67□□□□□ -0.06
HDAC4-204ENST00000446876 LDB2O43679 373 aa14.66□□□□□ -0.06
HDAC4-204ENST00000446876 PRAMEF1O95521 474 aa14.66□□□□□ -0.06
HDAC4-204ENST00000446876 ECEL1O95672 775 aa14.66□□□□□ -0.06
HDAC4-204ENST00000446876 ACTN2P35609 894 aa14.66□□□□□ -0.06
HDAC4-204ENST00000446876 FDFT1P37268 417 aa14.66□□□□□ -0.06
HDAC4-204ENST00000446876 LMAN1P49257 510 aa14.66□□□□□ -0.06
HDAC4-204ENST00000446876 CAMK2BQ13554 666 aa14.66□□□□□ -0.06
HDAC4-204ENST00000446876 HLTFQ14527 1009 aaKnown RBP eCLIP14.66□□□□□ -0.06
HDAC4-204ENST00000446876 CERCAMQ5T4B2 595 aa14.66□□□□□ -0.06
HDAC4-204ENST00000446876 CDCP2Q5VXM1 449 aa14.66□□□□□ -0.06
HDAC4-204ENST00000446876 TTC27Q6P3X3 843 aa14.66□□□□□ -0.06
HDAC4-204ENST00000446876 DRICH1Q6PGQ1 229 aaPredicted RBP14.66□□□□□ -0.06
HDAC4-204ENST00000446876 GSTA5Q7RTV2 222 aa14.66□□□□□ -0.06
HDAC4-204ENST00000446876 NAGSQ8N159 534 aa14.66□□□□□ -0.06
HDAC4-204ENST00000446876 Q8N9G6 341 aaPredicted RBP14.66□□□□□ -0.06
HDAC4-204ENST00000446876 NAT14Q8WUY8 206 aa14.66□□□□□ -0.06
HDAC4-204ENST00000446876 LRRC45Q96CN5 670 aa14.66□□□□□ -0.06
HDAC4-204ENST00000446876 PBKQ96KB5 322 aa14.66□□□□□ -0.06
HDAC4-204ENST00000446876 DNAJC1Q96KC8 554 aaKnown RBP14.66□□□□□ -0.06
HDAC4-204ENST00000446876 OSBPL9Q96SU4 736 aa14.66□□□□□ -0.06
HDAC4-204ENST00000446876 AP1M1Q9BXS5 423 aa14.66□□□□□ -0.06
HDAC4-204ENST00000446876 PAK5Q9P286 719 aa14.66□□□□□ -0.06
HDAC4-204ENST00000446876 CLCA2Q9UQC9 943 aa14.66□□□□□ -0.06
HDAC4-204ENST00000446876 DRG1Q9Y295 367 aaKnown RBP14.66□□□□□ -0.06
HDAC4-204ENST00000446876 ZKSCAN5Q9Y2L8 839 aa14.66□□□□□ -0.06
HDAC4-204ENST00000446876 PCDHB1Q9Y5F3 818 aa14.66□□□□□ -0.06
HDAC4-204ENST00000446876 KNTC1P50748 2209 aa14.66□□□□□ -0.06
HDAC4-204ENST00000446876 KIF26BQ2KJY2 2108 aa14.65□□□□□ -0.06
HDAC4-204ENST00000446876 TRBV23OR9-2A0A075B6M9 112 aa14.65□□□□□ -0.06
HDAC4-204ENST00000446876 E7EVH7 732 aa14.65□□□□□ -0.06
HDAC4-204ENST00000446876 ZNF185O15231 689 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms