RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	MEP1A	Q16819	746 aa		12.47	□□□□□ -0.41
DDR1-238	ENST00000446312	RNF19B	Q6ZMZ0	732 aa		12.47	□□□□□ -0.41
DDR1-238	ENST00000446312	TUBA1A	Q71U36	451 aa		12.47	□□□□□ -0.41
DDR1-238	ENST00000446312	LYSMD3	Q7Z3D4	306 aa		12.47	□□□□□ -0.41
DDR1-238	ENST00000446312	ISCA2	Q86U28	154 aa		12.47	□□□□□ -0.41
DDR1-238	ENST00000446312	ERI1	Q8IV48	349 aa	Known RBP	12.47	□□□□□ -0.41
DDR1-238	ENST00000446312	CPSF7	Q8N684	471 aa	Known RBP	12.47	□□□□□ -0.41
DDR1-238	ENST00000446312	FNDC5	Q8NAU1	212 aa		12.47	□□□□□ -0.41
DDR1-238	ENST00000446312	PPTC7	Q8NI37	304 aa		12.47	□□□□□ -0.41
DDR1-238	ENST00000446312	NCLN	Q969V3	563 aa		12.47	□□□□□ -0.41
DDR1-238	ENST00000446312	AURKB	Q96GD4	344 aa	Predicted RBP	12.47	□□□□□ -0.41
DDR1-238	ENST00000446312	RANBP9	Q96S59	729 aa		12.47	□□□□□ -0.41
DDR1-238	ENST00000446312	SEMA3C	Q99985	751 aa		12.47	□□□□□ -0.41
DDR1-238	ENST00000446312	TBC1D13	Q9NVG8	400 aa		12.47	□□□□□ -0.41
DDR1-238	ENST00000446312	TRHDE	Q9UKU6	1024 aa		12.47	□□□□□ -0.41
DDR1-238	ENST00000446312	RNF112	Q9ULX5	631 aa		12.47	□□□□□ -0.41
DDR1-238	ENST00000446312	AAR2	Q9Y312	384 aa	Known RBP	12.47	□□□□□ -0.41
DDR1-238	ENST00000446312	PCDHGA3	Q9Y5H0	932 aa		12.47	□□□□□ -0.41
DDR1-238	ENST00000446312	BTBD19	C9JJ37	291 aa		12.47	□□□□□ -0.41
DDR1-238	ENST00000446312	BTN3A1	O00481	513 aa		12.47	□□□□□ -0.41
DDR1-238	ENST00000446312	DLGAP1	O14490	977 aa		12.47	□□□□□ -0.41
DDR1-238	ENST00000446312	NOL3	O60936	208 aa	Known RBP	12.47	□□□□□ -0.41
DDR1-238	ENST00000446312	GOT2	P00505	430 aa	Known RBP	12.47	□□□□□ -0.41
DDR1-238	ENST00000446312	TCF3	P15923	654 aa		12.47	□□□□□ -0.41
DDR1-238	ENST00000446312	SHMT2	P34897	504 aa		12.47	□□□□□ -0.41
DDR1-238	ENST00000446312	SERPINH1	P50454	418 aa	Known RBP	12.47	□□□□□ -0.41
DDR1-238	ENST00000446312	PRKAA2	P54646	552 aa		12.47	□□□□□ -0.41
DDR1-238	ENST00000446312	MLLT10	P55197	1068 aa		12.47	□□□□□ -0.41
DDR1-238	ENST00000446312	PGS1	Q32NB8	556 aa		12.47	□□□□□ -0.41
DDR1-238	ENST00000446312	PRR23C	Q6ZRP0	262 aa		12.47	□□□□□ -0.41
DDR1-238	ENST00000446312	ERO1B	Q86YB8	467 aa		12.47	□□□□□ -0.41
DDR1-238	ENST00000446312	SLC22A15	Q8IZD6	547 aa		12.47	□□□□□ -0.41
DDR1-238	ENST00000446312	TTC39C	Q8N584	583 aa		12.47	□□□□□ -0.41
DDR1-238	ENST00000446312	GOLM1	Q8NBJ4	401 aa		12.47	□□□□□ -0.41
DDR1-238	ENST00000446312	PCYOX1L	Q8NBM8	494 aa		12.47	□□□□□ -0.41
DDR1-238	ENST00000446312	NPLOC4	Q8TAT6	608 aa		12.47	□□□□□ -0.41
DDR1-238	ENST00000446312	TFAP2C	Q92754	450 aa		12.47	□□□□□ -0.41
DDR1-238	ENST00000446312	CHID1	Q9BWS9	393 aa		12.47	□□□□□ -0.41
DDR1-238	ENST00000446312	AGO3	Q9H9G7	860 aa	Known RBP	12.47	□□□□□ -0.41
DDR1-238	ENST00000446312	KIAA1522	Q9P206	1035 aa	Predicted RBP	12.47	□□□□□ -0.41
DDR1-238	ENST00000446312	ANKRD6	Q9Y2G4	727 aa		12.47	□□□□□ -0.41
DDR1-238	ENST00000446312		A0A087WXM4	84 aa		12.46	□□□□□ -0.41
DDR1-238	ENST00000446312	MAGEB16	A2A368	324 aa		12.46	□□□□□ -0.41
DDR1-238	ENST00000446312	KRT87P	A6NCN2	255 aa		12.46	□□□□□ -0.41
DDR1-238	ENST00000446312	AZIN1	O14977	448 aa		12.46	□□□□□ -0.41
DDR1-238	ENST00000446312	SYNCRIP	O60506	623 aa	Known RBP	12.46	□□□□□ -0.41
DDR1-238	ENST00000446312	ANXA9	O76027	345 aa		12.46	□□□□□ -0.41
DDR1-238	ENST00000446312	SLC6A2	P23975	617 aa		12.46	□□□□□ -0.41
DDR1-238	ENST00000446312	HSPA13	P48723	471 aa		12.46	□□□□□ -0.41
DDR1-238	ENST00000446312	ACADVL	P49748	655 aa		12.46	□□□□□ -0.41
DDR1-238	ENST00000446312	BMX	P51813	675 aa		12.46	□□□□□ -0.41
DDR1-238	ENST00000446312	ADAM17	P78536	824 aa		12.46	□□□□□ -0.41
DDR1-238	ENST00000446312	SPIDR	Q14159	915 aa		12.46	□□□□□ -0.41
DDR1-238	ENST00000446312	INPP5A	Q14642	412 aa		12.46	□□□□□ -0.41
DDR1-238	ENST00000446312	UBXN11	Q5T124	520 aa		12.46	□□□□□ -0.41
DDR1-238	ENST00000446312	ERMP1	Q7Z2K6	904 aa		12.46	□□□□□ -0.41
DDR1-238	ENST00000446312	PELI3	Q8N2H9	469 aa		12.46	□□□□□ -0.41
DDR1-238	ENST00000446312	GPRC5A	Q8NFJ5	357 aa		12.46	□□□□□ -0.41
DDR1-238	ENST00000446312	LRRC58	Q96CX6	371 aa		12.46	□□□□□ -0.41
DDR1-238	ENST00000446312	SLC10A4	Q96EP9	437 aa		12.46	□□□□□ -0.41
DDR1-238	ENST00000446312	SIAE	Q9HAT2	523 aa		12.46	□□□□□ -0.41
DDR1-238	ENST00000446312	IFT80	Q9P2H3	777 aa	Predicted RBP	12.46	□□□□□ -0.41
DDR1-238	ENST00000446312	SUCO	Q9UBS9	1254 aa	Known RBP	12.46	□□□□□ -0.41
DDR1-238	ENST00000446312	POLG2	Q9UHN1	485 aa		12.46	□□□□□ -0.41
DDR1-238	ENST00000446312	DOCK3	Q8IZD9	2030 aa		12.46	□□□□□ -0.42
DDR1-238	ENST00000446312	DNAJC25-GNG10	A0A024R161	153 aa		12.46	□□□□□ -0.42
DDR1-238	ENST00000446312	CCDC162P	A2VCL2	907 aa		12.46	□□□□□ -0.42
DDR1-238	ENST00000446312	SLCO1B7	G3V0H7	640 aa		12.46	□□□□□ -0.42
DDR1-238	ENST00000446312	FZD9	O00144	591 aa		12.46	□□□□□ -0.42
DDR1-238	ENST00000446312	PDHX	O00330	501 aa		12.46	□□□□□ -0.42
DDR1-238	ENST00000446312	AP1G1	O43747	822 aa		12.46	□□□□□ -0.42
DDR1-238	ENST00000446312	XPNPEP2	O43895	674 aa		12.46	□□□□□ -0.42
DDR1-238	ENST00000446312	FUCA1	P04066	466 aa		12.46	□□□□□ -0.42
DDR1-238	ENST00000446312	RAD23A	P54725	363 aa		12.46	□□□□□ -0.42
DDR1-238	ENST00000446312	ZNF678	Q5SXM1	525 aa		12.46	□□□□□ -0.42
DDR1-238	ENST00000446312	NANOGP8	Q6NSW7	305 aa		12.46	□□□□□ -0.42
DDR1-238	ENST00000446312	LINC00523	Q86TU6	105 aa		12.46	□□□□□ -0.42
DDR1-238	ENST00000446312	GPR180	Q86V85	440 aa		12.46	□□□□□ -0.42
DDR1-238	ENST00000446312	LSR	Q86X29	649 aa	Predicted RBP	12.46	□□□□□ -0.42
DDR1-238	ENST00000446312	CAMK1D	Q8IU85	385 aa		12.46	□□□□□ -0.42
DDR1-238	ENST00000446312	KIAA2013	Q8IYS2	634 aa		12.46	□□□□□ -0.42
DDR1-238	ENST00000446312	OR6K2	Q8NGY2	324 aa		12.46	□□□□□ -0.42
DDR1-238	ENST00000446312	HPS1	Q92902	700 aa		12.46	□□□□□ -0.42
DDR1-238	ENST00000446312	SLC30A3	Q99726	388 aa		12.46	□□□□□ -0.42
DDR1-238	ENST00000446312	NPL	Q9BXD5	320 aa	Predicted RBP	12.46	□□□□□ -0.42
DDR1-238	ENST00000446312	TDRD1	Q9BXT4	1180 aa	Known RBP	12.46	□□□□□ -0.42
DDR1-238	ENST00000446312	RPF2	Q9H7B2	306 aa	Known RBP	12.46	□□□□□ -0.42
DDR1-238	ENST00000446312	AFF4	Q9UHB7	1163 aa	Known RBP	12.46	□□□□□ -0.42
DDR1-238	ENST00000446312	EIF2B4	Q9UI10	523 aa	Known RBP	12.46	□□□□□ -0.42
DDR1-238	ENST00000446312	LCT	P09848	1927 aa		12.46	□□□□□ -0.42
DDR1-238	ENST00000446312		A0A0G2JLL6	359 aa	Predicted RBP	12.45	□□□□□ -0.42
DDR1-238	ENST00000446312	TNFRSF10A	O00220	468 aa		12.45	□□□□□ -0.42
DDR1-238	ENST00000446312	TLR5	O60602	858 aa		12.45	□□□□□ -0.42
DDR1-238	ENST00000446312	OR4F21	O95013	312 aa		12.45	□□□□□ -0.42
DDR1-238	ENST00000446312	ALB	P02768	609 aa		12.45	□□□□□ -0.42
DDR1-238	ENST00000446312	GDF5	P43026	501 aa		12.45	□□□□□ -0.42
DDR1-238	ENST00000446312	SPESP1	Q6UW49	350 aa		12.45	□□□□□ -0.42
DDR1-238	ENST00000446312	PRRT2	Q7Z6L0	340 aa	Predicted RBP	12.45	□□□□□ -0.42
DDR1-238	ENST00000446312	ANKRD46	Q86W74	232 aa		12.45	□□□□□ -0.42
DDR1-238	ENST00000446312	PHACTR4	Q8IZ21	702 aa		12.45	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms