RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 C19orf60Q96EN9 201 aa16.7■□□□□ 0.26
LAPTM4B-201ENST00000445593 FAM210AQ96ND0 272 aa16.7■□□□□ 0.26
LAPTM4B-201ENST00000445593 ACOX2Q99424 681 aa16.7■□□□□ 0.26
LAPTM4B-201ENST00000445593 HERC2P3Q9BVR0 1158 aa16.7■□□□□ 0.26
LAPTM4B-201ENST00000445593 GMPR2Q9P2T1 348 aaKnown RBP16.7■□□□□ 0.26
LAPTM4B-201ENST00000445593 ANGPTL2Q9UKU9 493 aa16.7■□□□□ 0.26
LAPTM4B-201ENST00000445593 CHD9Q3L8U1 2897 aa16.7■□□□□ 0.26
LAPTM4B-201ENST00000445593 GREM1O60565 184 aa16.7■□□□□ 0.26
LAPTM4B-201ENST00000445593 VPS26AO75436 327 aa16.7■□□□□ 0.26
LAPTM4B-201ENST00000445593 PRAMEF1O95521 474 aa16.7■□□□□ 0.26
LAPTM4B-201ENST00000445593 CCR2P41597 374 aa16.7■□□□□ 0.26
LAPTM4B-201ENST00000445593 CREB5Q02930 508 aa16.7■□□□□ 0.26
LAPTM4B-201ENST00000445593 RBBP7Q16576 425 aa16.7■□□□□ 0.26
LAPTM4B-201ENST00000445593 TYSND1Q2T9J0 566 aa16.7■□□□□ 0.26
LAPTM4B-201ENST00000445593 CYHR1Q6ZMK1 362 aa16.7■□□□□ 0.26
LAPTM4B-201ENST00000445593 FIBCD1Q8N539 461 aa16.7■□□□□ 0.26
LAPTM4B-201ENST00000445593 RP9Q8TA86 221 aaKnown RBP16.7■□□□□ 0.26
LAPTM4B-201ENST00000445593 HMGCLL1Q8TB92 370 aa16.7■□□□□ 0.26
LAPTM4B-201ENST00000445593 ATOH8Q96SQ7 321 aa16.7■□□□□ 0.26
LAPTM4B-201ENST00000445593 APOL5Q9BWW9 433 aa16.7■□□□□ 0.26
LAPTM4B-201ENST00000445593 ABHD14A-ACY1A0A1B0GW23 586 aa16.69■□□□□ 0.26
LAPTM4B-201ENST00000445593 CEACAM7Q14002 265 aa16.69■□□□□ 0.26
LAPTM4B-201ENST00000445593 GRB7Q14451 532 aa16.69■□□□□ 0.26
LAPTM4B-201ENST00000445593 RFTN1Q14699 578 aaPredicted RBP16.69■□□□□ 0.26
LAPTM4B-201ENST00000445593 NAT16Q8N8M0 369 aa16.69■□□□□ 0.26
LAPTM4B-201ENST00000445593 GPR150Q8NGU9 434 aa16.69■□□□□ 0.26
LAPTM4B-201ENST00000445593 TOX2Q96NM4 488 aa16.69■□□□□ 0.26
LAPTM4B-201ENST00000445593 YIPF2Q9BWQ6 316 aa16.69■□□□□ 0.26
LAPTM4B-201ENST00000445593 S100A14Q9HCY8 104 aa16.69■□□□□ 0.26
LAPTM4B-201ENST00000445593 CXXC1Q9P0U4 656 aaPredicted RBP16.69■□□□□ 0.26
LAPTM4B-201ENST00000445593 EIF2B4Q9UI10 523 aaKnown RBP16.69■□□□□ 0.26
LAPTM4B-201ENST00000445593 CHD5Q8TDI0 1954 aa16.69■□□□□ 0.26
LAPTM4B-201ENST00000445593 ANKRD33BA6NCL7 494 aa16.69■□□□□ 0.26
LAPTM4B-201ENST00000445593 PSMD12O00232 456 aaPredicted RBP16.69■□□□□ 0.26
LAPTM4B-201ENST00000445593 WISP3O95389 354 aaPredicted RBP16.69■□□□□ 0.26
LAPTM4B-201ENST00000445593 BCL2L1Q07817 233 aa16.69■□□□□ 0.26
LAPTM4B-201ENST00000445593 RFLNAQ6ZTI6 216 aa16.69■□□□□ 0.26
LAPTM4B-201ENST00000445593 ITIH5Q86UX2 942 aa16.69■□□□□ 0.26
LAPTM4B-201ENST00000445593 LMNTD2Q8IXW0 634 aa16.69■□□□□ 0.26
LAPTM4B-201ENST00000445593 TTC30BQ8N4P2 665 aa16.69■□□□□ 0.26
LAPTM4B-201ENST00000445593 TWIST2Q8WVJ9 160 aa16.69■□□□□ 0.26
LAPTM4B-201ENST00000445593 TCF25Q9BQ70 676 aa16.69■□□□□ 0.26
LAPTM4B-201ENST00000445593 C2orf49Q9BVC5 232 aaPredicted RBP16.69■□□□□ 0.26
LAPTM4B-201ENST00000445593 SLC46A2Q9BY10 475 aa16.69■□□□□ 0.26
LAPTM4B-201ENST00000445593 ASB8Q9H765 288 aa16.69■□□□□ 0.26
LAPTM4B-201ENST00000445593 AKTIPQ9H8T0 292 aa16.69■□□□□ 0.26
LAPTM4B-201ENST00000445593 ARIH1Q9Y4X5 557 aaPredicted RBP16.69■□□□□ 0.26
LAPTM4B-201ENST00000445593 TPP2P29144 1249 aaPredicted RBP16.69■□□□□ 0.26
LAPTM4B-201ENST00000445593 MTA1Q13330 715 aa16.69■□□□□ 0.26
LAPTM4B-201ENST00000445593 FLOT2Q14254 428 aa16.69■□□□□ 0.26
LAPTM4B-201ENST00000445593 TRIP10Q15642 601 aa16.69■□□□□ 0.26
LAPTM4B-201ENST00000445593 PTRHD1Q6GMV3 140 aaKnown RBP16.69■□□□□ 0.26
LAPTM4B-201ENST00000445593 STAG3L4Q8TBR4 150 aa16.69■□□□□ 0.26
LAPTM4B-201ENST00000445593 GRIN3AQ8TCU5 1115 aa16.69■□□□□ 0.26
LAPTM4B-201ENST00000445593 C17orf80Q9BSJ5 609 aa16.69■□□□□ 0.26
LAPTM4B-201ENST00000445593 PCDHAC1Q9H158 963 aa16.69■□□□□ 0.26
LAPTM4B-201ENST00000445593 SYTL2Q9HCH5 934 aa16.69■□□□□ 0.26
LAPTM4B-201ENST00000445593 ADAMTS6Q9UKP5 1117 aa16.69■□□□□ 0.26
LAPTM4B-201ENST00000445593 INTS6Q9UL03 887 aaKnown RBP16.69■□□□□ 0.26
LAPTM4B-201ENST00000445593 NEDD8-MDP1E9PL57 170 aa16.68■□□□□ 0.26
LAPTM4B-201ENST00000445593 NR5A2O00482 541 aa16.68■□□□□ 0.26
LAPTM4B-201ENST00000445593 CCNT2O60583 730 aaKnown RBP16.68■□□□□ 0.26
LAPTM4B-201ENST00000445593 KATNA1O75449 491 aa16.68■□□□□ 0.26
LAPTM4B-201ENST00000445593 PEX2P28328 305 aa16.68■□□□□ 0.26
LAPTM4B-201ENST00000445593 MAGEA10P43363 369 aaPredicted RBP16.68■□□□□ 0.26
LAPTM4B-201ENST00000445593 ERVFC1P60507 584 aa16.68■□□□□ 0.26
LAPTM4B-201ENST00000445593 NTHL1P78549 312 aa16.68■□□□□ 0.26
LAPTM4B-201ENST00000445593 MS4A2Q01362 244 aa16.68■□□□□ 0.26
LAPTM4B-201ENST00000445593 CBX2Q14781 532 aaPredicted RBP16.68■□□□□ 0.26
LAPTM4B-201ENST00000445593 PGM2L1Q6PCE3 622 aa16.68■□□□□ 0.26
LAPTM4B-201ENST00000445593 ZSWIM9Q86XI8 627 aa16.68■□□□□ 0.26
LAPTM4B-201ENST00000445593 KREMEN2Q8NCW0 462 aa16.68■□□□□ 0.26
LAPTM4B-201ENST00000445593 RIN3Q8TB24 985 aa16.68■□□□□ 0.26
LAPTM4B-201ENST00000445593 FUBP1Q96AE4 644 aaKnown RBP16.68■□□□□ 0.26
LAPTM4B-201ENST00000445593 CCDC28BQ9BUN5 200 aa16.68■□□□□ 0.26
LAPTM4B-201ENST00000445593 C1orf50Q9BV19 199 aa16.68■□□□□ 0.26
LAPTM4B-201ENST00000445593 SEZ6LQ9BYH1 1024 aa16.68■□□□□ 0.26
LAPTM4B-201ENST00000445593 LRRC42Q9Y546 428 aa16.68■□□□□ 0.26
LAPTM4B-201ENST00000445593 OR51B4Q9Y5P0 310 aa16.68■□□□□ 0.26
LAPTM4B-201ENST00000445593 LCHNA4D1U4 455 aa16.68■□□□□ 0.26
LAPTM4B-201ENST00000445593 SNX2O60749 519 aa16.68■□□□□ 0.26
LAPTM4B-201ENST00000445593 ALDOCP09972 364 aaKnown RBP16.68■□□□□ 0.26
LAPTM4B-201ENST00000445593 CASP2P42575 452 aa16.68■□□□□ 0.26
LAPTM4B-201ENST00000445593 MTTPP55157 894 aa16.68■□□□□ 0.26
LAPTM4B-201ENST00000445593 CLCQ05315 142 aa16.68■□□□□ 0.26
LAPTM4B-201ENST00000445593 PABPC1LQ4VXU2 614 aaKnown RBP16.68■□□□□ 0.26
LAPTM4B-201ENST00000445593 DGKKQ5KSL6 1271 aa16.68■□□□□ 0.26
LAPTM4B-201ENST00000445593 RETSATQ6NUM9 610 aa16.68■□□□□ 0.26
LAPTM4B-201ENST00000445593 LKAAEAR1Q8TD35 194 aa16.68■□□□□ 0.26
LAPTM4B-201ENST00000445593 EZH1Q92800 747 aaPredicted RBP16.68■□□□□ 0.26
LAPTM4B-201ENST00000445593 CIPCQ9C0C6 399 aa16.68■□□□□ 0.26
LAPTM4B-201ENST00000445593 EFCAB1Q9HAE3 211 aa16.68■□□□□ 0.26
LAPTM4B-201ENST00000445593 ZFYVE1Q9HBF4 777 aa16.68■□□□□ 0.26
LAPTM4B-201ENST00000445593 INTS10Q9NVR2 710 aaKnown RBP16.68■□□□□ 0.26
LAPTM4B-201ENST00000445593 CHCHD3Q9NX63 227 aaKnown RBP16.68■□□□□ 0.26
LAPTM4B-201ENST00000445593 CD84Q9UIB8 345 aa16.68■□□□□ 0.26
LAPTM4B-201ENST00000445593 LEFTY2O00292 366 aa16.67■□□□□ 0.26
LAPTM4B-201ENST00000445593 AZIN1O14977 448 aa16.67■□□□□ 0.26
LAPTM4B-201ENST00000445593 PARNO95453 639 aaKnown RBP16.67■□□□□ 0.26
LAPTM4B-201ENST00000445593 UBTFL6P0CB48 400 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms