RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 NRROSQ86YC3 692 aa13.91□□□□□ -0.18
TREX1-202ENST00000444177 CCNJLQ8IV13 435 aa13.91□□□□□ -0.18
TREX1-202ENST00000444177 RAVER1Q8IY67 606 aaKnown RBP13.91□□□□□ -0.18
TREX1-202ENST00000444177 FBXO39Q8N4B4 442 aa13.91□□□□□ -0.18
TREX1-202ENST00000444177 SLC25A41Q8N5S1 370 aa13.91□□□□□ -0.18
TREX1-202ENST00000444177 PTCD2Q8WV60 388 aaKnown RBP13.91□□□□□ -0.18
TREX1-202ENST00000444177 SLC39A7Q92504 469 aa13.91□□□□□ -0.18
TREX1-202ENST00000444177 CCDC97Q96F63 343 aaPredicted RBP13.91□□□□□ -0.18
TREX1-202ENST00000444177 OXNAD1Q96HP4 312 aaPredicted RBP13.91□□□□□ -0.18
TREX1-202ENST00000444177 HES6Q96HZ4 224 aa13.91□□□□□ -0.18
TREX1-202ENST00000444177 FSD1LQ9BXM9 530 aa13.91□□□□□ -0.18
TREX1-202ENST00000444177 GPR63Q9BZJ6 419 aa13.91□□□□□ -0.18
TREX1-202ENST00000444177 FOXP3Q9BZS1 431 aa13.91□□□□□ -0.18
TREX1-202ENST00000444177 STRADBQ9C0K7 418 aa13.91□□□□□ -0.18
TREX1-202ENST00000444177 FAM83DQ9H4H8 585 aa13.91□□□□□ -0.18
TREX1-202ENST00000444177 CPNE5Q9HCH3 593 aa13.91□□□□□ -0.18
TREX1-202ENST00000444177 EPB41L5Q9HCM4 733 aa13.91□□□□□ -0.18
TREX1-202ENST00000444177 TRNAU1APQ9NX07 287 aaKnown RBP13.91□□□□□ -0.18
TREX1-202ENST00000444177 SUFUQ9UMX1 484 aa13.91□□□□□ -0.18
TREX1-202ENST00000444177 SSUH2Q9Y2M2 353 aa13.91□□□□□ -0.18
TREX1-202ENST00000444177 RNF215Q9Y6U7 377 aa13.91□□□□□ -0.18
TREX1-202ENST00000444177 PIEZO2Q9H5I5 2752 aa13.91□□□□□ -0.18
TREX1-202ENST00000444177 PLD2O14939 933 aa13.9□□□□□ -0.18
TREX1-202ENST00000444177 NUDT21O43809 227 aaKnown RBP13.9□□□□□ -0.18
TREX1-202ENST00000444177 ASMTLO95671 621 aa13.9□□□□□ -0.18
TREX1-202ENST00000444177 PRB1P04280 392 aa13.9□□□□□ -0.18
TREX1-202ENST00000444177 FGF1P05230 155 aa13.9□□□□□ -0.18
TREX1-202ENST00000444177 ITGA2BP08514 1039 aa13.9□□□□□ -0.18
TREX1-202ENST00000444177 CHRNA4P43681 627 aa13.9□□□□□ -0.18
TREX1-202ENST00000444177 ILF3Q12906 894 aaKnown RBP eCLIP13.9□□□□□ -0.18
TREX1-202ENST00000444177 EIF3IQ13347 325 aaKnown RBP13.9□□□□□ -0.18
TREX1-202ENST00000444177 MPP3Q13368 585 aa13.9□□□□□ -0.18
TREX1-202ENST00000444177 HENMT1Q5T8I9 393 aaKnown RBP13.9□□□□□ -0.18
TREX1-202ENST00000444177 SEL1L2Q5TEA6 688 aa13.9□□□□□ -0.18
TREX1-202ENST00000444177 ARHGAP40Q5TG30 622 aa13.9□□□□□ -0.18
TREX1-202ENST00000444177 NLRP8Q86W28 1048 aa13.9□□□□□ -0.18
TREX1-202ENST00000444177 C17orf82Q86X59 251 aaPredicted RBP13.9□□□□□ -0.18
TREX1-202ENST00000444177 TTC13Q8NBP0 860 aa13.9□□□□□ -0.18
TREX1-202ENST00000444177 LSM14AQ8ND56 463 aaKnown RBP13.9□□□□□ -0.18
TREX1-202ENST00000444177 MRGPRX2Q96LB1 330 aa13.9□□□□□ -0.18
TREX1-202ENST00000444177 TMEM74Q96NL1 305 aa13.9□□□□□ -0.18
TREX1-202ENST00000444177 ALS2CR12Q96Q35 445 aa13.9□□□□□ -0.18
TREX1-202ENST00000444177 WDR24Q96S15 920 aa13.9□□□□□ -0.18
TREX1-202ENST00000444177 GSDMCQ9BYG8 508 aa13.9□□□□□ -0.18
TREX1-202ENST00000444177 MAGEE1Q9HCI5 957 aa13.9□□□□□ -0.18
TREX1-202ENST00000444177 LZTFL1Q9NQ48 299 aa13.9□□□□□ -0.18
TREX1-202ENST00000444177 ATXN7L1Q9ULK2 861 aaPredicted RBP13.9□□□□□ -0.18
TREX1-202ENST00000444177 SLC17A4Q9Y2C5 497 aa13.9□□□□□ -0.18
TREX1-202ENST00000444177 TMEM98Q9Y2Y6 226 aa13.9□□□□□ -0.18
TREX1-202ENST00000444177 SPO11Q9Y5K1 396 aa13.9□□□□□ -0.18
TREX1-202ENST00000444177 ZNF462Q96JM2 2506 aa13.9□□□□□ -0.18
TREX1-202ENST00000444177 RGSL1A5PLK6 1076 aa13.89□□□□□ -0.19
TREX1-202ENST00000444177 FADS2P1A8MWK0 482 aa13.89□□□□□ -0.19
TREX1-202ENST00000444177 B4GAT1O43505 415 aa13.89□□□□□ -0.19
TREX1-202ENST00000444177 ANXA9O76027 345 aa13.89□□□□□ -0.19
TREX1-202ENST00000444177 IVLP07476 585 aa13.89□□□□□ -0.19
TREX1-202ENST00000444177 HLA-DPA1P20036 260 aa13.89□□□□□ -0.19
TREX1-202ENST00000444177 PSMB4P28070 264 aa13.89□□□□□ -0.19
TREX1-202ENST00000444177 CCKBRP32239 447 aa13.89□□□□□ -0.19
TREX1-202ENST00000444177 UGT1A5P35504 534 aa13.89□□□□□ -0.19
TREX1-202ENST00000444177 GEMP55040 296 aa13.89□□□□□ -0.19
TREX1-202ENST00000444177 B4GALNT1Q00973 533 aa13.89□□□□□ -0.19
TREX1-202ENST00000444177 ZFP36L1Q07352 338 aaKnown RBP13.89□□□□□ -0.19
TREX1-202ENST00000444177 PRPSAP1Q14558 356 aa13.89□□□□□ -0.19
TREX1-202ENST00000444177 SIRPB2Q5JXA9 342 aa13.89□□□□□ -0.19
TREX1-202ENST00000444177 ZNF569Q5MCW4 686 aa13.89□□□□□ -0.19
TREX1-202ENST00000444177 ANKRD20A2Q5SQ80 823 aa13.89□□□□□ -0.19
TREX1-202ENST00000444177 ANKRD20A1Q5TYW2 823 aa13.89□□□□□ -0.19
TREX1-202ENST00000444177 ANKRD20A3Q5VUR7 823 aa13.89□□□□□ -0.19
TREX1-202ENST00000444177 SPRED1Q7Z699 444 aa13.89□□□□□ -0.19
TREX1-202ENST00000444177 CCDC110Q8TBZ0 833 aa13.89□□□□□ -0.19
TREX1-202ENST00000444177 ZDHHC1Q8WTX9 485 aa13.89□□□□□ -0.19
TREX1-202ENST00000444177 EID2BQ96D98 161 aa13.89□□□□□ -0.19
TREX1-202ENST00000444177 OR2M4Q96R27 311 aa13.89□□□□□ -0.19
TREX1-202ENST00000444177 SRPK1Q96SB4 655 aaKnown RBP13.89□□□□□ -0.19
TREX1-202ENST00000444177 SPATA16Q9BXB7 569 aa13.89□□□□□ -0.19
TREX1-202ENST00000444177 CDH19Q9H159 772 aa13.89□□□□□ -0.19
TREX1-202ENST00000444177 TAAR2Q9P1P5 351 aa13.89□□□□□ -0.19
TREX1-202ENST00000444177 LOC285095A0A1B0GVY8 99 aa13.88□□□□□ -0.19
TREX1-202ENST00000444177 AURKAO14965 403 aa13.88□□□□□ -0.19
TREX1-202ENST00000444177 ZNF189O75820 626 aaPredicted RBP13.88□□□□□ -0.19
TREX1-202ENST00000444177 ATP1A1P05023 1023 aaKnown RBP13.88□□□□□ -0.19
TREX1-202ENST00000444177 HGFP14210 728 aa13.88□□□□□ -0.19
TREX1-202ENST00000444177 AK4P27144 223 aaPredicted RBP13.88□□□□□ -0.19
TREX1-202ENST00000444177 SLC5A2P31639 672 aa13.88□□□□□ -0.19
TREX1-202ENST00000444177 ADCY8P40145 1251 aa13.88□□□□□ -0.19
TREX1-202ENST00000444177 MAZP56270 477 aaKnown RBP13.88□□□□□ -0.19
TREX1-202ENST00000444177 DCDC1P59894 354 aa13.88□□□□□ -0.19
TREX1-202ENST00000444177 CTBSQ01459 385 aa13.88□□□□□ -0.19
TREX1-202ENST00000444177 VAC14Q08AM6 782 aa13.88□□□□□ -0.19
TREX1-202ENST00000444177 KLF1Q13351 362 aaPredicted RBP13.88□□□□□ -0.19
TREX1-202ENST00000444177 SLC1A5Q15758 541 aa13.88□□□□□ -0.19
TREX1-202ENST00000444177 SLC30A9Q6PML9 568 aa13.88□□□□□ -0.19
TREX1-202ENST00000444177 PCSK4Q6UW60 755 aa13.88□□□□□ -0.19
TREX1-202ENST00000444177 GLT6D1Q7Z4J2 308 aa13.88□□□□□ -0.19
TREX1-202ENST00000444177 TMC3Q7Z5M5 1100 aa13.88□□□□□ -0.19
TREX1-202ENST00000444177 GALNT13Q8IUC8 556 aa13.88□□□□□ -0.19
TREX1-202ENST00000444177 GPR26Q8NDV2 337 aa13.88□□□□□ -0.19
TREX1-202ENST00000444177 TRIM58Q8NG06 486 aa13.88□□□□□ -0.19
TREX1-202ENST00000444177 BLOC1S5Q8TDH9 187 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms