RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 ZNF542PQ5EBM4 170 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 KCTD11Q693B1 232 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 ARMC6Q6NXE6 501 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 ULK2Q8IYT8 1036 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 OR2T34Q8NGX1 318 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 OR6P1Q8NGX9 317 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 LRRN4Q8WUT4 740 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 MTBPQ96DY7 904 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 KCTD15Q96SI1 283 aaPredicted RBP7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 EIF2B3Q9NR50 452 aaKnown RBP7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 SLC17A6Q9P2U8 582 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 PPM1HQ9ULR3 514 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 NEU3Q9UQ49 428 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 PSAT1Q9Y617 370 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 DOCK6Q96HP0 2047 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 CEP250Q9BV73 2442 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 PLXNA3P51805 1871 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 K7ERQ8 282 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 NVLO15381 856 aaKnown RBP7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 KCNN4O15554 427 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 RNGTTO60942 597 aaKnown RBP7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 PROCP04070 461 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 SNRPAP09012 282 aaKnown RBP7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 RALBP11234 206 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 RPIAP49247 311 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 AFF3P51826 1226 aaKnown RBP7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 NAA25Q14CX7 972 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 FSCBQ5H9T9 825 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 FYB2Q5VWT5 728 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 ENPP7Q6UWV6 458 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 CLPTM1LQ96KA5 538 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 SLC2A13Q96QE2 648 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 DTLQ9NZJ0 730 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 PCDHGC4Q9Y5F7 938 aa7.36□□□□□ -1.23
CDC42BPA-208ENST00000442054 A0A0G2JND7 137 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 AHCYL1O43865 530 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 MT-ND3P03897 115 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 MLNP12872 115 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 VCLP18206 1134 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 GABRG2P18507 467 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 GKP32189 559 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 TMEM92Q6UXU6 159 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 BEND5Q7L4P6 421 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 LMX1AQ8TE12 382 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 TFB1MQ8WVM0 346 aaKnown RBP7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 FAM167BQ9BTA0 163 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 PRSS16Q9NQE7 514 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 ANLNQ9NQW6 1124 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.35□□□□□ -1.232e-6■■■■■ 39.6
CDC42BPA-208ENST00000442054 ACACAQ13085 2346 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 CCDC78A2IDD5 438 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 TARM1B6A8C7 271 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 G3V2L1 256 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 MMP20O60882 483 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 THEGLP0DJG4 465 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 TROVE2P10155 538 aaKnown RBP eCLIP7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 ANPEPP15144 967 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 CD38P28907 300 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 ACSL1P33121 698 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 ILF3Q12906 894 aaKnown RBP eCLIP7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 PUM1Q14671 1186 aaKnown RBP eCLIP7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 MYLK3Q32MK0 819 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 ESRP1Q6NXG1 681 aaKnown RBP7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 TTC23LQ6PF05 361 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 RIPOR1Q6ZS17 1223 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 CAMK1DQ8IU85 385 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 NTAN1Q96AB6 310 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 TTC17Q96AE7 1141 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 MRRFQ96E11 262 aaKnown RBP7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 MKRN2Q9H000 416 aaKnown RBP7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 SUV39H2Q9H5I1 410 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 FZD3Q9NPG1 666 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 ZNHIT2Q9UHR6 403 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 CRLS1Q9UJA2 301 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 CLEC4EQ9ULY5 219 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 MAD1L1Q9Y6D9 718 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 TRBV23OR9-2A0A075B6M9 112 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 FAM92AA1XBS5 289 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 PLIN3O60664 434 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 OLFM2O95897 454 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 MT-CO1P00395 513 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 ARL1P40616 181 aaPredicted RBP7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 CCT8P50990 548 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 PRAMEP78395 509 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 CNTN1Q12860 1018 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 EIF4EBP2Q13542 120 aaPredicted RBP7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 BMPR2Q13873 1038 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 DPYSQ14117 519 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 PLCL1Q15111 1095 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 TCEAL6Q6IPX3 200 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 NAPRTQ6XQN6 538 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 BHLHA9Q7RTU4 235 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 PDSS2Q86YH6 399 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 PALM2Q8IXS6 379 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 FAM46DQ8NEK8 389 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 CCDC110Q8TBZ0 833 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 ACMSDQ8TDX5 336 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 TCEAL3Q969E4 200 aa7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 FCRL3Q96P31 734 aaPredicted RBP7.35□□□□□ -1.23
CDC42BPA-208ENST00000442054 CSPG4P5Q96PW8 444 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms