RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 MXRA5Q9NR99 2828 aa4.84□□□□□ -1.63
PTPN4-206ENST00000441089 hCG_1818297A0A087WSY0 165 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 A0A1B0GVM2 712 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 FAM72CH0Y354 149 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 TLR4O00206 839 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 CES2O00748 559 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 SCAMP3O14828 347 aaKnown RBP4.83□□□□□ -1.64
PTPN4-206ENST00000441089 TRIM24O15164 1050 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 COCHO43405 550 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 CEP104O60308 925 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 NOBOXO60393 691 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 CLEC3AO75596 197 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 TCEA3O75764 348 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 RNF8O76064 485 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 OAS1P00973 400 aaKnown RBP4.83□□□□□ -1.64
PTPN4-206ENST00000441089 IGLV3-27P01718 113 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 PRKCGP05129 697 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 KRT7P08729 469 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 MBL2P11226 248 aaPredicted RBP4.83□□□□□ -1.64
PTPN4-206ENST00000441089 RALAP11233 206 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 TYRP14679 529 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 NME1P15531 152 aaKnown RBP4.83□□□□□ -1.64
PTPN4-206ENST00000441089 KDELR1P24390 212 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 IL4RP24394 825 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 CDKN2BP42772 138 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 CXCR3P49682 368 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 COPAP53621 1224 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 RWDD2BP57060 319 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 NXPH1P58417 271 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 CLCQ05315 142 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 C2orf54Q08AI8 447 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 EIF3IQ13347 325 aaKnown RBP4.83□□□□□ -1.64
PTPN4-206ENST00000441089 KLF1Q13351 362 aaPredicted RBP4.83□□□□□ -1.64
PTPN4-206ENST00000441089 DPYSL3Q14195 570 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 TAZQ16635 292 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 WHAMMP3Q1A5X7 153 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 TTC31Q49AM3 519 aaPredicted RBP4.83□□□□□ -1.64
PTPN4-206ENST00000441089 FAM72AQ5TYM5 149 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 KIAA0895LQ68EN5 471 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 FAM72DQ6L9T8 149 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 SCYL2Q6P3W7 929 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 RBM44Q6ZP01 1051 aaKnown RBP4.83□□□□□ -1.64
PTPN4-206ENST00000441089 POLNQ7Z5Q5 900 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 FAM72BQ86X60 149 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 CACUL1Q86Y37 369 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 TMEM25Q86YD3 366 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 SLC13A5Q86YT5 568 aaPredicted RBP4.83□□□□□ -1.64
PTPN4-206ENST00000441089 ARHGAP18Q8N392 663 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 PQLC3Q8N755 202 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 UBL4BQ8N7F7 174 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 OR2T3Q8NH03 318 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 EXD1Q8NHP7 514 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 WDR48Q8TAF3 677 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 FAM71BQ8TC56 605 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 MAPK15Q8TD08 544 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 ACTRT1Q8TDG2 376 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 TEKT4Q8WW24 435 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 OVCA2Q8WZ82 227 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 HSPH1Q92598 858 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 FAF2Q96CS3 445 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 TCTN2Q96GX1 697 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 SLC39A13Q96H72 371 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 PRR11Q96HE9 360 aaPredicted RBP4.83□□□□□ -1.64
PTPN4-206ENST00000441089 PBKQ96KB5 322 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 SLC6A18Q96N87 628 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 CATSPER2Q96P56 530 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 PLCD4Q9BRC7 762 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 SPON2Q9BUD6 331 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 BBS2Q9BXC9 721 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 RNF38Q9H0F5 515 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 FAM204AQ9H8W3 233 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 PCDH18Q9HCL0 1135 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 TLR8Q9NR97 1041 aaKnown RBP4.83□□□□□ -1.64
PTPN4-206ENST00000441089 ABCC13Q9NSE7 274 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.83□□□□□ -1.64
PTPN4-206ENST00000441089 DDIT4Q9NX09 232 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 ARHGEF38Q9NXL2 777 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 CLIC5Q9NZA1 410 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 THAP10Q9P2Z0 257 aaPredicted RBP4.83□□□□□ -1.64
PTPN4-206ENST00000441089 RASAL2Q9UJF2 1139 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 TTC7AQ9ULT0 858 aaPredicted RBP4.83□□□□□ -1.64
PTPN4-206ENST00000441089 NEU3Q9UQ49 428 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 R3HDM2Q9Y2K5 976 aaKnown RBP4.83□□□□□ -1.64
PTPN4-206ENST00000441089 ENTPD2Q9Y5L3 495 aa4.83□□□□□ -1.64
PTPN4-206ENST00000441089 FBN1P35555 2871 aaKnown RBP4.83□□□□□ -1.64
PTPN4-206ENST00000441089 A0A1W2PNU3 283 aaPredicted RBP4.82□□□□□ -1.64
PTPN4-206ENST00000441089 SLC12A8A0AV02 714 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 LRRD1A4D1F6 860 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 LRRC72A6NJI9 287 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 KCNU1A8MYU2 1149 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 NEDD8-MDP1E9PL57 170 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 PGRMC1O00264 195 aaKnown RBP4.82□□□□□ -1.64
PTPN4-206ENST00000441089 TRIM38O00635 465 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 PLD2O14939 933 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 NVLO15381 856 aaKnown RBP4.82□□□□□ -1.64
PTPN4-206ENST00000441089 PRPSAP2O60256 369 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 TLR5O60602 858 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 DIAPH2O60879 1101 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 FAM155BO75949 473 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 ZRANB2O95218 330 aaKnown RBP eCLIP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms