RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 PDLIM5Q96HC4 596 aaKnown RBP11.69□□□□□ -0.54
SMAD3-202ENST00000439724 ZSWIM3Q96MP5 696 aa11.69□□□□□ -0.54
SMAD3-202ENST00000439724 C1QTNF3Q9BXJ4 246 aa11.69□□□□□ -0.54
SMAD3-202ENST00000439724 LINC00597Q9H2U6 94 aa11.69□□□□□ -0.54
SMAD3-202ENST00000439724 RNPEPL1Q9HAU8 725 aa11.69□□□□□ -0.54
SMAD3-202ENST00000439724 CD248Q9HCU0 757 aa11.69□□□□□ -0.54
SMAD3-202ENST00000439724 TNFRSF12AQ9NP84 129 aa11.69□□□□□ -0.54
SMAD3-202ENST00000439724 IL26Q9NPH9 171 aa11.69□□□□□ -0.54
SMAD3-202ENST00000439724 MRGBPQ9NV56 204 aa11.69□□□□□ -0.54
SMAD3-202ENST00000439724 GALPQ9UBC7 116 aa11.69□□□□□ -0.54
SMAD3-202ENST00000439724 GLYATL1P3A0A0U1RQE8 302 aa11.68□□□□□ -0.54
SMAD3-202ENST00000439724 NPEPPSL1A6NEC2 478 aa11.68□□□□□ -0.54
SMAD3-202ENST00000439724 AGAP14A8MT82 685 aa11.68□□□□□ -0.54
SMAD3-202ENST00000439724 MEI4A8MW99 385 aa11.68□□□□□ -0.54
SMAD3-202ENST00000439724 SUPT3HB4E1H0 165 aa11.68□□□□□ -0.54
SMAD3-202ENST00000439724 E5RI56 91 aa11.68□□□□□ -0.54
SMAD3-202ENST00000439724 CDC7O00311 574 aa11.68□□□□□ -0.54
SMAD3-202ENST00000439724 UBFD1O14562 309 aaKnown RBP11.68□□□□□ -0.54
SMAD3-202ENST00000439724 GPR39O43194 453 aa11.68□□□□□ -0.54
SMAD3-202ENST00000439724 SUPT3HO75486 399 aa11.68□□□□□ -0.54
SMAD3-202ENST00000439724 ECI2O75521 394 aa11.68□□□□□ -0.54
SMAD3-202ENST00000439724 PAPLNO95428 1278 aa11.68□□□□□ -0.54
SMAD3-202ENST00000439724 FGF4P08620 206 aa11.68□□□□□ -0.54
SMAD3-202ENST00000439724 GFAPP14136 432 aa11.68□□□□□ -0.54
SMAD3-202ENST00000439724 MYOGP15173 224 aa11.68□□□□□ -0.54
SMAD3-202ENST00000439724 GM2AP17900 193 aa11.68□□□□□ -0.54
SMAD3-202ENST00000439724 ACRV1P26436 265 aa11.68□□□□□ -0.54
SMAD3-202ENST00000439724 PIK3R1P27986 724 aa11.68□□□□□ -0.54
SMAD3-202ENST00000439724 WEE1P30291 646 aa11.68□□□□□ -0.54
SMAD3-202ENST00000439724 VASPP50552 380 aaPredicted RBP11.68□□□□□ -0.54
SMAD3-202ENST00000439724 CLCN7P51798 805 aa11.68□□□□□ -0.54
SMAD3-202ENST00000439724 MXRA7P84157 204 aa11.68□□□□□ -0.54
SMAD3-202ENST00000439724 TSNQ15631 228 aaKnown RBP11.68□□□□□ -0.54
SMAD3-202ENST00000439724 PFKFB4Q16877 469 aa11.68□□□□□ -0.54
SMAD3-202ENST00000439724 CRTC1Q6UUV9 634 aa11.68□□□□□ -0.54
SMAD3-202ENST00000439724 DPY19L3Q6ZPD9 716 aa11.68□□□□□ -0.54
SMAD3-202ENST00000439724 RPS27LQ71UM5 84 aaKnown RBP11.68□□□□□ -0.54
SMAD3-202ENST00000439724 SCUBE1Q8IWY4 988 aa11.68□□□□□ -0.54
SMAD3-202ENST00000439724 ADGRG2Q8IZP9 1017 aa11.68□□□□□ -0.54
SMAD3-202ENST00000439724 AHI1Q8N157 1196 aa11.68□□□□□ -0.54
SMAD3-202ENST00000439724 PELI3Q8N2H9 469 aa11.68□□□□□ -0.54
SMAD3-202ENST00000439724 FBXO39Q8N4B4 442 aa11.68□□□□□ -0.54
SMAD3-202ENST00000439724 CELF5Q8N6W0 485 aaKnown RBP11.68□□□□□ -0.54
SMAD3-202ENST00000439724 ENDOVQ8N8Q3 282 aaKnown RBP11.68□□□□□ -0.54
SMAD3-202ENST00000439724 CFAP61Q8NHU2 1237 aa11.68□□□□□ -0.54
SMAD3-202ENST00000439724 FUBP1Q96AE4 644 aaKnown RBP11.68□□□□□ -0.54
SMAD3-202ENST00000439724 LINGO1Q96FE5 620 aa11.68□□□□□ -0.54
SMAD3-202ENST00000439724 PPP1R36Q96LQ0 422 aa11.68□□□□□ -0.54
SMAD3-202ENST00000439724 RTKNQ9BST9 563 aa11.68□□□□□ -0.54
SMAD3-202ENST00000439724 CLPBQ9H078 707 aa11.68□□□□□ -0.54
SMAD3-202ENST00000439724 ASB8Q9H765 288 aa11.68□□□□□ -0.54
SMAD3-202ENST00000439724 GNPTGQ9UJJ9 305 aa11.68□□□□□ -0.54
SMAD3-202ENST00000439724 DHRS7Q9Y394 339 aa11.68□□□□□ -0.54
SMAD3-202ENST00000439724 MRPS23Q9Y3D9 190 aaKnown RBP11.68□□□□□ -0.54
SMAD3-202ENST00000439724 TRAF6Q9Y4K3 522 aa11.68□□□□□ -0.54
SMAD3-202ENST00000439724 HCFC2Q9Y5Z7 792 aa11.68□□□□□ -0.54
SMAD3-202ENST00000439724 WNT6Q9Y6F9 365 aa11.68□□□□□ -0.54
SMAD3-202ENST00000439724 ATG2AQ2TAZ0 1938 aa11.68□□□□□ -0.54
SMAD3-202ENST00000439724 PLXNB3Q9ULL4 1909 aa11.67□□□□□ -0.54
SMAD3-202ENST00000439724 BTN3A1O00481 513 aa11.67□□□□□ -0.54
SMAD3-202ENST00000439724 SKAP2O75563 359 aaPredicted RBP11.67□□□□□ -0.54
SMAD3-202ENST00000439724 LMNAP02545 664 aaKnown RBP11.67□□□□□ -0.54
SMAD3-202ENST00000439724 RPS17P08708 135 aaKnown RBP11.67□□□□□ -0.54
SMAD3-202ENST00000439724 THRAP10827 490 aa11.67□□□□□ -0.54
SMAD3-202ENST00000439724 EZRP15311 586 aaKnown RBP11.67□□□□□ -0.54
SMAD3-202ENST00000439724 CHRM3P20309 590 aa11.67□□□□□ -0.54
SMAD3-202ENST00000439724 GPM6BQ13491 265 aa11.67□□□□□ -0.54
SMAD3-202ENST00000439724 ACCSLQ4AC99 568 aa11.67□□□□□ -0.54
SMAD3-202ENST00000439724 ZNF697Q5TEC3 545 aa11.67□□□□□ -0.54
SMAD3-202ENST00000439724 ZDHHC20Q5W0Z9 365 aa11.67□□□□□ -0.54
SMAD3-202ENST00000439724 NXNQ6DKJ4 435 aa11.67□□□□□ -0.54
SMAD3-202ENST00000439724 TXNDC11Q6PKC3 985 aa11.67□□□□□ -0.54
SMAD3-202ENST00000439724 CHSY3Q70JA7 882 aa11.67□□□□□ -0.54
SMAD3-202ENST00000439724 TSPAN33Q86UF1 283 aa11.67□□□□□ -0.54
SMAD3-202ENST00000439724 CPNE9Q8IYJ1 553 aa11.67□□□□□ -0.54
SMAD3-202ENST00000439724 ULK2Q8IYT8 1036 aa11.67□□□□□ -0.54
SMAD3-202ENST00000439724 CLYBLQ8N0X4 340 aa11.67□□□□□ -0.54
SMAD3-202ENST00000439724 RP9Q8TA86 221 aaKnown RBP11.67□□□□□ -0.54
SMAD3-202ENST00000439724 ING5Q8WYH8 240 aa11.67□□□□□ -0.54
SMAD3-202ENST00000439724 FAM161BQ96MY7 647 aa11.67□□□□□ -0.54
SMAD3-202ENST00000439724 LENG8Q96PV6 779 aaPredicted RBP11.67□□□□□ -0.54
SMAD3-202ENST00000439724 LBHD1Q9BQE6 289 aaPredicted RBP11.67□□□□□ -0.54
SMAD3-202ENST00000439724 ZDHHC6Q9H6R6 413 aa11.67□□□□□ -0.54
SMAD3-202ENST00000439724 SLCO3A1Q9UIG8 710 aa11.67□□□□□ -0.54
SMAD3-202ENST00000439724 FBXO10Q9UK96 956 aa11.67□□□□□ -0.54
SMAD3-202ENST00000439724 ERVW-1Q9UQF0 538 aa11.67□□□□□ -0.54
SMAD3-202ENST00000439724 RGSL1A5PLK6 1076 aa11.66□□□□□ -0.54
SMAD3-202ENST00000439724 PER2O15055 1255 aa11.66□□□□□ -0.54
SMAD3-202ENST00000439724 ENTPD5O75356 428 aa11.66□□□□□ -0.54
SMAD3-202ENST00000439724 CDK14O94921 469 aa11.66□□□□□ -0.54
SMAD3-202ENST00000439724 SIX3O95343 332 aaPredicted RBP11.66□□□□□ -0.54
SMAD3-202ENST00000439724 UGT2B4P06133 528 aa11.66□□□□□ -0.54
SMAD3-202ENST00000439724 CA3P07451 260 aa11.66□□□□□ -0.54
SMAD3-202ENST00000439724 POLR2EP19388 210 aaKnown RBP11.66□□□□□ -0.54
SMAD3-202ENST00000439724 EEF1DP29692 281 aaKnown RBP11.66□□□□□ -0.54
SMAD3-202ENST00000439724 CA5AP35218 305 aa11.66□□□□□ -0.54
SMAD3-202ENST00000439724 RECQLP46063 649 aaPredicted RBP11.66□□□□□ -0.54
SMAD3-202ENST00000439724 ERVK-21P61565 698 aa11.66□□□□□ -0.54
SMAD3-202ENST00000439724 SH3BP2P78314 561 aa11.66□□□□□ -0.54
SMAD3-202ENST00000439724 CHRNA6Q15825 494 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms