RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 ASTE1Q2TB18 679 aaPredicted RBP3.74□□□□□ -1.81
LSM1P1-201ENST00000438629 KCNT1Q5JUK3 1230 aa3.74□□□□□ -1.81
LSM1P1-201ENST00000438629 PAPPA-AS1Q5QFB9 102 aa3.74□□□□□ -1.81
LSM1P1-201ENST00000438629 C18orf63Q68DL7 685 aa3.74□□□□□ -1.81
LSM1P1-201ENST00000438629 CFAP77Q6ZQR2 320 aa3.74□□□□□ -1.81
LSM1P1-201ENST00000438629 SZRD1Q7Z422 152 aa3.74□□□□□ -1.81
LSM1P1-201ENST00000438629 SDCCAG8Q86SQ7 713 aaPredicted RBP3.74□□□□□ -1.81
LSM1P1-201ENST00000438629 C17orf53Q8N3J3 647 aaPredicted RBP3.74□□□□□ -1.81
LSM1P1-201ENST00000438629 HM13Q8TCT9 377 aa3.74□□□□□ -1.81
LSM1P1-201ENST00000438629 JAKMIP2Q96AA8 810 aa3.74□□□□□ -1.81
LSM1P1-201ENST00000438629 ELMOD3Q96FG2 381 aa3.74□□□□□ -1.81
LSM1P1-201ENST00000438629 TMEM19Q96HH6 336 aa3.74□□□□□ -1.81
LSM1P1-201ENST00000438629 GRAMD2BQ96HH9 432 aa3.74□□□□□ -1.81
LSM1P1-201ENST00000438629 CSF3RQ99062 836 aa3.74□□□□□ -1.81
LSM1P1-201ENST00000438629 CMKLR1Q99788 373 aa3.74□□□□□ -1.81
LSM1P1-201ENST00000438629 NUDT16L1Q9BRJ7 211 aaKnown RBP3.74□□□□□ -1.81
LSM1P1-201ENST00000438629 SETD4Q9NVD3 440 aa3.74□□□□□ -1.81
LSM1P1-201ENST00000438629 C1RLQ9NZP8 487 aa3.74□□□□□ -1.81
LSM1P1-201ENST00000438629 TBC1D29Q9UFV1 150 aa3.74□□□□□ -1.81
LSM1P1-201ENST00000438629 POU2F3Q9UKI9 436 aa3.74□□□□□ -1.81
LSM1P1-201ENST00000438629 TCERG1O14776 1098 aaKnown RBP3.73□□□□□ -1.81
LSM1P1-201ENST00000438629 MID1O15344 667 aa3.73□□□□□ -1.81
LSM1P1-201ENST00000438629 TPPPO94811 219 aa3.73□□□□□ -1.81
LSM1P1-201ENST00000438629 KDM4BO94953 1096 aa3.73□□□□□ -1.81
LSM1P1-201ENST00000438629 ICAM1P05362 532 aa3.73□□□□□ -1.81
LSM1P1-201ENST00000438629 LINC00271P0C7V0 271 aa3.73□□□□□ -1.81
LSM1P1-201ENST00000438629 S1PR1P21453 382 aa3.73□□□□□ -1.81
LSM1P1-201ENST00000438629 TNFRSF8P28908 595 aa3.73□□□□□ -1.81
LSM1P1-201ENST00000438629 GNL1P36915 607 aaPredicted RBP3.73□□□□□ -1.81
LSM1P1-201ENST00000438629 USP8P40818 1118 aa3.73□□□□□ -1.81
LSM1P1-201ENST00000438629 APOBEC1P41238 236 aaKnown RBP3.73□□□□□ -1.81
LSM1P1-201ENST00000438629 MSH2P43246 934 aa3.73□□□□□ -1.81
LSM1P1-201ENST00000438629 TERF1P54274 439 aa3.73□□□□□ -1.81
LSM1P1-201ENST00000438629 MFAP4P55083 255 aa3.73□□□□□ -1.81
LSM1P1-201ENST00000438629 GRSF1Q12849 480 aaKnown RBP eCLIP3.73□□□□□ -1.81
LSM1P1-201ENST00000438629 CDC16Q13042 620 aa3.73□□□□□ -1.81
LSM1P1-201ENST00000438629 KCNC3Q14003 757 aa3.73□□□□□ -1.81
LSM1P1-201ENST00000438629 TMEM35AQ53FP2 167 aa3.73□□□□□ -1.81
LSM1P1-201ENST00000438629 KIAA0930Q6ICG6 404 aaPredicted RBP3.73□□□□□ -1.81
LSM1P1-201ENST00000438629 LCN10Q6JVE6 187 aa3.73□□□□□ -1.81
LSM1P1-201ENST00000438629 PAPD4Q6PIY7 484 aaKnown RBP3.73□□□□□ -1.81
LSM1P1-201ENST00000438629 FAM43BQ6ZT52 329 aaPredicted RBP3.73□□□□□ -1.81
LSM1P1-201ENST00000438629 EXOC3L1Q86VI1 746 aa3.73□□□□□ -1.81
LSM1P1-201ENST00000438629 SFR1Q86XK3 245 aa3.73□□□□□ -1.81
LSM1P1-201ENST00000438629 FAM9BQ8IZU0 186 aa3.73□□□□□ -1.81
LSM1P1-201ENST00000438629 EMC1Q8N766 993 aa3.73□□□□□ -1.81
LSM1P1-201ENST00000438629 HJURPQ8NCD3 748 aaPredicted RBP3.73□□□□□ -1.81
LSM1P1-201ENST00000438629 LILRB1Q8NHL6 650 aaPredicted RBP3.73□□□□□ -1.81
LSM1P1-201ENST00000438629 FIG4Q92562 907 aa3.73□□□□□ -1.81
LSM1P1-201ENST00000438629 LRRC59Q96AG4 307 aaKnown RBP3.73□□□□□ -1.81
LSM1P1-201ENST00000438629 IGSF21Q96ID5 467 aa3.73□□□□□ -1.81
LSM1P1-201ENST00000438629 RSRC1Q96IZ7 334 aaKnown RBP3.73□□□□□ -1.81
LSM1P1-201ENST00000438629 EGLN2Q96KS0 407 aa3.73□□□□□ -1.81
LSM1P1-201ENST00000438629 DACH2Q96NX9 599 aa3.73□□□□□ -1.81
LSM1P1-201ENST00000438629 SEMA3CQ99985 751 aa3.73□□□□□ -1.81
LSM1P1-201ENST00000438629 OSGEPL1Q9H4B0 414 aa3.73□□□□□ -1.81
LSM1P1-201ENST00000438629 GAREM1Q9H706 876 aa3.73□□□□□ -1.81
LSM1P1-201ENST00000438629 FKRPQ9H9S5 495 aa3.73□□□□□ -1.81
LSM1P1-201ENST00000438629 SEBOXQ9HB31 216 aaPredicted RBP3.73□□□□□ -1.81
LSM1P1-201ENST00000438629 TMEM30AQ9NV96 361 aa3.73□□□□□ -1.81
LSM1P1-201ENST00000438629 ADD3Q9UEY8 706 aaKnown RBP3.73□□□□□ -1.81
LSM1P1-201ENST00000438629 SEC63Q9UGP8 760 aaKnown RBP3.73□□□□□ -1.81
LSM1P1-201ENST00000438629 KLHL20Q9Y2M5 609 aa3.73□□□□□ -1.81
LSM1P1-201ENST00000438629 TAF1P21675 1872 aa3.73□□□□□ -1.81
LSM1P1-201ENST00000438629 PTPRCP08575 1304 aa3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 LOC100509620A0A075B734 347 aa3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 SAA2-SAA4A0A096LPE2 208 aa3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 A0A0G2JPF8 293 aa3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 A0A1W2PQ09 198 aa3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 EME2A4GXA9 379 aaPredicted RBP3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 HNRNPCL3B7ZW38 293 aa3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 FAM90A26D6RGX4 464 aa3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 H3BQ06 376 aaPredicted RBP3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 CLGNO14967 610 aa3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 SLC16A5O15375 505 aa3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 ZNF500O60304 480 aaPredicted RBP3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 MITFO75030 526 aaPredicted RBP3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 CAMTA2O94983 1202 aa3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 ZBTB11O95625 1053 aaPredicted RBP3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 HNRNPCL4P0DMR1 293 aa3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 PORP16435 677 aaPredicted RBP3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 GCH1P30793 250 aa3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 IRF3Q14653 427 aa3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 NTRK2Q16620 822 aa3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 C15orf59Q2T9L4 293 aaPredicted RBP3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 ZNF324BQ6AW86 544 aaPredicted RBP3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 CAPRIN2Q6IMN6 1127 aaKnown RBP3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 KIAA1161Q6NSJ0 714 aa3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 SPSB3Q6PJ21 355 aa3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 UNQ6126/PRO20091Q6UXV3 157 aa3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 TPRG1Q6ZUI0 275 aa3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 C16orf82Q7Z2V1 217 aa3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 RBM23Q86U06 439 aaKnown RBP3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 CCDC190Q86UF4 302 aa3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 NRROSQ86YC3 692 aa3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 ZNF34Q8IZ26 560 aa3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 CCDC89Q8N998 374 aa3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 POC5Q8NA72 575 aa3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 UTP15Q8TED0 518 aaKnown RBP3.72□□□□□ -1.81
LSM1P1-201ENST00000438629 SNRNP27Q8WVK2 155 aaKnown RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms