RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 NEDD8-MDP1E9PL57 170 aa25.51■■□□□ 1.67
CPNE1-216ENST00000437340 GAPDHSO14556 408 aaPredicted RBP25.51■■□□□ 1.67
CPNE1-216ENST00000437340 TSPAN12O95859 305 aa25.51■■□□□ 1.67
CPNE1-216ENST00000437340 POU2F2P09086 479 aa25.51■■□□□ 1.67
CPNE1-216ENST00000437340 PABPC1P11940 636 aaKnown RBP25.51■■□□□ 1.67
CPNE1-216ENST00000437340 GFAPP14136 432 aa25.51■■□□□ 1.67
CPNE1-216ENST00000437340 ZNF7P17097 686 aaPredicted RBP25.51■■□□□ 1.67
CPNE1-216ENST00000437340 ITGALP20701 1170 aa25.51■■□□□ 1.67
CPNE1-216ENST00000437340 STK19P49842 368 aaPredicted RBP25.51■■□□□ 1.67
CPNE1-216ENST00000437340 SLC25A3Q00325 362 aa25.51■■□□□ 1.67
CPNE1-216ENST00000437340 KPNB1Q14974 876 aaKnown RBP25.51■■□□□ 1.67
CPNE1-216ENST00000437340 PFKFB4Q16877 469 aa25.51■■□□□ 1.67
CPNE1-216ENST00000437340 PRSS36Q5K4E3 855 aa25.51■■□□□ 1.67
CPNE1-216ENST00000437340 EXT2Q93063 718 aa25.51■■□□□ 1.67
CPNE1-216ENST00000437340 VOPP1Q96AW1 172 aa25.51■■□□□ 1.67
CPNE1-216ENST00000437340 HECAQ9UBI9 543 aaPredicted RBP25.51■■□□□ 1.67
CPNE1-216ENST00000437340 LOC100653049A0A140TA62 436 aa25.5■■□□□ 1.67
CPNE1-216ENST00000437340 UBFD1O14562 309 aaKnown RBP25.5■■□□□ 1.67
CPNE1-216ENST00000437340 KLK8O60259 260 aa25.5■■□□□ 1.67
CPNE1-216ENST00000437340 CLASP2O75122 1294 aaKnown RBP25.5■■□□□ 1.67
CPNE1-216ENST00000437340 KRT34O76011 436 aa25.5■■□□□ 1.67
CPNE1-216ENST00000437340 PRAMEF1O95521 474 aa25.5■■□□□ 1.67
CPNE1-216ENST00000437340 FGF4P08620 206 aa25.5■■□□□ 1.67
CPNE1-216ENST00000437340 CHRM3P20309 590 aa25.5■■□□□ 1.67
CPNE1-216ENST00000437340 E2F5Q15329 346 aa25.5■■□□□ 1.67
CPNE1-216ENST00000437340 TSNQ15631 228 aaKnown RBP25.5■■□□□ 1.67
CPNE1-216ENST00000437340 ZRSR2Q15696 482 aaKnown RBP25.5■■□□□ 1.67
CPNE1-216ENST00000437340 KHDC1Q4VXA5 237 aaKnown RBP25.5■■□□□ 1.67
CPNE1-216ENST00000437340 PPP2R2DQ66LE6 453 aa25.5■■□□□ 1.67
CPNE1-216ENST00000437340 ELMSAN1Q6PJG2 1045 aa25.5■■□□□ 1.67
CPNE1-216ENST00000437340 RPS27LQ71UM5 84 aaKnown RBP25.5■■□□□ 1.67
CPNE1-216ENST00000437340 SIDT2Q8NBJ9 832 aaKnown RBP25.5■■□□□ 1.67
CPNE1-216ENST00000437340 SLC30A3Q99726 388 aa25.5■■□□□ 1.67
CPNE1-216ENST00000437340 TNFRSF12AQ9NP84 129 aa25.5■■□□□ 1.67
CPNE1-216ENST00000437340 GALPQ9UBC7 116 aa25.5■■□□□ 1.67
CPNE1-216ENST00000437340 DPP7Q9UHL4 492 aa25.5■■□□□ 1.67
CPNE1-216ENST00000437340 MSRAQ9UJ68 235 aa25.5■■□□□ 1.67
CPNE1-216ENST00000437340 TRANK1O15050 2925 aa25.5■■□□□ 1.67
CPNE1-216ENST00000437340 TRBV5-4A0A0C4DH59 114 aa25.49■■□□□ 1.67
CPNE1-216ENST00000437340 A0A1W2PQ67 120 aa25.49■■□□□ 1.67
CPNE1-216ENST00000437340 STX16-NPEPL1H3BU86 382 aa25.49■■□□□ 1.67
CPNE1-216ENST00000437340 STX16O14662 325 aa25.49■■□□□ 1.67
CPNE1-216ENST00000437340 CLDN7O95471 211 aa25.49■■□□□ 1.67
CPNE1-216ENST00000437340 EPCAMP16422 314 aa25.49■■□□□ 1.67
CPNE1-216ENST00000437340 NFATC2Q13469 925 aa25.49■■□□□ 1.67
CPNE1-216ENST00000437340 RAB30Q15771 203 aa25.49■■□□□ 1.67
CPNE1-216ENST00000437340 CARD16Q5EG05 197 aa25.49■■□□□ 1.67
CPNE1-216ENST00000437340 ACSBG2Q5FVE4 666 aa25.49■■□□□ 1.67
CPNE1-216ENST00000437340 SWT1Q5T5J6 900 aaKnown RBP25.49■■□□□ 1.67
CPNE1-216ENST00000437340 ASTLQ6HA08 431 aaPredicted RBP25.49■■□□□ 1.67
CPNE1-216ENST00000437340 GRAMD4Q6IC98 578 aa25.49■■□□□ 1.67
CPNE1-216ENST00000437340 TXNDC11Q6PKC3 985 aa25.49■■□□□ 1.67
CPNE1-216ENST00000437340 FAM151BQ6UXP7 276 aa25.49■■□□□ 1.67
CPNE1-216ENST00000437340 CHSY3Q70JA7 882 aa25.49■■□□□ 1.67
CPNE1-216ENST00000437340 RBFAQ8N0V3 343 aa25.49■■□□□ 1.67
CPNE1-216ENST00000437340 CLYBLQ8N0X4 340 aa25.49■■□□□ 1.67
CPNE1-216ENST00000437340 PELI3Q8N2H9 469 aa25.49■■□□□ 1.67
CPNE1-216ENST00000437340 FBXO39Q8N4B4 442 aa25.49■■□□□ 1.67
CPNE1-216ENST00000437340 GIMAP7Q8NHV1 300 aa25.49■■□□□ 1.67
CPNE1-216ENST00000437340 WDR60Q8WVS4 1066 aa25.49■■□□□ 1.67
CPNE1-216ENST00000437340 FUBP1Q96AE4 644 aaKnown RBP25.49■■□□□ 1.67
CPNE1-216ENST00000437340 SCRN2Q96FV2 425 aa25.49■■□□□ 1.67
CPNE1-216ENST00000437340 PDLIM5Q96HC4 596 aaKnown RBP25.49■■□□□ 1.67
CPNE1-216ENST00000437340 ZNF641Q96N77 438 aaPredicted RBP25.49■■□□□ 1.67
CPNE1-216ENST00000437340 C1QTNF3Q9BXJ4 246 aa25.49■■□□□ 1.67
CPNE1-216ENST00000437340 SUV39H2Q9H5I1 410 aa25.49■■□□□ 1.67
CPNE1-216ENST00000437340 ZBTB26Q9HCK0 441 aa25.49■■□□□ 1.67
CPNE1-216ENST00000437340 ZDHHC7Q9NXF8 308 aa25.49■■□□□ 1.67
CPNE1-216ENST00000437340 SLC7A8Q9UHI5 535 aa25.49■■□□□ 1.67
CPNE1-216ENST00000437340 A0A088AWK7 358 aa25.49■■□□□ 1.67
CPNE1-216ENST00000437340 SUPT3HB4E1H0 165 aa25.49■■□□□ 1.67
CPNE1-216ENST00000437340 SUPT3HO75486 399 aa25.49■■□□□ 1.67
CPNE1-216ENST00000437340 ECI2O75521 394 aa25.49■■□□□ 1.67
CPNE1-216ENST00000437340 POP4O95707 220 aaKnown RBP25.49■■□□□ 1.67
CPNE1-216ENST00000437340 CLCN7P51798 805 aa25.49■■□□□ 1.67
CPNE1-216ENST00000437340 GPR33Q49SQ1 333 aa25.49■■□□□ 1.67
CPNE1-216ENST00000437340 PREPLQ4J6C6 727 aaPredicted RBP25.49■■□□□ 1.67
CPNE1-216ENST00000437340 SERPINA9Q86WD7 417 aa25.49■■□□□ 1.67
CPNE1-216ENST00000437340 CATSPER2Q96P56 530 aa25.49■■□□□ 1.67
CPNE1-216ENST00000437340 ASB8Q9H765 288 aa25.49■■□□□ 1.67
CPNE1-216ENST00000437340 IL26Q9NPH9 171 aa25.49■■□□□ 1.67
CPNE1-216ENST00000437340 MARK1Q9P0L2 795 aa25.49■■□□□ 1.67
CPNE1-216ENST00000437340 NKX1-2Q9UD57 310 aaPredicted RBP25.49■■□□□ 1.67
CPNE1-216ENST00000437340 IKZF3Q9UKT9 509 aa25.49■■□□□ 1.67
CPNE1-216ENST00000437340 DHRS7Q9Y394 339 aa25.49■■□□□ 1.67
CPNE1-216ENST00000437340 BTN3A1O00481 513 aa25.48■■□□□ 1.67
CPNE1-216ENST00000437340 ZNF197O14709 1029 aa25.48■■□□□ 1.67
CPNE1-216ENST00000437340 SKAP2O75563 359 aaPredicted RBP25.48■■□□□ 1.67
CPNE1-216ENST00000437340 TYRP14679 529 aa25.48■■□□□ 1.67
CPNE1-216ENST00000437340 SPAM1P38567 509 aa25.48■■□□□ 1.67
CPNE1-216ENST00000437340 ECT2LQ008S8 904 aa25.48■■□□□ 1.67
CPNE1-216ENST00000437340 CUL3Q13618 768 aa25.48■■□□□ 1.67
CPNE1-216ENST00000437340 CYLC2Q14093 348 aaPredicted RBP25.48■■□□□ 1.67
CPNE1-216ENST00000437340 PDE12Q6L8Q7 609 aaKnown RBP25.48■■□□□ 1.67
CPNE1-216ENST00000437340 TPRG1Q6ZUI0 275 aa25.48■■□□□ 1.67
CPNE1-216ENST00000437340 USP45Q70EL2 814 aa25.48■■□□□ 1.67
CPNE1-216ENST00000437340 ZSWIM9Q86XI8 627 aa25.48■■□□□ 1.67
CPNE1-216ENST00000437340 PLPP6Q8IY26 295 aa25.48■■□□□ 1.67
CPNE1-216ENST00000437340 GDPD5Q8WTR4 605 aa25.48■■□□□ 1.67
CPNE1-216ENST00000437340 LINGO1Q96FE5 620 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms