RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 RNF31Q96EP0 1072 aa10.35□□□□□ -0.75
CPNE1-214ENST00000435747 AHCYL2Q96HN2 611 aaKnown RBP10.35□□□□□ -0.75
CPNE1-214ENST00000435747 EXOC2Q96KP1 924 aa10.35□□□□□ -0.75
CPNE1-214ENST00000435747 WRAP53Q9BUR4 548 aaKnown RBP10.35□□□□□ -0.75
CPNE1-214ENST00000435747 ING2Q9H160 280 aa10.35□□□□□ -0.75
CPNE1-214ENST00000435747 DHX35Q9H5Z1 703 aaKnown RBP10.35□□□□□ -0.75
CPNE1-214ENST00000435747 FGF22Q9HCT0 170 aa10.35□□□□□ -0.75
CPNE1-214ENST00000435747 SPATS2LQ9NUQ6 558 aaKnown RBP10.35□□□□□ -0.75
CPNE1-214ENST00000435747 PDP2Q9P2J9 529 aa10.35□□□□□ -0.75
CPNE1-214ENST00000435747 UBA2Q9UBT2 640 aaPredicted RBP10.35□□□□□ -0.75
CPNE1-214ENST00000435747 MOSPD1Q9UJG1 213 aa10.35□□□□□ -0.75
CPNE1-214ENST00000435747 CAPN11Q9UMQ6 739 aa10.35□□□□□ -0.75
CPNE1-214ENST00000435747 COQ6Q9Y2Z9 468 aa10.35□□□□□ -0.75
CPNE1-214ENST00000435747 PCDHGA6Q9Y5G7 932 aa10.35□□□□□ -0.75
CPNE1-214ENST00000435747 KLF2Q9Y5W3 355 aaPredicted RBP10.35□□□□□ -0.75
CPNE1-214ENST00000435747 SCINQ9Y6U3 715 aa10.35□□□□□ -0.75
CPNE1-214ENST00000435747 A0A087X0T9 212 aa10.34□□□□□ -0.75
CPNE1-214ENST00000435747 CACNB4O00305 520 aaPredicted RBP10.34□□□□□ -0.75
CPNE1-214ENST00000435747 TRAFD1O14545 582 aaPredicted RBP10.34□□□□□ -0.75
CPNE1-214ENST00000435747 PRICKLE3O43900 615 aaPredicted RBP10.34□□□□□ -0.75
CPNE1-214ENST00000435747 SERPINC1P01008 464 aa10.34□□□□□ -0.75
CPNE1-214ENST00000435747 PCCBP05166 539 aa10.34□□□□□ -0.75
CPNE1-214ENST00000435747 CYP1A2P05177 515 aa10.34□□□□□ -0.75
CPNE1-214ENST00000435747 FGF1P05230 155 aa10.34□□□□□ -0.75
CPNE1-214ENST00000435747 FAM228BP0C875 321 aa10.34□□□□□ -0.75
CPNE1-214ENST00000435747 CD99P14209 185 aa10.34□□□□□ -0.75
CPNE1-214ENST00000435747 GM2AP17900 193 aa10.34□□□□□ -0.75
CPNE1-214ENST00000435747 CAPN3P20807 821 aa10.34□□□□□ -0.75
CPNE1-214ENST00000435747 KELP23276 732 aa10.34□□□□□ -0.75
CPNE1-214ENST00000435747 IL4RP24394 825 aa10.34□□□□□ -0.75
CPNE1-214ENST00000435747 HNRNPH3P31942 346 aaKnown RBP10.34□□□□□ -0.75
CPNE1-214ENST00000435747 SUOXP51687 545 aa10.34□□□□□ -0.75
CPNE1-214ENST00000435747 ZNF135P52742 658 aaPredicted RBP10.34□□□□□ -0.75
CPNE1-214ENST00000435747 GPLD1P80108 840 aa10.34□□□□□ -0.75
CPNE1-214ENST00000435747 ZBED6P86452 979 aa10.34□□□□□ -0.75
CPNE1-214ENST00000435747 ART3Q13508 389 aa10.34□□□□□ -0.75
CPNE1-214ENST00000435747 UGP2Q16851 508 aa10.34□□□□□ -0.75
CPNE1-214ENST00000435747 TSR1Q2NL82 804 aaKnown RBP10.34□□□□□ -0.75
CPNE1-214ENST00000435747 POLNQ7Z5Q5 900 aa10.34□□□□□ -0.75
CPNE1-214ENST00000435747 GLIS1Q8NBF1 620 aa10.34□□□□□ -0.75
CPNE1-214ENST00000435747 TSEN2Q8NCE0 465 aaKnown RBP10.34□□□□□ -0.75
CPNE1-214ENST00000435747 ST6GALNAC3Q8NDV1 305 aa10.34□□□□□ -0.75
CPNE1-214ENST00000435747 TRIM11Q96F44 468 aa10.34□□□□□ -0.75
CPNE1-214ENST00000435747 ZNF641Q96N77 438 aaPredicted RBP10.34□□□□□ -0.75
CPNE1-214ENST00000435747 TUBGCP5Q96RT8 1024 aa10.34□□□□□ -0.75
CPNE1-214ENST00000435747 TRIM8Q9BZR9 551 aa10.34□□□□□ -0.75
CPNE1-214ENST00000435747 THAP2Q9H0W7 228 aa10.34□□□□□ -0.75
CPNE1-214ENST00000435747 SUV39H2Q9H5I1 410 aa10.34□□□□□ -0.75
CPNE1-214ENST00000435747 CHST11Q9NPF2 352 aa10.34□□□□□ -0.75
CPNE1-214ENST00000435747 ETNK2Q9NVF9 386 aa10.34□□□□□ -0.75
CPNE1-214ENST00000435747 OSGIN2Q9Y236 505 aa10.34□□□□□ -0.75
CPNE1-214ENST00000435747 COPG1Q9Y678 874 aaKnown RBP10.34□□□□□ -0.75
CPNE1-214ENST00000435747 BZW2Q9Y6E2 419 aaKnown RBP10.34□□□□□ -0.75
CPNE1-214ENST00000435747 TMEM202A6NGA9 273 aa10.33□□□□□ -0.76
CPNE1-214ENST00000435747 ARHGAP42A6NI28 874 aa10.33□□□□□ -0.76
CPNE1-214ENST00000435747 BHMG1C9JSJ3 638 aaPredicted RBP10.33□□□□□ -0.76
CPNE1-214ENST00000435747 PPM1DO15297 605 aa10.33□□□□□ -0.76
CPNE1-214ENST00000435747 PRPSAP2O60256 369 aa10.33□□□□□ -0.76
CPNE1-214ENST00000435747 RNF8O76064 485 aa10.33□□□□□ -0.76
CPNE1-214ENST00000435747 MAP3K6O95382 1288 aa10.33□□□□□ -0.76
CPNE1-214ENST00000435747 SERPING1P05155 500 aa10.33□□□□□ -0.76
CPNE1-214ENST00000435747 CCNYL3P0C7X3 344 aa10.33□□□□□ -0.76
CPNE1-214ENST00000435747 RARAP10276 462 aa10.33□□□□□ -0.76
CPNE1-214ENST00000435747 CCNB1P14635 433 aa10.33□□□□□ -0.76
CPNE1-214ENST00000435747 ZNF28P17035 718 aa10.33□□□□□ -0.76
CPNE1-214ENST00000435747 SSTR2P30874 369 aa10.33□□□□□ -0.76
CPNE1-214ENST00000435747 MMP12P39900 470 aa10.33□□□□□ -0.76
CPNE1-214ENST00000435747 ARSEP51690 589 aa10.33□□□□□ -0.76
CPNE1-214ENST00000435747 UBASH3AP57075 661 aa10.33□□□□□ -0.76
CPNE1-214ENST00000435747 KIAA1024LP59773 190 aa10.33□□□□□ -0.76
CPNE1-214ENST00000435747 IL10RBQ08334 325 aa10.33□□□□□ -0.76
CPNE1-214ENST00000435747 NSUN2Q08J23 767 aaKnown RBP eCLIP10.33□□□□□ -0.76
CPNE1-214ENST00000435747 SLC10A7Q0GE19 358 aa10.33□□□□□ -0.76
CPNE1-214ENST00000435747 RALGDSQ12967 914 aa10.33□□□□□ -0.76
CPNE1-214ENST00000435747 MTM1Q13496 603 aa10.33□□□□□ -0.76
CPNE1-214ENST00000435747 GRM3Q14832 879 aa10.33□□□□□ -0.76
CPNE1-214ENST00000435747 UGT8Q16880 541 aa10.33□□□□□ -0.76
CPNE1-214ENST00000435747 ASTE1Q2TB18 679 aaPredicted RBP10.33□□□□□ -0.76
CPNE1-214ENST00000435747 PLEKHN1Q494U1 663 aaPredicted RBP10.33□□□□□ -0.76
CPNE1-214ENST00000435747 PPP6R3Q5H9R7 873 aaPredicted RBP10.33□□□□□ -0.76
CPNE1-214ENST00000435747 ARHGAP22Q7Z5H3 698 aa10.33□□□□□ -0.76
CPNE1-214ENST00000435747 CAMK1DQ8IU85 385 aa10.33□□□□□ -0.76
CPNE1-214ENST00000435747 NXPE1Q8N323 547 aa10.33□□□□□ -0.76
CPNE1-214ENST00000435747 OR10G6Q8NH81 332 aa10.33□□□□□ -0.76
CPNE1-214ENST00000435747 FUBP1Q96AE4 644 aaKnown RBP10.33□□□□□ -0.76
CPNE1-214ENST00000435747 CSPG4P5Q96PW8 444 aa10.33□□□□□ -0.76
CPNE1-214ENST00000435747 PSKH2Q96QS6 385 aa10.33□□□□□ -0.76
CPNE1-214ENST00000435747 GSDMCQ9BYG8 508 aa10.33□□□□□ -0.76
CPNE1-214ENST00000435747 ACTL8Q9H568 366 aa10.33□□□□□ -0.76
CPNE1-214ENST00000435747 MRPL47Q9HD33 250 aaKnown RBP10.33□□□□□ -0.76
CPNE1-214ENST00000435747 PCDH12Q9NPG4 1184 aa10.33□□□□□ -0.76
CPNE1-214ENST00000435747 TAAR2Q9P1P5 351 aa10.33□□□□□ -0.76
CPNE1-214ENST00000435747 NSD1Q96L73 2696 aaPredicted RBP10.32□□□□□ -0.76
CPNE1-214ENST00000435747 FLNAP21333 2647 aaKnown RBP10.32□□□□□ -0.76
CPNE1-214ENST00000435747 ATRQ13535 2644 aa10.32□□□□□ -0.76
CPNE1-214ENST00000435747 CACNA1CQ13936 2221 aa10.32□□□□□ -0.76
CPNE1-214ENST00000435747 TNFRSF10CO14798 259 aa10.32□□□□□ -0.76
CPNE1-214ENST00000435747 MAFKO60675 156 aa10.32□□□□□ -0.76
CPNE1-214ENST00000435747 GARSP41250 739 aaKnown RBP10.32□□□□□ -0.76
CPNE1-214ENST00000435747 RAD51Q06609 339 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms