RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 ARSAP15289 507 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 CORO1AP31146 461 aaKnown RBP10.35□□□□□ -0.75
CD44-210ENST00000434472 GRIA2P42262 883 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 PTGER3P43115 390 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 RGRP47804 291 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 RPS24P62847 133 aaKnown RBP10.35□□□□□ -0.75
CD44-210ENST00000434472 IKBKEQ14164 716 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 GRB7Q14451 532 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 TSNQ15631 228 aaKnown RBP10.35□□□□□ -0.75
CD44-210ENST00000434472 RBBP7Q16576 425 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 INO80DQ53TQ3 878 aaPredicted RBP10.35□□□□□ -0.75
CD44-210ENST00000434472 ZRANB3Q5FWF4 1079 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 ADGRF1Q5T601 910 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 THEMIS2Q5TEJ8 643 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 RNF219Q5W0B1 726 aaPredicted RBP10.35□□□□□ -0.75
CD44-210ENST00000434472 LCN8Q6JVE9 175 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 NCEH1Q6PIU2 408 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 BLOC1S3Q6QNY0 202 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 PRR23BQ6ZRT6 265 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 ERMP1Q7Z2K6 904 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 GPSM1Q86YR5 675 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 REM2Q8IYK8 340 aaPredicted RBP10.35□□□□□ -0.75
CD44-210ENST00000434472 PXYLP1Q8TE99 480 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 KCNJ9Q92806 393 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 SLCO4A1Q96BD0 722 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 PDLIM5Q96HC4 596 aaKnown RBP10.35□□□□□ -0.75
CD44-210ENST00000434472 PRICKLE1Q96MT3 831 aaPredicted RBP10.35□□□□□ -0.75
CD44-210ENST00000434472 NSUN5Q96P11 429 aaKnown RBP10.35□□□□□ -0.75
CD44-210ENST00000434472 HGH1Q9BTY7 390 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 TUBB1Q9H4B7 451 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 COQ10BQ9H8M1 238 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 SEMA4BQ9NPR2 832 aaPredicted RBP10.35□□□□□ -0.75
CD44-210ENST00000434472 CCM2LQ9NUG4 571 aaPredicted RBP10.35□□□□□ -0.75
CD44-210ENST00000434472 AIG1Q9NVV5 245 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 UBAP1Q9NZ09 502 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 NUDT4Q9NZJ9 180 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 ACTR3BQ9P1U1 418 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 MAP10Q9P2G4 905 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 AFF4Q9UHB7 1163 aaKnown RBP10.35□□□□□ -0.75
CD44-210ENST00000434472 FKBPLQ9UIM3 349 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 LEF1Q9UJU2 399 aaPredicted RBP10.35□□□□□ -0.75
CD44-210ENST00000434472 PCTPQ9UKL6 214 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 CNOT6Q9ULM6 557 aaKnown RBP10.35□□□□□ -0.75
CD44-210ENST00000434472 PHF24Q9UPV7 400 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 FAM50BQ9Y247 325 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 PCDHB1Q9Y5F3 818 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 SNX13Q9Y5W8 968 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 GPR45Q9Y5Y3 372 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 GREB1Q4ZG55 1949 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 A0A1W2PP18 115 aa10.34□□□□□ -0.75
CD44-210ENST00000434472 KANSL1LA0AUZ9 987 aa10.34□□□□□ -0.75
CD44-210ENST00000434472 LRRC14BA6NHZ5 514 aa10.34□□□□□ -0.75
CD44-210ENST00000434472 ZNF839A8K0R7 811 aa10.34□□□□□ -0.75
CD44-210ENST00000434472 CBX4O00257 560 aa10.34□□□□□ -0.75
CD44-210ENST00000434472 CDC7O00311 574 aa10.34□□□□□ -0.75
CD44-210ENST00000434472 IFRD1O00458 451 aaPredicted RBP10.34□□□□□ -0.75
CD44-210ENST00000434472 NBNO60934 754 aa10.34□□□□□ -0.75
CD44-210ENST00000434472 STC2O76061 302 aa10.34□□□□□ -0.75
CD44-210ENST00000434472 GJB5O95377 273 aa10.34□□□□□ -0.75
CD44-210ENST00000434472 S100BP04271 92 aaPredicted RBP10.34□□□□□ -0.75
CD44-210ENST00000434472 CYBBP04839 570 aa10.34□□□□□ -0.75
CD44-210ENST00000434472 FCGR1AP12314 374 aa10.34□□□□□ -0.75
CD44-210ENST00000434472 CAPN3P20807 821 aa10.34□□□□□ -0.75
CD44-210ENST00000434472 GATMP50440 423 aa10.34□□□□□ -0.75
CD44-210ENST00000434472 FOXA1P55317 472 aa10.34□□□□□ -0.75
CD44-210ENST00000434472 CDKL1Q00532 357 aa10.34□□□□□ -0.75
CD44-210ENST00000434472 MYBPC1Q00872 1141 aa10.34□□□□□ -0.75
CD44-210ENST00000434472 CACNG1Q06432 222 aa10.34□□□□□ -0.75
CD44-210ENST00000434472 MAP7Q14244 749 aa10.34□□□□□ -0.75
CD44-210ENST00000434472 TAF12Q16514 161 aa10.34□□□□□ -0.75
CD44-210ENST00000434472 XKR7Q5GH72 579 aa10.34□□□□□ -0.75
CD44-210ENST00000434472 C6orf52Q5T4I8 152 aa10.34□□□□□ -0.75
CD44-210ENST00000434472 PRSS55Q6UWB4 352 aaPredicted RBP10.34□□□□□ -0.75
CD44-210ENST00000434472 CERS6Q6ZMG9 384 aa10.34□□□□□ -0.75
CD44-210ENST00000434472 GPRIN3Q6ZVF9 776 aa10.34□□□□□ -0.75
CD44-210ENST00000434472 RETREG3Q86VR2 466 aa10.34□□□□□ -0.75
CD44-210ENST00000434472 CHERPQ8IWX8 916 aaKnown RBP10.34□□□□□ -0.75
CD44-210ENST00000434472 SLC15A3Q8IY34 581 aa10.34□□□□□ -0.75
CD44-210ENST00000434472 LRRC43Q8N309 656 aa10.34□□□□□ -0.75
CD44-210ENST00000434472 TTC30BQ8N4P2 665 aa10.34□□□□□ -0.75
CD44-210ENST00000434472 RAET1EQ8TD07 263 aa10.34□□□□□ -0.75
CD44-210ENST00000434472 LRRC58Q96CX6 371 aa10.34□□□□□ -0.75
CD44-210ENST00000434472 LINGO1Q96FE5 620 aa10.34□□□□□ -0.75
CD44-210ENST00000434472 MYRFLQ96LU7 910 aa10.34□□□□□ -0.75
CD44-210ENST00000434472 BIRC8Q96P09 236 aa10.34□□□□□ -0.75
CD44-210ENST00000434472 ZIC5Q96T25 663 aa10.34□□□□□ -0.75
CD44-210ENST00000434472 C19orf43Q9BQ61 176 aa10.34□□□□□ -0.75
CD44-210ENST00000434472 KLF16Q9BXK1 252 aaPredicted RBP10.34□□□□□ -0.75
CD44-210ENST00000434472 MUC3BQ9H195 1237 aa10.34□□□□□ -0.75
CD44-210ENST00000434472 CD274Q9NZQ7 290 aa10.34□□□□□ -0.75
CD44-210ENST00000434472 ZIM2Q9NZV7 527 aa10.34□□□□□ -0.75
CD44-210ENST00000434472 SUN2Q9UH99 717 aa10.34□□□□□ -0.75
CD44-210ENST00000434472 BTRCQ9Y297 605 aa10.34□□□□□ -0.75
CD44-210ENST00000434472 MED16Q9Y2X0 877 aa10.34□□□□□ -0.75
CD44-210ENST00000434472 TNPO3Q9Y5L0 923 aaKnown RBP10.34□□□□□ -0.75
CD44-210ENST00000434472 FAM234BA2RU67 622 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 E5RI56 91 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 PPP6CO00743 305 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 NME4O00746 187 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 EEDO75530 441 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms