RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 POLR3BQ9NW08 1133 aaPredicted RBP11.87□□□□□ -0.51
CTCFL-209ENST00000433949 PKP3Q9Y446 797 aa11.87□□□□□ -0.51
CTCFL-209ENST00000433949 TRAF6Q9Y4K3 522 aa11.87□□□□□ -0.51
CTCFL-209ENST00000433949 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.87□□□□□ -0.51
CTCFL-209ENST00000433949 FZD6O60353 706 aa11.87□□□□□ -0.51
CTCFL-209ENST00000433949 GREM1O60565 184 aa11.87□□□□□ -0.51
CTCFL-209ENST00000433949 SNAP91O60641 907 aa11.87□□□□□ -0.51
CTCFL-209ENST00000433949 PRAMEF12O95522 483 aa11.87□□□□□ -0.51
CTCFL-209ENST00000433949 FGF4P08620 206 aa11.87□□□□□ -0.51
CTCFL-209ENST00000433949 ATP6V1C1P21283 382 aa11.87□□□□□ -0.51
CTCFL-209ENST00000433949 MZF1P28698 734 aaPredicted RBP11.87□□□□□ -0.51
CTCFL-209ENST00000433949 MC4RP32245 332 aa11.87□□□□□ -0.51
CTCFL-209ENST00000433949 NUDT2P50583 147 aa11.87□□□□□ -0.51
CTCFL-209ENST00000433949 EPHA5P54756 1037 aa11.87□□□□□ -0.51
CTCFL-209ENST00000433949 EPHB1P54762 984 aa11.87□□□□□ -0.51
CTCFL-209ENST00000433949 UGT3A1Q6NUS8 523 aa11.87□□□□□ -0.51
CTCFL-209ENST00000433949 RTL10Q7L3V2 364 aa11.87□□□□□ -0.51
CTCFL-209ENST00000433949 CLYBLQ8N0X4 340 aa11.87□□□□□ -0.51
CTCFL-209ENST00000433949 ADAMTS19Q8TE59 1207 aa11.87□□□□□ -0.51
CTCFL-209ENST00000433949 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.87□□□□□ -0.51
CTCFL-209ENST00000433949 ZNF570Q96NI8 536 aa11.87□□□□□ -0.51
CTCFL-209ENST00000433949 ATOH8Q96SQ7 321 aa11.87□□□□□ -0.51
CTCFL-209ENST00000433949 VPS51Q9UID3 782 aa11.87□□□□□ -0.51
CTCFL-209ENST00000433949 COPG1Q9Y678 874 aaKnown RBP11.87□□□□□ -0.51
CTCFL-209ENST00000433949 OAS3Q9Y6K5 1087 aaKnown RBP11.87□□□□□ -0.51
CTCFL-209ENST00000433949 SCN8AQ9UQD0 1980 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 TMEM233B4DJY2 109 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 H3BQ06 376 aaPredicted RBP11.86□□□□□ -0.51
CTCFL-209ENST00000433949 SKAP2O75563 359 aaPredicted RBP11.86□□□□□ -0.51
CTCFL-209ENST00000433949 PKMP14618 531 aaKnown RBP11.86□□□□□ -0.51
CTCFL-209ENST00000433949 ANPEPP15144 967 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 FMO4P31512 558 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 HMGCLP35914 325 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 PTGER3P43115 390 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 CSNK1DP48730 415 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 IRX1P78414 480 aaPredicted RBP11.86□□□□□ -0.51
CTCFL-209ENST00000433949 SLC7A9P82251 487 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 STX5Q13190 355 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 SQLEQ14534 574 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 SKIV2LQ15477 1246 aaKnown RBP11.86□□□□□ -0.51
CTCFL-209ENST00000433949 MPPE1Q53F39 396 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 ARMC12Q5T9G4 340 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 PRPF38BQ5VTL8 546 aaKnown RBP11.86□□□□□ -0.51
CTCFL-209ENST00000433949 LINGO4Q6UY18 593 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 CERS6Q6ZMG9 384 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 HTR3DQ70Z44 454 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 PGAM4Q8N0Y7 254 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 RYBPQ8N488 228 aaPredicted RBP11.86□□□□□ -0.51
CTCFL-209ENST00000433949 TTC30BQ8N4P2 665 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 PNPLA1Q8N8W4 532 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 RIN3Q8TB24 985 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 DTX3LQ8TDB6 740 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 SH3RF2Q8TEC5 729 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 MYLIPQ8WY64 445 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 KCNJ9Q92806 393 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 ALG14Q96F25 216 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 GAS2L1Q99501 681 aaPredicted RBP11.86□□□□□ -0.51
CTCFL-209ENST00000433949 NMRK1Q9NWW6 199 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 POMPQ9Y244 141 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 LEFTY2O00292 366 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 ZNF197O14709 1029 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 AIM2O14862 343 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 UBDO15205 165 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 GPC4O75487 556 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 ESR1P03372 595 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 MTHFD2P13995 350 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 GFAPP14136 432 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 FSHRP23945 695 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 CSKP41240 450 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 VIPR2P41587 438 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 KCNC1P48547 511 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 ART3Q13508 389 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 PTPRNQ16849 979 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 UNC50Q53HI1 259 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 TMEM198Q66K66 360 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 TXNDC11Q6PKC3 985 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 PAQR3Q6TCH7 311 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 GPR149Q86SP6 731 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 DSELQ8IZU8 1212 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 PTGR2Q8N8N7 351 aaPredicted RBP11.86□□□□□ -0.51
CTCFL-209ENST00000433949 BIRC8Q96P09 236 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 TTC1Q99614 292 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 MRPL40Q9NQ50 206 aaKnown RBP11.86□□□□□ -0.51
CTCFL-209ENST00000433949 DZANK1Q9NVP4 752 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 UTP6Q9NYH9 597 aaKnown RBP11.86□□□□□ -0.51
CTCFL-209ENST00000433949 FKBPLQ9UIM3 349 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 RNF112Q9ULX5 631 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 FAM50BQ9Y247 325 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 SH3BP1Q9Y3L3 701 aa11.86□□□□□ -0.51
CTCFL-209ENST00000433949 PIKFYVEQ9Y2I7 2098 aa11.85□□□□□ -0.51
CTCFL-209ENST00000433949 STX16-NPEPL1H3BU86 382 aa11.85□□□□□ -0.51
CTCFL-209ENST00000433949 STX16O14662 325 aa11.85□□□□□ -0.51
CTCFL-209ENST00000433949 MAP3K7O43318 606 aa11.85□□□□□ -0.51
CTCFL-209ENST00000433949 SOCS5O75159 536 aa11.85□□□□□ -0.51
CTCFL-209ENST00000433949 PGLSO95336 258 aa11.85□□□□□ -0.51
CTCFL-209ENST00000433949 LTBRP36941 435 aa11.85□□□□□ -0.51
CTCFL-209ENST00000433949 ABL2P42684 1182 aa11.85□□□□□ -0.51
CTCFL-209ENST00000433949 ATP4BP51164 291 aa11.85□□□□□ -0.51
CTCFL-209ENST00000433949 CACNG1Q06432 222 aa11.85□□□□□ -0.51
CTCFL-209ENST00000433949 OR4D1Q15615 310 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms