RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 DCBLD1Q8N8Z6 715 aa11.73□□□□□ -0.53
CD44-209ENST00000433892 MDGA1Q8NFP4 955 aa11.73□□□□□ -0.53
CD44-209ENST00000433892 GIPC2Q8TF65 315 aa11.73□□□□□ -0.53
CD44-209ENST00000433892 LINC01599Q8WXQ3 324 aa11.73□□□□□ -0.53
CD44-209ENST00000433892 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.73□□□□□ -0.53
CD44-209ENST00000433892 CYP2S1Q96SQ9 504 aa11.73□□□□□ -0.53
CD44-209ENST00000433892 GPR62Q9BZJ7 368 aa11.73□□□□□ -0.53
CD44-209ENST00000433892 ZFYVE28Q9HCC9 887 aa11.73□□□□□ -0.53
CD44-209ENST00000433892 AGPAT4Q9NRZ5 378 aa11.73□□□□□ -0.53
CD44-209ENST00000433892 SMOXQ9NWM0 555 aa11.73□□□□□ -0.53
CD44-209ENST00000433892 ZNF225Q9UK10 706 aa11.73□□□□□ -0.53
CD44-209ENST00000433892 PCDHA9Q9Y5H5 950 aa11.73□□□□□ -0.53
CD44-209ENST00000433892 ANKRD12Q6UB98 2062 aa11.73□□□□□ -0.53
CD44-209ENST00000433892 LAMA2P24043 3122 aaKnown RBP11.73□□□□□ -0.53
CD44-209ENST00000433892 RNF103-CHMP3A0A140T963 221 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 A0A1W2PP18 115 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 ASPDHA6ND91 283 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 TMEM189-UBE2V1I3L0A0 370 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 INPP4BO15327 924 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 OR1I1O60431 355 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 EOMESO95936 686 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 RPS17P08708 135 aaKnown RBP11.72□□□□□ -0.53
CD44-209ENST00000433892 NCK1P16333 377 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 FASP25445 335 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 CCND3P30281 292 aaPredicted RBP11.72□□□□□ -0.53
CD44-209ENST00000433892 FLT3LGP49771 235 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 UFM1P61960 85 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 GNA12Q03113 381 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 ILF2Q12905 390 aaKnown RBP11.72□□□□□ -0.53
CD44-209ENST00000433892 BNIP2Q12982 314 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 PTPRRQ15256 657 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 TMEM259Q4ZIN3 620 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 PAGE3Q5JUK9 113 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 RSPO2Q6UXX9 243 aaPredicted RBP11.72□□□□□ -0.53
CD44-209ENST00000433892 SYVN1Q86TM6 617 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 CAMK1DQ8IU85 385 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 PIANPQ8IYJ0 282 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 ADGRG5Q8IZF4 528 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 SIDT2Q8NBJ9 832 aaKnown RBP11.72□□□□□ -0.53
CD44-209ENST00000433892 TMEM125Q96AQ2 219 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 DTNBP1Q96EV8 351 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 ZNF599Q96NL3 588 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 MGME1Q9BQP7 344 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 C1orf50Q9BV19 199 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 LIN28AQ9H9Z2 209 aaKnown RBP11.72□□□□□ -0.53
CD44-209ENST00000433892 CLK4Q9HAZ1 481 aaKnown RBP11.72□□□□□ -0.53
CD44-209ENST00000433892 RRAGCQ9HB90 399 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 SLAMF8Q9P0V8 285 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 OAZ3Q9UMX2 235 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 A0A0U1RQS6 177 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 SYCE1LA8MT33 242 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 NIPSNAP2O75323 286 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 TRMUO75648 421 aaKnown RBP11.72□□□□□ -0.53
CD44-209ENST00000433892 ALDH3B2P48448 385 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 GSK3BP49841 420 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 KCNK10P57789 538 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 RPS24P62847 133 aaKnown RBP11.72□□□□□ -0.53
CD44-209ENST00000433892 RING1Q06587 406 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 DUSP4Q13115 394 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 RCAN2Q14206 197 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 MBTPS1Q14703 1052 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 RBBP7Q16576 425 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 CYP51A1Q16850 503 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 FAM26DQ5JW98 314 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 ALG1LQ6GMV1 187 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 AFTPHQ6ULP2 937 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 RNF19BQ6ZMZ0 732 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 UPF1Q92900 1129 aaKnown RBP eCLIP11.72□□□□□ -0.53
CD44-209ENST00000433892 MYRFLQ96LU7 910 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 TMEM74Q96NL1 305 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 BIRC8Q96P09 236 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 HGH1Q9BTY7 390 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 CINPQ9BW66 212 aaPredicted RBP11.72□□□□□ -0.53
CD44-209ENST00000433892 ALG2Q9H553 416 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 PIF1Q9H611 641 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 THEGQ9P2T0 379 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 ATXN10Q9UBB4 475 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 SEPT3Q9UH03 358 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 RSL24D1Q9UHA3 163 aaKnown RBP11.72□□□□□ -0.53
CD44-209ENST00000433892 RIMKLBQ9ULI2 386 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 ASB1Q9Y576 335 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 SQORQ9Y6N5 450 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 ZFP37Q9Y6Q3 630 aaPredicted RBP11.72□□□□□ -0.53
CD44-209ENST00000433892 GREB1Q4ZG55 1949 aa11.72□□□□□ -0.53
CD44-209ENST00000433892 MTMR11A4FU01 709 aa11.71□□□□□ -0.53
CD44-209ENST00000433892 SYN3O14994 580 aa11.71□□□□□ -0.53
CD44-209ENST00000433892 VPS4BO75351 444 aa11.71□□□□□ -0.53
CD44-209ENST00000433892 SEC24DO94855 1032 aaPredicted RBP11.71□□□□□ -0.53
CD44-209ENST00000433892 TMCC1O94876 653 aa11.71□□□□□ -0.53
CD44-209ENST00000433892 ESRRBO95718 433 aa11.71□□□□□ -0.53
CD44-209ENST00000433892 CKBP12277 381 aa11.71□□□□□ -0.53
CD44-209ENST00000433892 LIPEQ05469 1076 aa11.71□□□□□ -0.53
CD44-209ENST00000433892 PABPC1LQ4VXU2 614 aaKnown RBP11.71□□□□□ -0.53
CD44-209ENST00000433892 INTS11Q5TA45 600 aaKnown RBP11.71□□□□□ -0.53
CD44-209ENST00000433892 CCSAPQ6IQ19 270 aaPredicted RBP11.71□□□□□ -0.53
CD44-209ENST00000433892 OGFOD2Q6N063 350 aa11.71□□□□□ -0.53
CD44-209ENST00000433892 PSAPL1Q6NUJ1 521 aa11.71□□□□□ -0.53
CD44-209ENST00000433892 LPCAT2Q7L5N7 544 aa11.71□□□□□ -0.53
CD44-209ENST00000433892 SPATA19Q7Z5L4 167 aa11.71□□□□□ -0.53
CD44-209ENST00000433892 ZNF786Q8N393 782 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms