RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 TDRPQ86YL5 185 aa16.93■□□□□ 0.3
LINC00887-203ENST00000429578 MAML2Q8IZL2 1156 aaPredicted RBP16.93■□□□□ 0.3
LINC00887-203ENST00000429578 PELI3Q8N2H9 469 aa16.93■□□□□ 0.3
LINC00887-203ENST00000429578 NXPE1Q8N323 547 aa16.93■□□□□ 0.3
LINC00887-203ENST00000429578 PNPLA1Q8N8W4 532 aa16.93■□□□□ 0.3
LINC00887-203ENST00000429578 TP53I13Q8NBR0 393 aaPredicted RBP16.93■□□□□ 0.3
LINC00887-203ENST00000429578 DCAKDQ8WVC6 231 aa16.93■□□□□ 0.3
LINC00887-203ENST00000429578 CENPTQ96BT3 561 aa16.93■□□□□ 0.3
LINC00887-203ENST00000429578 ULK4Q96C45 1275 aa16.93■□□□□ 0.3
LINC00887-203ENST00000429578 RUFY1Q96T51 708 aa16.93■□□□□ 0.3
LINC00887-203ENST00000429578 KLF6Q99612 283 aaPredicted RBP16.93■□□□□ 0.3
LINC00887-203ENST00000429578 TTC1Q99614 292 aa16.93■□□□□ 0.3
LINC00887-203ENST00000429578 INTS10Q9NVR2 710 aaKnown RBP16.93■□□□□ 0.3
LINC00887-203ENST00000429578 ZNF180Q9UJW8 692 aa16.93■□□□□ 0.3
LINC00887-203ENST00000429578 R4GN57 208 aa16.93■□□□□ 0.3
LINC00887-203ENST00000429578 K7ESM1 405 aa16.93■□□□□ 0.3
LINC00887-203ENST00000429578 PFDN6O15212 129 aa16.93■□□□□ 0.3
LINC00887-203ENST00000429578 SLC31A1O15431 190 aa16.93■□□□□ 0.3
LINC00887-203ENST00000429578 NDUFS2O75306 463 aa16.93■□□□□ 0.3
LINC00887-203ENST00000429578 CDH16O75309 829 aa16.93■□□□□ 0.3
LINC00887-203ENST00000429578 FAM155BO75949 473 aa16.93■□□□□ 0.3
LINC00887-203ENST00000429578 AHSGP02765 367 aa16.93■□□□□ 0.3
LINC00887-203ENST00000429578 IGHV4-34P06331 123 aa16.93■□□□□ 0.3
LINC00887-203ENST00000429578 ACRV1P26436 265 aa16.93■□□□□ 0.3
LINC00887-203ENST00000429578 GABRB3P28472 473 aa16.93■□□□□ 0.3
LINC00887-203ENST00000429578 CA5AP35218 305 aa16.93■□□□□ 0.3
LINC00887-203ENST00000429578 GPR1P46091 355 aa16.93■□□□□ 0.3
LINC00887-203ENST00000429578 SLCO1A2P46721 670 aa16.93■□□□□ 0.3
LINC00887-203ENST00000429578 CSE1LP55060 971 aaKnown RBP16.93■□□□□ 0.3
LINC00887-203ENST00000429578 CEP85LQ5SZL2 805 aa16.93■□□□□ 0.3
LINC00887-203ENST00000429578 RNF187Q5TA31 235 aaPredicted RBP16.93■□□□□ 0.3
LINC00887-203ENST00000429578 GRTP1Q5TC63 336 aa16.93■□□□□ 0.3
LINC00887-203ENST00000429578 RAET1GQ6H3X3 334 aa16.93■□□□□ 0.3
LINC00887-203ENST00000429578 PNCKQ6P2M8 343 aa16.93■□□□□ 0.3
LINC00887-203ENST00000429578 ZC3H14Q6PJT7 736 aaKnown RBP16.93■□□□□ 0.3
LINC00887-203ENST00000429578 CROCCP2Q86T23 111 aa16.93■□□□□ 0.3
LINC00887-203ENST00000429578 BTN2A2Q8WVV5 523 aa16.93■□□□□ 0.3
LINC00887-203ENST00000429578 LENG8Q96PV6 779 aaPredicted RBP16.93■□□□□ 0.3
LINC00887-203ENST00000429578 RBBP8Q99708 897 aa16.93■□□□□ 0.3
LINC00887-203ENST00000429578 MCMBPQ9BTE3 642 aa16.93■□□□□ 0.3
LINC00887-203ENST00000429578 PCED1AQ9H1Q7 454 aa16.93■□□□□ 0.3
LINC00887-203ENST00000429578 FBXO6Q9NRD1 293 aaPredicted RBP16.93■□□□□ 0.3
LINC00887-203ENST00000429578 EURLQ9NYK6 297 aa16.93■□□□□ 0.3
LINC00887-203ENST00000429578 TMPRSS11EQ9UL52 423 aa16.93■□□□□ 0.3
LINC00887-203ENST00000429578 VPS9D1Q9Y2B5 631 aa16.93■□□□□ 0.3
LINC00887-203ENST00000429578 HAUS5O94927 633 aa16.92■□□□□ 0.3
LINC00887-203ENST00000429578 F7P08709 466 aaPredicted RBP16.92■□□□□ 0.3
LINC00887-203ENST00000429578 IRF4Q15306 451 aa16.92■□□□□ 0.3
LINC00887-203ENST00000429578 ZNF789Q5FWF6 425 aa16.92■□□□□ 0.3
LINC00887-203ENST00000429578 SLC36A4Q6YBV0 504 aa16.92■□□□□ 0.3
LINC00887-203ENST00000429578 RIBC1Q8N443 379 aaPredicted RBP16.92■□□□□ 0.3
LINC00887-203ENST00000429578 PLA2G15Q8NCC3 412 aa16.92■□□□□ 0.3
LINC00887-203ENST00000429578 DENND6BQ8NEG7 585 aa16.92■□□□□ 0.3
LINC00887-203ENST00000429578 GLYATL1Q969I3 302 aa16.92■□□□□ 0.3
LINC00887-203ENST00000429578 BIRC7Q96CA5 298 aa16.92■□□□□ 0.3
LINC00887-203ENST00000429578 MBNL1Q9NR56 388 aaKnown RBP16.92■□□□□ 0.3
LINC00887-203ENST00000429578 PSMC3IPQ9P2W1 217 aaPredicted RBP16.92■□□□□ 0.3
LINC00887-203ENST00000429578 MBD1Q9UIS9 605 aaPredicted RBP16.92■□□□□ 0.3
LINC00887-203ENST00000429578 FBXO4Q9UKT5 387 aa16.92■□□□□ 0.3
LINC00887-203ENST00000429578 INVSQ9Y283 1065 aa16.92■□□□□ 0.3
LINC00887-203ENST00000429578 GON4LQ3T8J9 2241 aa16.91■□□□□ 0.3
LINC00887-203ENST00000429578 TNRC6BQ9UPQ9 1833 aaKnown RBP16.91■□□□□ 0.3
LINC00887-203ENST00000429578 TLDC2A0PJX2 215 aa16.91■□□□□ 0.3
LINC00887-203ENST00000429578 SMIM23A6NLE4 172 aa16.91■□□□□ 0.3
LINC00887-203ENST00000429578 AGPSO00116 658 aa16.91■□□□□ 0.3
LINC00887-203ENST00000429578 RAD51BO15315 384 aa16.91■□□□□ 0.3
LINC00887-203ENST00000429578 NDUFS3O75489 264 aa16.91■□□□□ 0.3
LINC00887-203ENST00000429578 PCCBP05166 539 aa16.91■□□□□ 0.3
LINC00887-203ENST00000429578 TEAD1P28347 426 aa16.91■□□□□ 0.3
LINC00887-203ENST00000429578 NUDT1P36639 197 aa16.91■□□□□ 0.3
LINC00887-203ENST00000429578 FNTBP49356 437 aa16.91■□□□□ 0.3
LINC00887-203ENST00000429578 CSTF1Q05048 431 aaKnown RBP16.91■□□□□ 0.3
LINC00887-203ENST00000429578 DBN1Q16643 649 aa16.91■□□□□ 0.3
LINC00887-203ENST00000429578 KRT71Q3SY84 523 aa16.91■□□□□ 0.3
LINC00887-203ENST00000429578 WDR5BQ86VZ2 330 aa16.91■□□□□ 0.3
LINC00887-203ENST00000429578 ZC3HC1Q86WB0 502 aaKnown RBP16.91■□□□□ 0.3
LINC00887-203ENST00000429578 CADM4Q8NFZ8 388 aa16.91■□□□□ 0.3
LINC00887-203ENST00000429578 ACBD3Q9H3P7 528 aa16.91■□□□□ 0.3
LINC00887-203ENST00000429578 RHOJQ9H4E5 214 aa16.91■□□□□ 0.3
LINC00887-203ENST00000429578 ZDHHC3Q9NYG2 299 aa16.91■□□□□ 0.3
LINC00887-203ENST00000429578 CTNNAL1Q9UBT7 734 aa16.91■□□□□ 0.3
LINC00887-203ENST00000429578 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.91■□□□□ 0.3
LINC00887-203ENST00000429578 TP53BP1Q12888 1972 aaPredicted RBP16.91■□□□□ 0.3
LINC00887-203ENST00000429578 FSBPO95073 299 aa16.9■□□□□ 0.3
LINC00887-203ENST00000429578 HNRNPA2B1P22626 353 aaKnown RBP16.9■□□□□ 0.3
LINC00887-203ENST00000429578 CNTFP26441 200 aa16.9■□□□□ 0.3
LINC00887-203ENST00000429578 SPRP35270 261 aaPredicted RBP16.9■□□□□ 0.3
LINC00887-203ENST00000429578 TRIM23P36406 574 aa16.9■□□□□ 0.3
LINC00887-203ENST00000429578 PTGER3P43115 390 aa16.9■□□□□ 0.3
LINC00887-203ENST00000429578 CD151P48509 253 aa16.9■□□□□ 0.3
LINC00887-203ENST00000429578 SERPINB9P50453 376 aa16.9■□□□□ 0.3
LINC00887-203ENST00000429578 LIMK2P53671 638 aa16.9■□□□□ 0.3
LINC00887-203ENST00000429578 ADARP55265 1226 aaKnown RBP16.9■□□□□ 0.3
LINC00887-203ENST00000429578 ILF2Q12905 390 aaKnown RBP16.9■□□□□ 0.3
LINC00887-203ENST00000429578 ITIH4Q14624 930 aa16.9■□□□□ 0.3
LINC00887-203ENST00000429578 INPP5AQ14642 412 aa16.9■□□□□ 0.3
LINC00887-203ENST00000429578 LDLRAP1Q5SW96 308 aa16.9■□□□□ 0.3
LINC00887-203ENST00000429578 GPRC6AQ5T6X5 926 aa16.9■□□□□ 0.3
LINC00887-203ENST00000429578 CNSTQ6PJW8 725 aa16.9■□□□□ 0.3
LINC00887-203ENST00000429578 ADAMTSL4Q6UY14 1074 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms