RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 HHEXQ03014 270 aa15.35■□□□□ 0.05
SEC13-210ENST00000428626 AP1B1Q10567 949 aa15.35■□□□□ 0.05
SEC13-210ENST00000428626 NFATC3Q12968 1075 aa15.35■□□□□ 0.05
SEC13-210ENST00000428626 PEX6Q13608 980 aa15.35■□□□□ 0.05
SEC13-210ENST00000428626 KHDC1Q4VXA5 237 aaKnown RBP15.35■□□□□ 0.05
SEC13-210ENST00000428626 SNAP47Q5SQN1 464 aa15.35■□□□□ 0.05
SEC13-210ENST00000428626 ALS2CLQ60I27 953 aa15.35■□□□□ 0.05
SEC13-210ENST00000428626 ANKS6Q68DC2 871 aa15.35■□□□□ 0.05
SEC13-210ENST00000428626 ARHGAP22Q7Z5H3 698 aa15.35■□□□□ 0.05
SEC13-210ENST00000428626 SPATA22Q8NHS9 363 aa15.35■□□□□ 0.05
SEC13-210ENST00000428626 RNF25Q96BH1 459 aaPredicted RBP15.35■□□□□ 0.05
SEC13-210ENST00000428626 AGAP3Q96P47 875 aa15.35■□□□□ 0.05
SEC13-210ENST00000428626 SLC12A9Q9BXP2 914 aa15.35■□□□□ 0.05
SEC13-210ENST00000428626 SPRY4Q9C004 299 aa15.35■□□□□ 0.05
SEC13-210ENST00000428626 OR2AG1Q9H205 316 aa15.35■□□□□ 0.05
SEC13-210ENST00000428626 SARS2Q9NP81 518 aaKnown RBP15.35■□□□□ 0.05
SEC13-210ENST00000428626 PRDM8Q9NQV8 689 aa15.35■□□□□ 0.05
SEC13-210ENST00000428626 SLC23A2Q9UGH3 650 aa15.35■□□□□ 0.05
SEC13-210ENST00000428626 TMPRSS11EQ9UL52 423 aa15.35■□□□□ 0.05
SEC13-210ENST00000428626 PCDHB11Q9Y5F2 797 aa15.35■□□□□ 0.05
SEC13-210ENST00000428626 SPO11Q9Y5K1 396 aa15.35■□□□□ 0.05
SEC13-210ENST00000428626 RGSL1A5PLK6 1076 aa15.34■□□□□ 0.05
SEC13-210ENST00000428626 APOL1O14791 398 aa15.34■□□□□ 0.05
SEC13-210ENST00000428626 AURKAO14965 403 aa15.34■□□□□ 0.05
SEC13-210ENST00000428626 ZW10O43264 779 aa15.34■□□□□ 0.05
SEC13-210ENST00000428626 GRID2O43424 1007 aa15.34■□□□□ 0.05
SEC13-210ENST00000428626 MT-CYBP00156 380 aaPredicted RBP15.34■□□□□ 0.05
SEC13-210ENST00000428626 ITGB2P05107 769 aa15.34■□□□□ 0.05
SEC13-210ENST00000428626 F3P13726 295 aa15.34■□□□□ 0.05
SEC13-210ENST00000428626 CSTF2P33240 577 aaKnown RBP eCLIP15.34■□□□□ 0.05
SEC13-210ENST00000428626 CLCA4Q14CN2 919 aa15.34■□□□□ 0.05
SEC13-210ENST00000428626 PCSK7Q16549 785 aa15.34■□□□□ 0.05
SEC13-210ENST00000428626 TMEM164Q5U3C3 297 aa15.34■□□□□ 0.05
SEC13-210ENST00000428626 TMC3Q7Z5M5 1100 aa15.34■□□□□ 0.05
SEC13-210ENST00000428626 ADGRG6Q86SQ4 1221 aa15.34■□□□□ 0.05
SEC13-210ENST00000428626 FAM129CQ86XR2 697 aa15.34■□□□□ 0.05
SEC13-210ENST00000428626 VSTM4Q8IW00 320 aa15.34■□□□□ 0.05
SEC13-210ENST00000428626 CCHCR1Q8TD31 782 aa15.34■□□□□ 0.05
SEC13-210ENST00000428626 ZNF830Q96NB3 372 aaPredicted RBP15.34■□□□□ 0.05
SEC13-210ENST00000428626 CTRCQ99895 268 aa15.34■□□□□ 0.05
SEC13-210ENST00000428626 DDA1Q9BW61 102 aa15.34■□□□□ 0.05
SEC13-210ENST00000428626 SPATA16Q9BXB7 569 aa15.34■□□□□ 0.05
SEC13-210ENST00000428626 TBC1D10AQ9BXI6 508 aa15.34■□□□□ 0.05
SEC13-210ENST00000428626 CARD9Q9H257 536 aa15.34■□□□□ 0.05
SEC13-210ENST00000428626 ZFYVE1Q9HBF4 777 aa15.34■□□□□ 0.05
SEC13-210ENST00000428626 APMAPQ9HDC9 416 aa15.34■□□□□ 0.05
SEC13-210ENST00000428626 ABHD10Q9NUJ1 306 aa15.34■□□□□ 0.05
SEC13-210ENST00000428626 SLC39A1Q9NY26 324 aa15.34■□□□□ 0.05
SEC13-210ENST00000428626 SAE1Q9UBE0 346 aaPredicted RBP15.34■□□□□ 0.05
SEC13-210ENST00000428626 ZNF711Q9Y462 761 aa15.34■□□□□ 0.05
SEC13-210ENST00000428626 PRR19A6NJB7 356 aa15.33■□□□□ 0.04
SEC13-210ENST00000428626 B4E171 279 aa15.33■□□□□ 0.04
SEC13-210ENST00000428626 DUX1O43812 170 aa15.33■□□□□ 0.04
SEC13-210ENST00000428626 SLC28A2O43868 658 aa15.33■□□□□ 0.04
SEC13-210ENST00000428626 AKR1B10O60218 316 aa15.33■□□□□ 0.04
SEC13-210ENST00000428626 MFAP3LO75121 409 aa15.33■□□□□ 0.04
SEC13-210ENST00000428626 MTX2O75431 263 aa15.33■□□□□ 0.04
SEC13-210ENST00000428626 SLC4A1P02730 911 aa15.33■□□□□ 0.04
SEC13-210ENST00000428626 KRT1P04264 644 aa15.33■□□□□ 0.04
SEC13-210ENST00000428626 LIFP15018 202 aa15.33■□□□□ 0.04
SEC13-210ENST00000428626 CD68P34810 354 aaPredicted RBP15.33■□□□□ 0.04
SEC13-210ENST00000428626 TSPAN7P41732 249 aa15.33■□□□□ 0.04
SEC13-210ENST00000428626 DYNLT1P63172 113 aa15.33■□□□□ 0.04
SEC13-210ENST00000428626 UBE2IP63279 158 aaKnown RBP15.33■□□□□ 0.04
SEC13-210ENST00000428626 ADCY2Q08462 1091 aa15.33■□□□□ 0.04
SEC13-210ENST00000428626 NOMO1Q15155 1222 aa15.33■□□□□ 0.04
SEC13-210ENST00000428626 LLGL1Q15334 1064 aa15.33■□□□□ 0.04
SEC13-210ENST00000428626 WDR74Q6RFH5 385 aaPredicted RBP15.33■□□□□ 0.04
SEC13-210ENST00000428626 CRTC3Q6UUV7 619 aa15.33■□□□□ 0.04
SEC13-210ENST00000428626 MFSD7Q6UXD7 560 aa15.33■□□□□ 0.04
SEC13-210ENST00000428626 NT5DC3Q86UY8 548 aa15.33■□□□□ 0.04
SEC13-210ENST00000428626 VSIG1Q86XK7 387 aa15.33■□□□□ 0.04
SEC13-210ENST00000428626 OR10G6Q8NH81 332 aa15.33■□□□□ 0.04
SEC13-210ENST00000428626 NCSTNQ92542 709 aa15.33■□□□□ 0.04
SEC13-210ENST00000428626 RTP4Q96DX8 246 aa15.33■□□□□ 0.04
SEC13-210ENST00000428626 AHCYL2Q96HN2 611 aaKnown RBP15.33■□□□□ 0.04
SEC13-210ENST00000428626 PLEKHG4BQ96PX9 1271 aa15.33■□□□□ 0.04
SEC13-210ENST00000428626 DPYSL5Q9BPU6 564 aa15.33■□□□□ 0.04
SEC13-210ENST00000428626 ADGRE3Q9BY15 652 aa15.33■□□□□ 0.04
SEC13-210ENST00000428626 SLC25A51Q9H1U9 297 aa15.33■□□□□ 0.04
SEC13-210ENST00000428626 DEF6Q9H4E7 631 aa15.33■□□□□ 0.04
SEC13-210ENST00000428626 RMI1Q9H9A7 625 aa15.33■□□□□ 0.04
SEC13-210ENST00000428626 NHEJ1Q9H9Q4 299 aaPredicted RBP15.33■□□□□ 0.04
SEC13-210ENST00000428626 MAGEE1Q9HCI5 957 aa15.33■□□□□ 0.04
SEC13-210ENST00000428626 KLC4Q9NSK0 619 aa15.33■□□□□ 0.04
SEC13-210ENST00000428626 STARD5Q9NSY2 213 aa15.33■□□□□ 0.04
SEC13-210ENST00000428626 HAUS2Q9NVX0 235 aa15.33■□□□□ 0.04
SEC13-210ENST00000428626 UBP1Q9NZI7 540 aa15.33■□□□□ 0.04
SEC13-210ENST00000428626 OGFRQ9NZT2 677 aa15.33■□□□□ 0.04
SEC13-210ENST00000428626 LCMT1Q9UIC8 334 aa15.33■□□□□ 0.04
SEC13-210ENST00000428626 PILRAQ9UKJ1 303 aa15.33■□□□□ 0.04
SEC13-210ENST00000428626 CHUKO15111 745 aa15.32■□□□□ 0.04
SEC13-210ENST00000428626 RAD1O60671 282 aa15.32■□□□□ 0.04
SEC13-210ENST00000428626 TNNT1P13805 278 aa15.32■□□□□ 0.04
SEC13-210ENST00000428626 PECAM1P16284 738 aaPredicted RBP15.32■□□□□ 0.04
SEC13-210ENST00000428626 BPIP17213 487 aa15.32■□□□□ 0.04
SEC13-210ENST00000428626 PTPN3P26045 913 aa15.32■□□□□ 0.04
SEC13-210ENST00000428626 CA5AP35218 305 aa15.32■□□□□ 0.04
SEC13-210ENST00000428626 ARHGAP25P42331 645 aa15.32■□□□□ 0.04
SEC13-210ENST00000428626 MAPK9P45984 424 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms