RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 PLA2G4EQ3MJ16 856 aa16.36■□□□□ 0.21
VARS-216ENST00000428445 ANKRD20A8PQ5CZ79 823 aa16.36■□□□□ 0.21
VARS-216ENST00000428445 FIGNQ5HY92 759 aa16.36■□□□□ 0.21
VARS-216ENST00000428445 HENMT1Q5T8I9 393 aaKnown RBP16.36■□□□□ 0.21
VARS-216ENST00000428445 ALS2CLQ60I27 953 aa16.36■□□□□ 0.21
VARS-216ENST00000428445 CEACAM20Q6UY09 585 aa16.36■□□□□ 0.21
VARS-216ENST00000428445 LYSMD3Q7Z3D4 306 aa16.36■□□□□ 0.21
VARS-216ENST00000428445 SLC9B2Q86UD5 537 aa16.36■□□□□ 0.21
VARS-216ENST00000428445 RAVER1Q8IY67 606 aaKnown RBP16.36■□□□□ 0.21
VARS-216ENST00000428445 NIPA2Q8N8Q9 360 aa16.36■□□□□ 0.21
VARS-216ENST00000428445 FAM71BQ8TC56 605 aa16.36■□□□□ 0.21
VARS-216ENST00000428445 CPLX3Q8WVH0 158 aa16.36■□□□□ 0.21
VARS-216ENST00000428445 ABHD17AQ96GS6 310 aa16.36■□□□□ 0.21
VARS-216ENST00000428445 ELMO2Q96JJ3 720 aa16.36■□□□□ 0.21
VARS-216ENST00000428445 FAM83DQ9H4H8 585 aa16.36■□□□□ 0.21
VARS-216ENST00000428445 FBXO8Q9NRD0 319 aa16.36■□□□□ 0.21
VARS-216ENST00000428445 OGFRQ9NZT2 677 aa16.36■□□□□ 0.21
VARS-216ENST00000428445 CPNE7Q9UBL6 633 aa16.36■□□□□ 0.21
VARS-216ENST00000428445 SLC23A2Q9UGH3 650 aa16.36■□□□□ 0.21
VARS-216ENST00000428445 SLC30A1Q9Y6M5 507 aa16.36■□□□□ 0.21
VARS-216ENST00000428445 A0A087X0T9 212 aa16.35■□□□□ 0.21
VARS-216ENST00000428445 POLR1CO15160 346 aaPredicted RBP16.35■□□□□ 0.21
VARS-216ENST00000428445 GRID2O43424 1007 aa16.35■□□□□ 0.21
VARS-216ENST00000428445 JCHAINP01591 159 aa16.35■□□□□ 0.21
VARS-216ENST00000428445 CYP1A2P05177 515 aa16.35■□□□□ 0.21
VARS-216ENST00000428445 FURINP09958 794 aa16.35■□□□□ 0.21
VARS-216ENST00000428445 FAM228BP0C875 321 aa16.35■□□□□ 0.21
VARS-216ENST00000428445 F3P13726 295 aa16.35■□□□□ 0.21
VARS-216ENST00000428445 CES1P23141 567 aa16.35■□□□□ 0.21
VARS-216ENST00000428445 CCNCP24863 283 aa16.35■□□□□ 0.21
VARS-216ENST00000428445 CD86P42081 329 aa16.35■□□□□ 0.21
VARS-216ENST00000428445 SEPHS1P49903 392 aa16.35■□□□□ 0.21
VARS-216ENST00000428445 SH3BP2P78314 561 aa16.35■□□□□ 0.21
VARS-216ENST00000428445 FOXM1Q08050 763 aa16.35■□□□□ 0.21
VARS-216ENST00000428445 IFI16Q16666 785 aaKnown RBP16.35■□□□□ 0.21
VARS-216ENST00000428445 ALG1LQ6GMV1 187 aa16.35■□□□□ 0.21
VARS-216ENST00000428445 CRTC3Q6UUV7 619 aa16.35■□□□□ 0.21
VARS-216ENST00000428445 B4GALNT4Q76KP1 1039 aa16.35■□□□□ 0.21
VARS-216ENST00000428445 PQLC3Q8N755 202 aa16.35■□□□□ 0.21
VARS-216ENST00000428445 KCTD6Q8NC69 237 aa16.35■□□□□ 0.21
VARS-216ENST00000428445 C9orf43Q8TAL5 461 aaPredicted RBP16.35■□□□□ 0.21
VARS-216ENST00000428445 STARD8Q92502 1023 aa16.35■□□□□ 0.21
VARS-216ENST00000428445 KIAA1143Q96AT1 154 aaPredicted RBP16.35■□□□□ 0.21
VARS-216ENST00000428445 PLEKHG4BQ96PX9 1271 aa16.35■□□□□ 0.21
VARS-216ENST00000428445 TEFMQ96QE5 360 aaKnown RBP16.35■□□□□ 0.21
VARS-216ENST00000428445 CEP41Q9BYV8 373 aa16.35■□□□□ 0.21
VARS-216ENST00000428445 OR2AG1Q9H205 316 aa16.35■□□□□ 0.21
VARS-216ENST00000428445 OSGEPL1Q9H4B0 414 aa16.35■□□□□ 0.21
VARS-216ENST00000428445 KLC4Q9NSK0 619 aa16.35■□□□□ 0.21
VARS-216ENST00000428445 VPS18Q9P253 973 aa16.35■□□□□ 0.21
VARS-216ENST00000428445 TMEM184BQ9Y519 407 aaPredicted RBP16.35■□□□□ 0.21
VARS-216ENST00000428445 ANKRD66B4E2M5 251 aa16.34■□□□□ 0.21
VARS-216ENST00000428445 MYO1FO00160 1098 aa16.34■□□□□ 0.21
VARS-216ENST00000428445 KCNK1O00180 336 aa16.34■□□□□ 0.21
VARS-216ENST00000428445 NUAK1O60285 661 aa16.34■□□□□ 0.21
VARS-216ENST00000428445 MTX2O75431 263 aa16.34■□□□□ 0.21
VARS-216ENST00000428445 DLGAP3O95886 979 aa16.34■□□□□ 0.21
VARS-216ENST00000428445 SLC4A1P02730 911 aa16.34■□□□□ 0.21
VARS-216ENST00000428445 PYGLP06737 847 aa16.34■□□□□ 0.21
VARS-216ENST00000428445 CASRP41180 1078 aa16.34■□□□□ 0.21
VARS-216ENST00000428445 LEPRP48357 1165 aaKnown RBP16.34■□□□□ 0.21
VARS-216ENST00000428445 FOXK1P85037 733 aa16.34■□□□□ 0.21
VARS-216ENST00000428445 ABHD18Q0P651 414 aa16.34■□□□□ 0.21
VARS-216ENST00000428445 UBAP2LQ14157 1087 aaKnown RBP16.34■□□□□ 0.21
VARS-216ENST00000428445 SEPT7Q16181 437 aaKnown RBP16.34■□□□□ 0.21
VARS-216ENST00000428445 TIGD7Q6NT04 549 aaPredicted RBP16.34■□□□□ 0.21
VARS-216ENST00000428445 TMEM135Q86UB9 458 aa16.34■□□□□ 0.21
VARS-216ENST00000428445 CCNYQ8ND76 341 aa16.34■□□□□ 0.21
VARS-216ENST00000428445 GPR26Q8NDV2 337 aa16.34■□□□□ 0.21
VARS-216ENST00000428445 SYN2Q92777 582 aaPredicted RBP16.34■□□□□ 0.21
VARS-216ENST00000428445 CATSPER2Q96P56 530 aa16.34■□□□□ 0.21
VARS-216ENST00000428445 TGM7Q96PF1 710 aa16.34■□□□□ 0.21
VARS-216ENST00000428445 LYSMD1Q96S90 227 aa16.34■□□□□ 0.21
VARS-216ENST00000428445 MLPHQ9BV36 600 aaPredicted RBP16.34■□□□□ 0.21
VARS-216ENST00000428445 PKD2L2Q9NZM6 624 aa16.34■□□□□ 0.21
VARS-216ENST00000428445 RCOR3Q9P2K3 495 aaPredicted RBP16.34■□□□□ 0.21
VARS-216ENST00000428445 ANKMY1Q9P2S6 941 aa16.34■□□□□ 0.21
VARS-216ENST00000428445 SHOC2Q9UQ13 582 aa16.34■□□□□ 0.21
VARS-216ENST00000428445 PLAAQ9Y263 795 aa16.34■□□□□ 0.21
VARS-216ENST00000428445 DNAJC16Q9Y2G8 782 aa16.34■□□□□ 0.21
VARS-216ENST00000428445 ZNF106Q9H2Y7 1883 aaKnown RBP16.33■□□□□ 0.21
VARS-216ENST00000428445 KIF1CO43896 1103 aaKnown RBP16.33■□□□□ 0.2
VARS-216ENST00000428445 SERPINC1P01008 464 aa16.33■□□□□ 0.2
VARS-216ENST00000428445 TCN2P20062 427 aa16.33■□□□□ 0.2
VARS-216ENST00000428445 SLC19A1P41440 591 aa16.33■□□□□ 0.2
VARS-216ENST00000428445 UBE2IP63279 158 aaKnown RBP16.33■□□□□ 0.2
VARS-216ENST00000428445 ZBTB17Q13105 803 aa16.33■□□□□ 0.2
VARS-216ENST00000428445 ADGRG6Q86SQ4 1221 aa16.33■□□□□ 0.2
VARS-216ENST00000428445 CNTD1Q8N815 330 aa16.33■□□□□ 0.2
VARS-216ENST00000428445 GALNT6Q8NCL4 622 aa16.33■□□□□ 0.2
VARS-216ENST00000428445 SH3KBP1Q96B97 665 aa16.33■□□□□ 0.2
VARS-216ENST00000428445 IQCDQ96DY2 449 aa16.33■□□□□ 0.2
VARS-216ENST00000428445 TSGA13Q96PP4 275 aa16.33■□□□□ 0.2
VARS-216ENST00000428445 HERPUD2Q9BSE4 406 aa16.33■□□□□ 0.2
VARS-216ENST00000428445 SPATA16Q9BXB7 569 aa16.33■□□□□ 0.2
VARS-216ENST00000428445 STN1Q9H668 368 aaKnown RBP16.33■□□□□ 0.2
VARS-216ENST00000428445 HAUS2Q9NVX0 235 aa16.33■□□□□ 0.2
VARS-216ENST00000428445 SIDT1Q9NXL6 827 aaKnown RBP16.33■□□□□ 0.2
VARS-216ENST00000428445 ZNF624Q9P2J8 865 aaPredicted RBP16.33■□□□□ 0.2
VARS-216ENST00000428445 TRIM10Q9UDY6 481 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms