RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 CACNA1BQ00975 2339 aa13.49□□□□□ -0.25
SNX3-204ENST00000426155 GAPDHSO14556 408 aaPredicted RBP13.49□□□□□ -0.25
SNX3-204ENST00000426155 LIASO43766 372 aa13.49□□□□□ -0.25
SNX3-204ENST00000426155 CSO75390 466 aaKnown RBP13.49□□□□□ -0.25
SNX3-204ENST00000426155 ACP5P13686 325 aa13.49□□□□□ -0.25
SNX3-204ENST00000426155 ZNF8P17098 575 aaPredicted RBP13.49□□□□□ -0.25
SNX3-204ENST00000426155 CXCR5P32302 372 aa13.49□□□□□ -0.25
SNX3-204ENST00000426155 PDX1P52945 283 aa13.49□□□□□ -0.25
SNX3-204ENST00000426155 CYP4F3Q08477 520 aa13.49□□□□□ -0.25
SNX3-204ENST00000426155 SNX1Q13596 522 aa13.49□□□□□ -0.25
SNX3-204ENST00000426155 HLTFQ14527 1009 aaKnown RBP eCLIP13.49□□□□□ -0.25
SNX3-204ENST00000426155 PRPSAP1Q14558 356 aa13.49□□□□□ -0.25
SNX3-204ENST00000426155 SIX1Q15475 284 aaPredicted RBP13.49□□□□□ -0.25
SNX3-204ENST00000426155 OASLQ15646 514 aaKnown RBP13.49□□□□□ -0.25
SNX3-204ENST00000426155 C14orf28Q4W4Y0 310 aa13.49□□□□□ -0.25
SNX3-204ENST00000426155 CERCAMQ5T4B2 595 aa13.49□□□□□ -0.25
SNX3-204ENST00000426155 DENND5AQ6IQ26 1287 aa13.49□□□□□ -0.25
SNX3-204ENST00000426155 OGFOD3Q6PK18 319 aa13.49□□□□□ -0.25
SNX3-204ENST00000426155 CRTC3Q6UUV7 619 aa13.49□□□□□ -0.25
SNX3-204ENST00000426155 FAM151BQ6UXP7 276 aa13.49□□□□□ -0.25
SNX3-204ENST00000426155 RANBP10Q6VN20 620 aa13.49□□□□□ -0.25
SNX3-204ENST00000426155 ADGRG6Q86SQ4 1221 aa13.49□□□□□ -0.25
SNX3-204ENST00000426155 Q8N9G6 341 aaPredicted RBP13.49□□□□□ -0.25
SNX3-204ENST00000426155 GLIS1Q8NBF1 620 aa13.49□□□□□ -0.25
SNX3-204ENST00000426155 ZDHHC1Q8WTX9 485 aa13.49□□□□□ -0.25
SNX3-204ENST00000426155 NAT6Q93015 286 aa13.49□□□□□ -0.25
SNX3-204ENST00000426155 GLYATL1Q969I3 302 aa13.49□□□□□ -0.25
SNX3-204ENST00000426155 PLEKHG4BQ96PX9 1271 aa13.49□□□□□ -0.25
SNX3-204ENST00000426155 TBL1YQ9BQ87 522 aa13.49□□□□□ -0.25
SNX3-204ENST00000426155 CARD9Q9H257 536 aa13.49□□□□□ -0.25
SNX3-204ENST00000426155 TRABDQ9H4I3 376 aa13.49□□□□□ -0.25
SNX3-204ENST00000426155 CCDC86Q9H6F5 360 aaKnown RBP13.49□□□□□ -0.25
SNX3-204ENST00000426155 IL26Q9NPH9 171 aa13.49□□□□□ -0.25
SNX3-204ENST00000426155 VPS18Q9P253 973 aa13.49□□□□□ -0.25
SNX3-204ENST00000426155 ZNHIT2Q9UHR6 403 aa13.49□□□□□ -0.25
SNX3-204ENST00000426155 KCNK6Q9Y257 313 aa13.49□□□□□ -0.25
SNX3-204ENST00000426155 AAR2Q9Y312 384 aaKnown RBP13.49□□□□□ -0.25
SNX3-204ENST00000426155 UNC13CQ8NB66 2214 aa13.49□□□□□ -0.25
SNX3-204ENST00000426155 A0A1W2PQM1 296 aa13.48□□□□□ -0.25
SNX3-204ENST00000426155 PMS2P1A4D2B8 440 aa13.48□□□□□ -0.25
SNX3-204ENST00000426155 CCL22O00626 93 aa13.48□□□□□ -0.25
SNX3-204ENST00000426155 NRDCO43847 1150 aa13.48□□□□□ -0.25
SNX3-204ENST00000426155 UGT1A9O60656 530 aa13.48□□□□□ -0.25
SNX3-204ENST00000426155 SLC25A14O95258 325 aaPredicted RBP13.48□□□□□ -0.25
SNX3-204ENST00000426155 ECEL1O95672 775 aa13.48□□□□□ -0.25
SNX3-204ENST00000426155 RPLP0P05388 317 aaKnown RBP13.48□□□□□ -0.25
SNX3-204ENST00000426155 ETS1P14921 441 aa13.48□□□□□ -0.25
SNX3-204ENST00000426155 UGT1A6P19224 532 aa13.48□□□□□ -0.25
SNX3-204ENST00000426155 UGT1A1P22309 533 aa13.48□□□□□ -0.25
SNX3-204ENST00000426155 UGT1A4P22310 534 aa13.48□□□□□ -0.25
SNX3-204ENST00000426155 UGT1A3P35503 534 aa13.48□□□□□ -0.25
SNX3-204ENST00000426155 UGT1A5P35504 534 aa13.48□□□□□ -0.25
SNX3-204ENST00000426155 SPAM1P38567 509 aa13.48□□□□□ -0.25
SNX3-204ENST00000426155 CCL7P80098 99 aa13.48□□□□□ -0.25
SNX3-204ENST00000426155 MSLNQ13421 630 aaPredicted RBP13.48□□□□□ -0.25
SNX3-204ENST00000426155 CHRNA6Q15825 494 aa13.48□□□□□ -0.25
SNX3-204ENST00000426155 KCTD11Q693B1 232 aa13.48□□□□□ -0.25
SNX3-204ENST00000426155 PHYKPLQ8IUZ5 450 aa13.48□□□□□ -0.25
SNX3-204ENST00000426155 KLHDC8BQ8IXV7 354 aa13.48□□□□□ -0.25
SNX3-204ENST00000426155 NAGSQ8N159 534 aa13.48□□□□□ -0.25
SNX3-204ENST00000426155 TRIM58Q8NG06 486 aa13.48□□□□□ -0.25
SNX3-204ENST00000426155 OR13C4Q8NGS5 318 aa13.48□□□□□ -0.25
SNX3-204ENST00000426155 NAT14Q8WUY8 206 aa13.48□□□□□ -0.25
SNX3-204ENST00000426155 SRPK1Q96SB4 655 aaKnown RBP13.48□□□□□ -0.25
SNX3-204ENST00000426155 UGT1A7Q9HAW7 530 aa13.48□□□□□ -0.25
SNX3-204ENST00000426155 UGT1A10Q9HAW8 530 aa13.48□□□□□ -0.25
SNX3-204ENST00000426155 UGT1A8Q9HAW9 530 aa13.48□□□□□ -0.25
SNX3-204ENST00000426155 RAD18Q9NS91 495 aa13.48□□□□□ -0.25
SNX3-204ENST00000426155 HACD3Q9P035 362 aa13.48□□□□□ -0.25
SNX3-204ENST00000426155 PKD1L2Q7Z442 2459 aa13.48□□□□□ -0.25
SNX3-204ENST00000426155 TRBV23OR9-2A0A075B6M9 112 aa13.47□□□□□ -0.25
SNX3-204ENST00000426155 GLYATL1P3A0A0U1RQE8 302 aa13.47□□□□□ -0.25
SNX3-204ENST00000426155 A0A1W2PNU3 283 aaPredicted RBP13.47□□□□□ -0.25
SNX3-204ENST00000426155 TMEM8BA6NDV4 472 aa13.47□□□□□ -0.25
SNX3-204ENST00000426155 GRID2O43424 1007 aa13.47□□□□□ -0.25
SNX3-204ENST00000426155 NUAK1O60285 661 aa13.47□□□□□ -0.25
SNX3-204ENST00000426155 IFNB1P01574 187 aa13.47□□□□□ -0.25
SNX3-204ENST00000426155 TMPRSS15P98073 1019 aa13.47□□□□□ -0.25
SNX3-204ENST00000426155 PARP6Q2NL67 630 aa13.47□□□□□ -0.25
SNX3-204ENST00000426155 PDPK2PQ6A1A2 396 aa13.47□□□□□ -0.25
SNX3-204ENST00000426155 B3GNT8Q7Z7M8 397 aa13.47□□□□□ -0.25
SNX3-204ENST00000426155 C17orf82Q86X59 251 aaPredicted RBP13.47□□□□□ -0.25
SNX3-204ENST00000426155 PROSER1Q86XN7 944 aa13.47□□□□□ -0.25
SNX3-204ENST00000426155 CCNJLQ8IV13 435 aa13.47□□□□□ -0.25
SNX3-204ENST00000426155 ARL14Q8N4G2 192 aa13.47□□□□□ -0.25
SNX3-204ENST00000426155 OR4K2Q8NGD2 314 aa13.47□□□□□ -0.25
SNX3-204ENST00000426155 NXPE2Q96DL1 559 aa13.47□□□□□ -0.25
SNX3-204ENST00000426155 RTP4Q96DX8 246 aa13.47□□□□□ -0.25
SNX3-204ENST00000426155 ATXN7L3BQ96GX2 97 aa13.47□□□□□ -0.25
SNX3-204ENST00000426155 DEPDC7Q96QD5 511 aa13.47□□□□□ -0.25
SNX3-204ENST00000426155 LRIT1Q9P2V4 623 aa13.47□□□□□ -0.25
SNX3-204ENST00000426155 SLC23A2Q9UGH3 650 aa13.47□□□□□ -0.25
SNX3-204ENST00000426155 FKBPLQ9UIM3 349 aa13.47□□□□□ -0.25
SNX3-204ENST00000426155 ATXN7L1Q9ULK2 861 aaPredicted RBP13.47□□□□□ -0.25
SNX3-204ENST00000426155 ACACAQ13085 2346 aa13.47□□□□□ -0.25
SNX3-204ENST00000426155 SRRM3A6NNA2 597 aaPredicted RBP13.46□□□□□ -0.25
SNX3-204ENST00000426155 AGRPO00253 132 aa13.46□□□□□ -0.25
SNX3-204ENST00000426155 NTN3O00634 580 aaPredicted RBP13.46□□□□□ -0.25
SNX3-204ENST00000426155 STX7O15400 261 aaKnown RBP13.46□□□□□ -0.25
SNX3-204ENST00000426155 FGGP02679 453 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms