RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 TSGA13Q96PP4 275 aa12.88□□□□□ -0.35
VRK3-203ENST00000424804 SLC12A9Q9BXP2 914 aa12.88□□□□□ -0.35
VRK3-203ENST00000424804 STARD5Q9NSY2 213 aa12.88□□□□□ -0.35
VRK3-203ENST00000424804 PCDHGA3Q9Y5H0 932 aa12.88□□□□□ -0.35
VRK3-203ENST00000424804 OAS3Q9Y6K5 1087 aaKnown RBP12.88□□□□□ -0.35
VRK3-203ENST00000424804 UBR5O95071 2799 aaPredicted RBP12.88□□□□□ -0.35
VRK3-203ENST00000424804 HECTD1Q9ULT8 2610 aa12.87□□□□□ -0.35
VRK3-203ENST00000424804 hCG_1818297A0A087WSY0 165 aa12.87□□□□□ -0.35
VRK3-203ENST00000424804 GOLGA6CA6NDK9 693 aa12.87□□□□□ -0.35
VRK3-203ENST00000424804 GOLGA6BA6NDN3 693 aa12.87□□□□□ -0.35
VRK3-203ENST00000424804 RHPN2P1A8MT19 583 aa12.87□□□□□ -0.35
VRK3-203ENST00000424804 ZNF487B1APH4 448 aa12.87□□□□□ -0.35
VRK3-203ENST00000424804 HGSO14964 777 aaPredicted RBP12.87□□□□□ -0.35
VRK3-203ENST00000424804 PJA2O43164 708 aa12.87□□□□□ -0.35
VRK3-203ENST00000424804 ITGB2P05107 769 aa12.87□□□□□ -0.35
VRK3-203ENST00000424804 MMP2P08253 660 aa12.87□□□□□ -0.35
VRK3-203ENST00000424804 GOLGA6DP0CG33 693 aa12.87□□□□□ -0.35
VRK3-203ENST00000424804 THRAP10827 490 aa12.87□□□□□ -0.35
VRK3-203ENST00000424804 PECAM1P16284 738 aaPredicted RBP12.87□□□□□ -0.35
VRK3-203ENST00000424804 NFKBIAP25963 317 aa12.87□□□□□ -0.35
VRK3-203ENST00000424804 CD86P42081 329 aa12.87□□□□□ -0.35
VRK3-203ENST00000424804 PPIDQ08752 370 aaKnown RBP12.87□□□□□ -0.35
VRK3-203ENST00000424804 XKR5Q6UX68 686 aa12.87□□□□□ -0.35
VRK3-203ENST00000424804 PEX26Q7Z412 305 aa12.87□□□□□ -0.35
VRK3-203ENST00000424804 KDELC2Q7Z4H8 507 aa12.87□□□□□ -0.35
VRK3-203ENST00000424804 VSIG1Q86XK7 387 aa12.87□□□□□ -0.35
VRK3-203ENST00000424804 NDUFAF2Q8N183 169 aa12.87□□□□□ -0.35
VRK3-203ENST00000424804 BMPERQ8N8U9 685 aa12.87□□□□□ -0.35
VRK3-203ENST00000424804 OR4D9Q8NGE8 314 aa12.87□□□□□ -0.35
VRK3-203ENST00000424804 EXD1Q8NHP7 514 aa12.87□□□□□ -0.35
VRK3-203ENST00000424804 P3H4Q92791 437 aa12.87□□□□□ -0.35
VRK3-203ENST00000424804 NKD1Q969G9 470 aa12.87□□□□□ -0.35
VRK3-203ENST00000424804 EID2BQ96D98 161 aa12.87□□□□□ -0.35
VRK3-203ENST00000424804 AGAP3Q96P47 875 aa12.87□□□□□ -0.35
VRK3-203ENST00000424804 LYSMD1Q96S90 227 aa12.87□□□□□ -0.35
VRK3-203ENST00000424804 TDRD1Q9BXT4 1180 aaKnown RBP12.87□□□□□ -0.35
VRK3-203ENST00000424804 OCIAD1Q9NX40 245 aa12.87□□□□□ -0.35
VRK3-203ENST00000424804 GOLGA6AQ9NYA3 693 aa12.87□□□□□ -0.35
VRK3-203ENST00000424804 AMFRQ9UKV5 643 aa12.87□□□□□ -0.35
VRK3-203ENST00000424804 PACSIN2Q9UNF0 486 aaPredicted RBP12.87□□□□□ -0.35
VRK3-203ENST00000424804 CHKBQ9Y259 395 aa12.87□□□□□ -0.35
VRK3-203ENST00000424804 SPENQ96T58 3664 aaKnown RBP12.86□□□□□ -0.35
VRK3-203ENST00000424804 TRBV23OR9-2A0A075B6M9 112 aa12.86□□□□□ -0.35
VRK3-203ENST00000424804 GRID2IPA4D2P6 1211 aa12.86□□□□□ -0.35
VRK3-203ENST00000424804 A6NCN8 305 aa12.86□□□□□ -0.35
VRK3-203ENST00000424804 BTNL10A8MVZ5 291 aa12.86□□□□□ -0.35
VRK3-203ENST00000424804 F5H423 210 aaPredicted RBP12.86□□□□□ -0.35
VRK3-203ENST00000424804 CLDN7O95471 211 aa12.86□□□□□ -0.35
VRK3-203ENST00000424804 FTCDO95954 541 aa12.86□□□□□ -0.35
VRK3-203ENST00000424804 CA4P22748 312 aa12.86□□□□□ -0.35
VRK3-203ENST00000424804 MPSTP25325 297 aa12.86□□□□□ -0.35
VRK3-203ENST00000424804 CTNNA2P26232 953 aa12.86□□□□□ -0.35
VRK3-203ENST00000424804 CD82P27701 267 aa12.86□□□□□ -0.35
VRK3-203ENST00000424804 CTNNA1P35221 906 aaKnown RBP12.86□□□□□ -0.35
VRK3-203ENST00000424804 CETN2P41208 172 aa12.86□□□□□ -0.35
VRK3-203ENST00000424804 ACTR1BP42025 376 aa12.86□□□□□ -0.35
VRK3-203ENST00000424804 GPR1P46091 355 aa12.86□□□□□ -0.35
VRK3-203ENST00000424804 FASLGP48023 281 aa12.86□□□□□ -0.35
VRK3-203ENST00000424804 ACTR1AP61163 376 aa12.86□□□□□ -0.35
VRK3-203ENST00000424804 ADCY2Q08462 1091 aa12.86□□□□□ -0.35
VRK3-203ENST00000424804 TRA2AQ13595 282 aaKnown RBP eCLIP12.86□□□□□ -0.35
VRK3-203ENST00000424804 CLCA4Q14CN2 919 aa12.86□□□□□ -0.35
VRK3-203ENST00000424804 PCSK7Q16549 785 aa12.86□□□□□ -0.35
VRK3-203ENST00000424804 MAP9Q49MG5 647 aa12.86□□□□□ -0.35
VRK3-203ENST00000424804 MANEAQ5SRI9 462 aa12.86□□□□□ -0.35
VRK3-203ENST00000424804 DOK6Q6PKX4 331 aa12.86□□□□□ -0.35
VRK3-203ENST00000424804 USP45Q70EL2 814 aa12.86□□□□□ -0.35
VRK3-203ENST00000424804 BZW1Q7L1Q6 419 aaKnown RBP12.86□□□□□ -0.35
VRK3-203ENST00000424804 SFRP1Q8N474 314 aa12.86□□□□□ -0.35
VRK3-203ENST00000424804 LPCAT1Q8NF37 534 aa12.86□□□□□ -0.35
VRK3-203ENST00000424804 SLC37A2Q8TED4 501 aa12.86□□□□□ -0.35
VRK3-203ENST00000424804 TFB1MQ8WVM0 346 aaKnown RBP12.86□□□□□ -0.35
VRK3-203ENST00000424804 AP2M1Q96CW1 435 aa12.86□□□□□ -0.35
VRK3-203ENST00000424804 CALR3Q96L12 384 aaKnown RBP12.86□□□□□ -0.35
VRK3-203ENST00000424804 OR2M4Q96R27 311 aa12.86□□□□□ -0.35
VRK3-203ENST00000424804 TAAR9Q96RI9 348 aa12.86□□□□□ -0.35
VRK3-203ENST00000424804 RIOK2Q9BVS4 552 aaKnown RBP12.86□□□□□ -0.35
VRK3-203ENST00000424804 GUCA1BQ9UMX6 200 aa12.86□□□□□ -0.35
VRK3-203ENST00000424804 PCDHA3Q9Y5H8 950 aa12.86□□□□□ -0.35
VRK3-203ENST00000424804 B3GALT1Q9Y5Z6 326 aa12.86□□□□□ -0.35
VRK3-203ENST00000424804 CCDC66A2RUB6 948 aa12.85□□□□□ -0.35
VRK3-203ENST00000424804 GOLGA6L3A6NEY3 463 aa12.85□□□□□ -0.35
VRK3-203ENST00000424804 FADS2P1A8MWK0 482 aa12.85□□□□□ -0.35
VRK3-203ENST00000424804 H7C0C1 242 aa12.85□□□□□ -0.35
VRK3-203ENST00000424804 TERTO14746 1132 aaKnown RBP12.85□□□□□ -0.35
VRK3-203ENST00000424804 FAM87AP0C7U9 286 aa12.85□□□□□ -0.35
VRK3-203ENST00000424804 ZNF30P17039 623 aa12.85□□□□□ -0.35
VRK3-203ENST00000424804 ATP5OP48047 213 aa12.85□□□□□ -0.35
VRK3-203ENST00000424804 NR2C2P49116 596 aa12.85□□□□□ -0.35
VRK3-203ENST00000424804 RWDD2BP57060 319 aa12.85□□□□□ -0.35
VRK3-203ENST00000424804 IFI35P80217 286 aaPredicted RBP12.85□□□□□ -0.35
VRK3-203ENST00000424804 NFKB2Q00653 900 aa12.85□□□□□ -0.35
VRK3-203ENST00000424804 NFATC3Q12968 1075 aa12.85□□□□□ -0.35
VRK3-203ENST00000424804 QPCTQ16769 361 aa12.85□□□□□ -0.35
VRK3-203ENST00000424804 HENMT1Q5T8I9 393 aaKnown RBP12.85□□□□□ -0.35
VRK3-203ENST00000424804 AADACL2Q6P093 401 aa12.85□□□□□ -0.35
VRK3-203ENST00000424804 TMEM71Q6P5X7 295 aa12.85□□□□□ -0.35
VRK3-203ENST00000424804 MARK2Q7KZI7 788 aaKnown RBP12.85□□□□□ -0.35
VRK3-203ENST00000424804 ARHGAP22Q7Z5H3 698 aa12.85□□□□□ -0.35
VRK3-203ENST00000424804 ZNF761Q86XN6 746 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms