RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 PHF12Q96QT6 1004 aa15.13■□□□□ 0.01
C9orf3-204ENST00000424143 DCUN1D5Q9BTE7 237 aa15.13■□□□□ 0.01
C9orf3-204ENST00000424143 CHID1Q9BWS9 393 aa15.13■□□□□ 0.01
C9orf3-204ENST00000424143 TLR9Q9NR96 1032 aa15.13■□□□□ 0.01
C9orf3-204ENST00000424143 MARCH4Q9P2E8 410 aaPredicted RBP15.13■□□□□ 0.01
C9orf3-204ENST00000424143 ERGIC3Q9Y282 383 aa15.13■□□□□ 0.01
C9orf3-204ENST00000424143 PCDHGA4Q9Y5G9 962 aa15.13■□□□□ 0.01
C9orf3-204ENST00000424143 HS3ST4Q9Y661 456 aa15.13■□□□□ 0.01
C9orf3-204ENST00000424143 DOCK4Q8N1I0 1966 aa15.12■□□□□ 0.01
C9orf3-204ENST00000424143 CCDC162PA2VCL2 907 aa15.12■□□□□ 0.01
C9orf3-204ENST00000424143 CCDC154A6NI56 674 aa15.12■□□□□ 0.01
C9orf3-204ENST00000424143 M0QZQ0 153 aa15.12■□□□□ 0.01
C9orf3-204ENST00000424143 UPK1AO00322 258 aa15.12■□□□□ 0.01
C9orf3-204ENST00000424143 TNFRSF10BO14763 440 aa15.12■□□□□ 0.01
C9orf3-204ENST00000424143 SERPINB7O75635 380 aa15.12■□□□□ 0.01
C9orf3-204ENST00000424143 CLPXO76031 633 aa15.12■□□□□ 0.01
C9orf3-204ENST00000424143 OCM2P0CE71 109 aa15.12■□□□□ 0.01
C9orf3-204ENST00000424143 OCMP0CE72 109 aaPredicted RBP15.12■□□□□ 0.01
C9orf3-204ENST00000424143 RAP2AP10114 183 aa15.12■□□□□ 0.01
C9orf3-204ENST00000424143 HRH2P25021 359 aa15.12■□□□□ 0.01
C9orf3-204ENST00000424143 CD86P42081 329 aa15.12■□□□□ 0.01
C9orf3-204ENST00000424143 POLR2JP52435 117 aaKnown RBP15.12■□□□□ 0.01
C9orf3-204ENST00000424143 ARSFP54793 590 aa15.12■□□□□ 0.01
C9orf3-204ENST00000424143 IL10RBQ08334 325 aa15.12■□□□□ 0.01
C9orf3-204ENST00000424143 MTA1Q13330 715 aa15.12■□□□□ 0.01
C9orf3-204ENST00000424143 CAPRIN1Q14444 709 aaKnown RBP15.12■□□□□ 0.01
C9orf3-204ENST00000424143 UPP1Q16831 310 aa15.12■□□□□ 0.01
C9orf3-204ENST00000424143 SMU1Q2TAY7 513 aa15.12■□□□□ 0.01
C9orf3-204ENST00000424143 ALG1LQ6GMV1 187 aa15.12■□□□□ 0.01
C9orf3-204ENST00000424143 NANOGP8Q6NSW7 305 aa15.12■□□□□ 0.01
C9orf3-204ENST00000424143 ZFAND4Q86XD8 727 aa15.12■□□□□ 0.01
C9orf3-204ENST00000424143 KIAA2013Q8IYS2 634 aa15.12■□□□□ 0.01
C9orf3-204ENST00000424143 CENPSQ8N2Z9 138 aa15.12■□□□□ 0.01
C9orf3-204ENST00000424143 FBXO39Q8N4B4 442 aa15.12■□□□□ 0.01
C9orf3-204ENST00000424143 NKAPQ8N5F7 415 aaKnown RBP15.12■□□□□ 0.01
C9orf3-204ENST00000424143 SNX31Q8N9S9 440 aa15.12■□□□□ 0.01
C9orf3-204ENST00000424143 NSMCE2Q96MF7 247 aa15.12■□□□□ 0.01
C9orf3-204ENST00000424143 ATXN3LQ9H3M9 355 aa15.12■□□□□ 0.01
C9orf3-204ENST00000424143 RETREG1Q9H6L5 497 aa15.12■□□□□ 0.01
C9orf3-204ENST00000424143 GORASP2Q9H8Y8 452 aa15.12■□□□□ 0.01
C9orf3-204ENST00000424143 NANOGQ9H9S0 305 aa15.12■□□□□ 0.01
C9orf3-204ENST00000424143 IL1RL2Q9HB29 575 aa15.12■□□□□ 0.01
C9orf3-204ENST00000424143 NTN4Q9HB63 628 aa15.12■□□□□ 0.01
C9orf3-204ENST00000424143 NT5MQ9NPB1 228 aa15.12■□□□□ 0.01
C9orf3-204ENST00000424143 HEBP1Q9NRV9 189 aa15.12■□□□□ 0.01
C9orf3-204ENST00000424143 NDFIP2Q9NV92 336 aa15.12■□□□□ 0.01
C9orf3-204ENST00000424143 BLOC1S6Q9UL45 172 aa15.12■□□□□ 0.01
C9orf3-204ENST00000424143 VPS9D1Q9Y2B5 631 aa15.12■□□□□ 0.01
C9orf3-204ENST00000424143 TLR6Q9Y2C9 796 aa15.12■□□□□ 0.01
C9orf3-204ENST00000424143 NAALAD2Q9Y3Q0 740 aa15.12■□□□□ 0.01
C9orf3-204ENST00000424143 DYNC1LI2O43237 492 aaPredicted RBP15.11■□□□□ 0.01
C9orf3-204ENST00000424143 ATP6V1G1O75348 118 aa15.11■□□□□ 0.01
C9orf3-204ENST00000424143 SOAT2O75908 522 aa15.11■□□□□ 0.01
C9orf3-204ENST00000424143 SNAP29O95721 258 aa15.11■□□□□ 0.01
C9orf3-204ENST00000424143 ALDH2P05091 517 aa15.11■□□□□ 0.01
C9orf3-204ENST00000424143 ALPLP05186 524 aa15.11■□□□□ 0.01
C9orf3-204ENST00000424143 THRBP10828 461 aa15.11■□□□□ 0.01
C9orf3-204ENST00000424143 IL1RNP18510 177 aa15.11■□□□□ 0.01
C9orf3-204ENST00000424143 MAP4P27816 1152 aaKnown RBP15.11■□□□□ 0.01
C9orf3-204ENST00000424143 PSMD7P51665 324 aa15.11■□□□□ 0.01
C9orf3-204ENST00000424143 CLCNKBP51801 687 aa15.11■□□□□ 0.01
C9orf3-204ENST00000424143 RABGGTBP53611 331 aa15.11■□□□□ 0.01
C9orf3-204ENST00000424143 FOXA1P55317 472 aa15.11■□□□□ 0.01
C9orf3-204ENST00000424143 IL18R1Q13478 541 aa15.11■□□□□ 0.01
C9orf3-204ENST00000424143 PFKFB4Q16877 469 aa15.11■□□□□ 0.01
C9orf3-204ENST00000424143 TIGD5Q53EQ6 642 aa15.11■□□□□ 0.01
C9orf3-204ENST00000424143 LDLRAD1Q5T700 205 aa15.11■□□□□ 0.01
C9orf3-204ENST00000424143 XAF1Q6GPH4 301 aa15.11■□□□□ 0.01
C9orf3-204ENST00000424143 RNF165Q6ZSG1 346 aa15.11■□□□□ 0.01
C9orf3-204ENST00000424143 FAM43BQ6ZT52 329 aaPredicted RBP15.11■□□□□ 0.01
C9orf3-204ENST00000424143 SCD5Q86SK9 330 aa15.11■□□□□ 0.01
C9orf3-204ENST00000424143 SVOPLQ8N434 492 aa15.11■□□□□ 0.01
C9orf3-204ENST00000424143 OR8J3Q8NGG0 315 aa15.11■□□□□ 0.01
C9orf3-204ENST00000424143 MAGEE2Q8TD90 523 aaPredicted RBP15.11■□□□□ 0.01
C9orf3-204ENST00000424143 SNRNP27Q8WVK2 155 aaKnown RBP15.11■□□□□ 0.01
C9orf3-204ENST00000424143 CASP10Q92851 521 aa15.11■□□□□ 0.01
C9orf3-204ENST00000424143 ZNF347Q96SE7 839 aa15.11■□□□□ 0.01
C9orf3-204ENST00000424143 KATNAL1Q9BW62 490 aa15.11■□□□□ 0.01
C9orf3-204ENST00000424143 ZYG11BQ9C0D3 744 aa15.11■□□□□ 0.01
C9orf3-204ENST00000424143 ZFYVE28Q9HCC9 887 aa15.11■□□□□ 0.01
C9orf3-204ENST00000424143 SUN2Q9UH99 717 aa15.11■□□□□ 0.01
C9orf3-204ENST00000424143 CLEC11AQ9Y240 323 aa15.11■□□□□ 0.01
C9orf3-204ENST00000424143 Q9Y3F1 56 aa15.11■□□□□ 0.01
C9orf3-204ENST00000424143 NLRC5Q86WI3 1866 aa15.11■□□□□ 0.01
C9orf3-204ENST00000424143 KPNA4O00629 521 aaPredicted RBP15.1■□□□□ 0.01
C9orf3-204ENST00000424143 SNX2O60749 519 aa15.1■□□□□ 0.01
C9orf3-204ENST00000424143 SEC24DO94855 1032 aaPredicted RBP15.1■□□□□ 0.01
C9orf3-204ENST00000424143 TYMPP19971 482 aa15.1■□□□□ 0.01
C9orf3-204ENST00000424143 BDNFP23560 247 aa15.1■□□□□ 0.01
C9orf3-204ENST00000424143 CRHBPP24387 322 aa15.1■□□□□ 0.01
C9orf3-204ENST00000424143 RPL10P27635 214 aaKnown RBP15.1■□□□□ 0.01
C9orf3-204ENST00000424143 STC1P52823 247 aa15.1■□□□□ 0.01
C9orf3-204ENST00000424143 YBEYP58557 167 aaPredicted RBP15.1■□□□□ 0.01
C9orf3-204ENST00000424143 RAD51Q06609 339 aa15.1■□□□□ 0.01
C9orf3-204ENST00000424143 PRKG2Q13237 762 aa15.1■□□□□ 0.01
C9orf3-204ENST00000424143 PCSK7Q16549 785 aa15.1■□□□□ 0.01
C9orf3-204ENST00000424143 RGS21Q2M5E4 152 aa15.1■□□□□ 0.01
C9orf3-204ENST00000424143 PARP15Q460N3 678 aa15.1■□□□□ 0.01
C9orf3-204ENST00000424143 ANKDD1AQ495B1 522 aa15.1■□□□□ 0.01
C9orf3-204ENST00000424143 FAM98BQ52LJ0 330 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms