RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 SCML4Q8N228 414 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 BBS5Q8N3I7 341 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 RIN3Q8TB24 985 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 GFM2Q969S9 779 aaKnown RBP11.85□□□□□ -0.51
PTPRN-204ENST00000423636 BIRC8Q96P09 236 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 PLEKHG4BQ96PX9 1271 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 TRIB3Q96RU7 358 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 HGH1Q9BTY7 390 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 LINC00597Q9H2U6 94 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 SOX17Q9H6I2 414 aaPredicted RBP11.85□□□□□ -0.51
PTPRN-204ENST00000423636 ASB8Q9H765 288 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 CERS4Q9HA82 394 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 ZFP14Q9HCL3 533 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 TAS2R13Q9NYV9 303 aa11.85□□□□□ -0.51
PTPRN-204ENST00000423636 CCNT2O60583 730 aaKnown RBP11.84□□□□□ -0.51
PTPRN-204ENST00000423636 TUFMP49411 452 aaKnown RBP11.84□□□□□ -0.51
PTPRN-204ENST00000423636 CCNHP51946 323 aaPredicted RBP11.84□□□□□ -0.51
PTPRN-204ENST00000423636 DGKQP52824 942 aa11.84□□□□□ -0.51
PTPRN-204ENST00000423636 UFM1P61960 85 aa11.84□□□□□ -0.51
PTPRN-204ENST00000423636 IKBKEQ14164 716 aa11.84□□□□□ -0.51
PTPRN-204ENST00000423636 ZRSR2Q15696 482 aaKnown RBP11.84□□□□□ -0.51
PTPRN-204ENST00000423636 TIGD2Q4W5G0 525 aa11.84□□□□□ -0.51
PTPRN-204ENST00000423636 EP400NLQ6ZTU2 488 aa11.84□□□□□ -0.51
PTPRN-204ENST00000423636 BEND7Q8N7W2 519 aaPredicted RBP11.84□□□□□ -0.51
PTPRN-204ENST00000423636 TSPAN17Q96FV3 270 aa11.84□□□□□ -0.51
PTPRN-204ENST00000423636 LRGUKQ96M69 825 aa11.84□□□□□ -0.51
PTPRN-204ENST00000423636 EGFL8Q99944 293 aa11.84□□□□□ -0.51
PTPRN-204ENST00000423636 NOL11Q9H8H0 719 aaKnown RBP11.84□□□□□ -0.51
PTPRN-204ENST00000423636 LATS2Q9NRM7 1088 aa11.84□□□□□ -0.51
PTPRN-204ENST00000423636 ABCB8Q9NUT2 735 aa11.84□□□□□ -0.51
PTPRN-204ENST00000423636 TRMT6Q9UJA5 497 aaKnown RBP11.84□□□□□ -0.51
PTPRN-204ENST00000423636 MID2Q9UJV3 735 aa11.84□□□□□ -0.51
PTPRN-204ENST00000423636 F5P12259 2224 aa11.84□□□□□ -0.51
PTPRN-204ENST00000423636 FAM92AA1XBS5 289 aa11.84□□□□□ -0.51
PTPRN-204ENST00000423636 KDELR3O43731 214 aa11.84□□□□□ -0.51
PTPRN-204ENST00000423636 PRAMEF1O95521 474 aa11.84□□□□□ -0.51
PTPRN-204ENST00000423636 CRTAMO95727 393 aa11.84□□□□□ -0.51
PTPRN-204ENST00000423636 HLA-DPA1P20036 260 aa11.84□□□□□ -0.51
PTPRN-204ENST00000423636 CAPN3P20807 821 aa11.84□□□□□ -0.51
PTPRN-204ENST00000423636 LPOP22079 712 aaPredicted RBP11.84□□□□□ -0.51
PTPRN-204ENST00000423636 FDXRP22570 491 aa11.84□□□□□ -0.51
PTPRN-204ENST00000423636 HERVK_113P63132 956 aa11.84□□□□□ -0.51
PTPRN-204ENST00000423636 HMGCS1Q01581 520 aa11.84□□□□□ -0.51
PTPRN-204ENST00000423636 SF1Q15637 639 aaKnown RBP11.84□□□□□ -0.51
PTPRN-204ENST00000423636 PTRHD1Q6GMV3 140 aaKnown RBP11.84□□□□□ -0.51
PTPRN-204ENST00000423636 FAM45BPQ6NSW5 357 aa11.84□□□□□ -0.51
PTPRN-204ENST00000423636 SYVN1Q86TM6 617 aa11.84□□□□□ -0.51
PTPRN-204ENST00000423636 FAM45AQ8TCE6 357 aa11.84□□□□□ -0.51
PTPRN-204ENST00000423636 CYB5D2Q8WUJ1 264 aa11.84□□□□□ -0.51
PTPRN-204ENST00000423636 FUBP1Q96AE4 644 aaKnown RBP11.84□□□□□ -0.51
PTPRN-204ENST00000423636 PAWRQ96IZ0 340 aaKnown RBP11.84□□□□□ -0.51
PTPRN-204ENST00000423636 FEM1CQ96JP0 617 aa11.84□□□□□ -0.51
PTPRN-204ENST00000423636 CNDP1Q96KN2 507 aa11.84□□□□□ -0.51
PTPRN-204ENST00000423636 MGME1Q9BQP7 344 aa11.84□□□□□ -0.51
PTPRN-204ENST00000423636 BEGAINQ9BUH8 593 aa11.84□□□□□ -0.51
PTPRN-204ENST00000423636 ERVK-6Q9BXR3 956 aa11.84□□□□□ -0.51
PTPRN-204ENST00000423636 CACNA2D2Q9NY47 1150 aa11.84□□□□□ -0.51
PTPRN-204ENST00000423636 IL37Q9NZH6 218 aa11.84□□□□□ -0.51
PTPRN-204ENST00000423636 THEGQ9P2T0 379 aa11.84□□□□□ -0.51
PTPRN-204ENST00000423636 MTRRQ9UBK8 725 aa11.84□□□□□ -0.51
PTPRN-204ENST00000423636 PCDHGA7Q9Y5G6 932 aa11.84□□□□□ -0.51
PTPRN-204ENST00000423636 CHD5Q8TDI0 1954 aa11.84□□□□□ -0.51
PTPRN-204ENST00000423636 A0A1B0GVM2 712 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 CCDC160A6NGH7 325 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 AP3B1O00203 1094 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 AZIN1O14977 448 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 SNX2O60749 519 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 ZDHHC11BP0C7U3 371 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 ME2P23368 584 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 ZNF140P52738 457 aaPredicted RBP11.83□□□□□ -0.52
PTPRN-204ENST00000423636 YBEYP58557 167 aaPredicted RBP11.83□□□□□ -0.52
PTPRN-204ENST00000423636 CDKL1Q00532 357 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 BEND5Q7L4P6 421 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 MYO1HQ8N1T3 1032 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 OR2T11Q8NH01 316 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 RP9Q8TA86 221 aaKnown RBP11.83□□□□□ -0.52
PTPRN-204ENST00000423636 ADAMTS19Q8TE59 1207 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 C1orf21Q9H246 121 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 ZDHHC6Q9H6R6 413 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 POLG2Q9UHN1 485 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 PHF24Q9UPV7 400 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 LRCH1Q9Y2L9 728 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 SLC30A1Q9Y6M5 507 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 CLGNO14967 610 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 CLDN11O75508 207 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 URODP06132 367 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 LYNP07948 512 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 ACADSP16219 412 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 CCR2P41597 374 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 ZNF33AQ06730 810 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 VEPH1Q14D04 833 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 PIGGQ5H8A4 983 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 DGKKQ5KSL6 1271 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 SLC8B1Q6J4K2 584 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 FRA10AC1Q70Z53 315 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 SLC43A3Q8NBI5 491 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 CDC26Q8NHZ8 85 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 VWCEQ96DN2 955 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 SEPHS2Q99611 448 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 KLHL4Q9C0H6 718 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms