RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 EPN1Q9Y6I3 576 aaPredicted RBP9.2□□□□□ -0.94
NUP50-206ENST00000422489 ADAMTS20P59510 1910 aa9.2□□□□□ -0.94
NUP50-206ENST00000422489 ANKRD11Q6UB99 2663 aaPredicted RBP9.19□□□□□ -0.94
NUP50-206ENST00000422489 GOLGA4Q13439 2230 aaKnown RBP9.19□□□□□ -0.94
NUP50-206ENST00000422489 URB1O60287 2271 aaKnown RBP9.19□□□□□ -0.94
NUP50-206ENST00000422489 hCG_1818297A0A087WSY0 165 aa9.19□□□□□ -0.94
NUP50-206ENST00000422489 IGHV1OR21-1A0A087WYE8 117 aa9.19□□□□□ -0.94
NUP50-206ENST00000422489 PRAMEF33A0A0G2JMD5 474 aa9.19□□□□□ -0.94
NUP50-206ENST00000422489 IGHV5-10-1A0A0J9YXX1 117 aa9.19□□□□□ -0.94
NUP50-206ENST00000422489 AURKAO14965 403 aa9.19□□□□□ -0.94
NUP50-206ENST00000422489 ATXN7O15265 892 aaPredicted RBP9.19□□□□□ -0.94
NUP50-206ENST00000422489 NVLO15381 856 aaKnown RBP9.19□□□□□ -0.94
NUP50-206ENST00000422489 MTSS1O43312 755 aa9.19□□□□□ -0.94
NUP50-206ENST00000422489 NUAK1O60285 661 aa9.19□□□□□ -0.94
NUP50-206ENST00000422489 PRAMEF10O60809 474 aa9.19□□□□□ -0.94
NUP50-206ENST00000422489 MTX2O75431 263 aa9.19□□□□□ -0.94
NUP50-206ENST00000422489 IPO7O95373 1038 aaKnown RBP9.19□□□□□ -0.94
NUP50-206ENST00000422489 LCA5LO95447 670 aa9.19□□□□□ -0.94
NUP50-206ENST00000422489 CSTF2P33240 577 aaKnown RBP eCLIP9.19□□□□□ -0.94
NUP50-206ENST00000422489 MARCKSL1P49006 195 aa9.19□□□□□ -0.94
NUP50-206ENST00000422489 HADHBP55084 474 aaKnown RBP9.19□□□□□ -0.94
NUP50-206ENST00000422489 WNT3AP56704 352 aa9.19□□□□□ -0.94
NUP50-206ENST00000422489 C19orf57Q0VDD7 668 aa9.19□□□□□ -0.94
NUP50-206ENST00000422489 WASHC5Q12768 1159 aa9.19□□□□□ -0.94
NUP50-206ENST00000422489 PRKD1Q15139 912 aaPredicted RBP9.19□□□□□ -0.94
NUP50-206ENST00000422489 NOMO1Q15155 1222 aa9.19□□□□□ -0.94
NUP50-206ENST00000422489 PLA2G4EQ3MJ16 856 aa9.19□□□□□ -0.94
NUP50-206ENST00000422489 TMEM164Q5U3C3 297 aa9.19□□□□□ -0.94
NUP50-206ENST00000422489 KIAA1614Q5VZ46 1190 aa9.19□□□□□ -0.94
NUP50-206ENST00000422489 IYDQ6PHW0 289 aa9.19□□□□□ -0.94
NUP50-206ENST00000422489 CRTC3Q6UUV7 619 aa9.19□□□□□ -0.94
NUP50-206ENST00000422489 ZNF438Q7Z4V0 828 aa9.19□□□□□ -0.94
NUP50-206ENST00000422489 ADGRG6Q86SQ4 1221 aa9.19□□□□□ -0.94
NUP50-206ENST00000422489 SLC9B2Q86UD5 537 aa9.19□□□□□ -0.94
NUP50-206ENST00000422489 TMTC1Q8IUR5 882 aa9.19□□□□□ -0.94
NUP50-206ENST00000422489 KATNAL2Q8IYT4 538 aa9.19□□□□□ -0.94
NUP50-206ENST00000422489 TRAM1L1Q8N609 369 aa9.19□□□□□ -0.94
NUP50-206ENST00000422489 OR10G6Q8NH81 332 aa9.19□□□□□ -0.94
NUP50-206ENST00000422489 HTR3CQ8WXA8 447 aa9.19□□□□□ -0.94
NUP50-206ENST00000422489 JPH3Q8WXH2 748 aaPredicted RBP9.19□□□□□ -0.94
NUP50-206ENST00000422489 KRT35Q92764 455 aa9.19□□□□□ -0.94
NUP50-206ENST00000422489 GLYATL1Q969I3 302 aa9.19□□□□□ -0.94
NUP50-206ENST00000422489 RBM41Q96IZ5 413 aaKnown RBP9.19□□□□□ -0.94
NUP50-206ENST00000422489 CCNL2Q96S94 520 aaPredicted RBP9.19□□□□□ -0.94
NUP50-206ENST00000422489 SRPK1Q96SB4 655 aaKnown RBP9.19□□□□□ -0.94
NUP50-206ENST00000422489 ZSCAN5AQ9BUG6 496 aa9.19□□□□□ -0.94
NUP50-206ENST00000422489 CARD9Q9H257 536 aa9.19□□□□□ -0.94
NUP50-206ENST00000422489 STN1Q9H668 368 aaKnown RBP9.19□□□□□ -0.94
NUP50-206ENST00000422489 RMI1Q9H9A7 625 aa9.19□□□□□ -0.94
NUP50-206ENST00000422489 PRDM8Q9NQV8 689 aa9.19□□□□□ -0.94
NUP50-206ENST00000422489 TMEM9Q9P0T7 183 aa9.19□□□□□ -0.94
NUP50-206ENST00000422489 TRIM10Q9UDY6 481 aa9.19□□□□□ -0.94
NUP50-206ENST00000422489 DNAJC16Q9Y2G8 782 aa9.19□□□□□ -0.94
NUP50-206ENST00000422489 PCDHGA7Q9Y5G6 932 aa9.19□□□□□ -0.94
NUP50-206ENST00000422489 SPEGQ15772 3267 aa9.19□□□□□ -0.94
NUP50-206ENST00000422489 ARID1BQ8NFD5 2236 aaPredicted RBP9.19□□□□□ -0.94
NUP50-206ENST00000422489 MACROD2A1Z1Q3 448 aa9.18□□□□□ -0.94
NUP50-206ENST00000422489 SOWAHDA6NJG2 315 aa9.18□□□□□ -0.94
NUP50-206ENST00000422489 BUD23O43709 281 aaKnown RBP9.18□□□□□ -0.94
NUP50-206ENST00000422489 CDK14O94921 469 aa9.18□□□□□ -0.94
NUP50-206ENST00000422489 NDUFA10O95299 355 aa9.18□□□□□ -0.94
NUP50-206ENST00000422489 FGF3P11487 239 aaPredicted RBP9.18□□□□□ -0.94
NUP50-206ENST00000422489 SLC2A4P14672 509 aa9.18□□□□□ -0.94
NUP50-206ENST00000422489 BPIP17213 487 aa9.18□□□□□ -0.94
NUP50-206ENST00000422489 CTNNA2P26232 953 aa9.18□□□□□ -0.94
NUP50-206ENST00000422489 RBL1P28749 1068 aa9.18□□□□□ -0.94
NUP50-206ENST00000422489 CD68P34810 354 aaPredicted RBP9.18□□□□□ -0.94
NUP50-206ENST00000422489 LIMK2P53671 638 aa9.18□□□□□ -0.94
NUP50-206ENST00000422489 RHDQ02161 417 aa9.18□□□□□ -0.94
NUP50-206ENST00000422489 HHEXQ03014 270 aa9.18□□□□□ -0.94
NUP50-206ENST00000422489 CFHR1Q03591 330 aa9.18□□□□□ -0.94
NUP50-206ENST00000422489 NR1D2Q14995 579 aa9.18□□□□□ -0.94
NUP50-206ENST00000422489 SEPT7Q16181 437 aaKnown RBP9.18□□□□□ -0.94
NUP50-206ENST00000422489 TAZQ16635 292 aa9.18□□□□□ -0.94
NUP50-206ENST00000422489 CLPPQ16740 277 aaPredicted RBP9.18□□□□□ -0.94
NUP50-206ENST00000422489 INSCQ1MX18 579 aa9.18□□□□□ -0.94
NUP50-206ENST00000422489 SIRPB2Q5JXA9 342 aa9.18□□□□□ -0.94
NUP50-206ENST00000422489 C11orf63Q6NUN7 778 aa9.18□□□□□ -0.94
NUP50-206ENST00000422489 TMEM71Q6P5X7 295 aa9.18□□□□□ -0.94
NUP50-206ENST00000422489 KDELC1Q6UW63 502 aa9.18□□□□□ -0.94
NUP50-206ENST00000422489 LRRTM4Q86VH4 590 aa9.18□□□□□ -0.94
NUP50-206ENST00000422489 FAM129CQ86XR2 697 aa9.18□□□□□ -0.94
NUP50-206ENST00000422489 PHYKPLQ8IUZ5 450 aa9.18□□□□□ -0.94
NUP50-206ENST00000422489 ZNF567Q8N184 647 aa9.18□□□□□ -0.94
NUP50-206ENST00000422489 SFRP1Q8N474 314 aa9.18□□□□□ -0.94
NUP50-206ENST00000422489 IPMKQ8NFU5 416 aa9.18□□□□□ -0.94
NUP50-206ENST00000422489 OR4D9Q8NGE8 314 aa9.18□□□□□ -0.94
NUP50-206ENST00000422489 BLOC1S5Q8TDH9 187 aa9.18□□□□□ -0.94
NUP50-206ENST00000422489 SH3KBP1Q96B97 665 aa9.18□□□□□ -0.94
NUP50-206ENST00000422489 TADA1Q96BN2 335 aa9.18□□□□□ -0.94
NUP50-206ENST00000422489 TTC25Q96NG3 672 aa9.18□□□□□ -0.94
NUP50-206ENST00000422489 PANX2Q96RD6 677 aa9.18□□□□□ -0.94
NUP50-206ENST00000422489 FCRL5Q96RD9 977 aa9.18□□□□□ -0.94
NUP50-206ENST00000422489 DPYSL5Q9BPU6 564 aa9.18□□□□□ -0.94
NUP50-206ENST00000422489 FERMT1Q9BQL6 677 aa9.18□□□□□ -0.94
NUP50-206ENST00000422489 SLC39A1Q9NY26 324 aa9.18□□□□□ -0.94
NUP50-206ENST00000422489 FOXJ2Q9P0K8 574 aa9.18□□□□□ -0.94
NUP50-206ENST00000422489 SLC23A2Q9UGH3 650 aa9.18□□□□□ -0.94
NUP50-206ENST00000422489 KLHL3Q9UH77 587 aa9.18□□□□□ -0.94
NUP50-206ENST00000422489 RSPH14Q9UHP6 348 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms