RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 OR13C4Q8NGS5 318 aa9.69□□□□□ -0.86
CMSS1-201ENST00000421999 SPPL3Q8TCT6 385 aa9.69□□□□□ -0.86
CMSS1-201ENST00000421999 CATSPER2Q96P56 530 aa9.69□□□□□ -0.86
CMSS1-201ENST00000421999 PIF1Q9H611 641 aa9.69□□□□□ -0.86
CMSS1-201ENST00000421999 YY1AP1Q9H869 796 aa9.69□□□□□ -0.86
CMSS1-201ENST00000421999 SLCO3A1Q9UIG8 710 aa9.69□□□□□ -0.86
CMSS1-201ENST00000421999 CPED1A4D0V7 1026 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 LAMTOR5O43504 91 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 MMP20O60882 483 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 FAM107AO95990 144 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 IRS1P35568 1242 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 CYP4F2P78329 520 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 NAE1Q13564 534 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 DHCR24Q15392 516 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 DNAL1Q4LDG9 190 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 MSS51Q4VC12 460 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 TSTD2Q5T7W7 516 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 C16orf89Q6UX73 402 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 BEND5Q7L4P6 421 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 LCN9Q8WX39 176 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 KHSRPQ92945 711 aaKnown RBP eCLIP9.68□□□□□ -0.862e-6■■■■□ 21
CMSS1-201ENST00000421999 CDCA3Q99618 268 aaPredicted RBP9.68□□□□□ -0.86
CMSS1-201ENST00000421999 CDH19Q9H159 772 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 THAP1Q9NVV9 213 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 C2orf71A6NGG8 1288 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 ZNF487B1APH4 448 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 ERAL1O75616 437 aaKnown RBP9.68□□□□□ -0.86
CMSS1-201ENST00000421999 PAK4O96013 591 aaPredicted RBP9.68□□□□□ -0.86
CMSS1-201ENST00000421999 GOT2P00505 430 aaKnown RBP9.68□□□□□ -0.86
CMSS1-201ENST00000421999 NKX3-2P78367 333 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 MPP1Q00013 466 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 MYLK3Q32MK0 819 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 C9orf50Q5SZB4 431 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 BRAT1Q6PJG6 821 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 UMODL1-AS1Q8N2C9 162 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 CLP1Q92989 425 aaKnown RBP9.68□□□□□ -0.86
CMSS1-201ENST00000421999 AZIN2Q96A70 460 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 ZNF599Q96NL3 588 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 QRFPRQ96P65 431 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 GBP5Q96PP8 586 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 EFCAB1Q9HAE3 211 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 ZNF334Q9HCZ1 680 aaPredicted RBP9.68□□□□□ -0.86
CMSS1-201ENST00000421999 ZDHHC7Q9NXF8 308 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 CDH7Q9ULB5 785 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 FAM237BA0A1B0GVD1 139 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 PEX11AO75192 247 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 GUCY1B2O75343 617 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 IL4RP24394 825 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 ARRB1P49407 418 aaPredicted RBP9.68□□□□□ -0.86
CMSS1-201ENST00000421999 HNRNPH2P55795 449 aaKnown RBP9.68□□□□□ -0.86
CMSS1-201ENST00000421999 ACTN3Q08043 901 aaPredicted RBP9.68□□□□□ -0.86
CMSS1-201ENST00000421999 SPIDRQ14159 915 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 LYSMD3Q7Z3D4 306 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 CAMKK1Q8N5S9 505 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 DTX3LQ8TDB6 740 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 SLC44A1Q8WWI5 657 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 SNX6Q9UNH7 406 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.68□□□□□ -0.86
CMSS1-201ENST00000421999 TCRBV5S1A1TA0A578 114 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 HHLA1C9JL84 531 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 RGS14O43566 566 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 PRAMEF11O60813 436 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 ALAS2P22557 587 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 ALDH4A1P30038 563 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 GNPDA1P46926 289 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 KCNJ11Q14654 390 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 FBXO48Q5FWF7 155 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 HECTD2Q5U5R9 776 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 IRGCQ6NXR0 463 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 TRABD2AQ86V40 505 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 TMEM25Q86YD3 366 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 DENND6AQ8IWF6 608 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 CEP70Q8NHQ1 597 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 NUS1Q96E22 293 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 VMP1Q96GC9 406 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 CEP295NLQ96MC4 621 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 AGAP2Q99490 1192 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 FEM1AQ9BSK4 669 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 RIOK2Q9BVS4 552 aaKnown RBP9.68□□□□□ -0.86
CMSS1-201ENST00000421999 SLC46A2Q9BY10 475 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 ZBP1Q9H171 429 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 LINC00597Q9H2U6 94 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 EIF2B3Q9NR50 452 aaKnown RBP9.68□□□□□ -0.86
CMSS1-201ENST00000421999 POLR3BQ9NW08 1133 aaPredicted RBP9.68□□□□□ -0.86
CMSS1-201ENST00000421999 MTMR10Q9NXD2 777 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 SIRPGQ9P1W8 387 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 ARL5AQ9Y689 179 aa9.68□□□□□ -0.86
CMSS1-201ENST00000421999 ATP6AP2A0A1C7CYW4 349 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 URADA6NGE7 173 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 ATP6AP2O75787 350 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 NUDT14O95848 222 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 NTRK1P04629 796 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 F7P08709 466 aaPredicted RBP9.67□□□□□ -0.86
CMSS1-201ENST00000421999 OCM2P0CE71 109 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 OCMP0CE72 109 aaPredicted RBP9.67□□□□□ -0.86
CMSS1-201ENST00000421999 GLDCP23378 1020 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 LMAN2Q12907 356 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 AP5B1Q2VPB7 878 aa9.67□□□□□ -0.86
CMSS1-201ENST00000421999 AASDHQ4L235 1098 aaPredicted RBP9.67□□□□□ -0.86
CMSS1-201ENST00000421999 CAPN13Q6MZZ7 669 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms