RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 C8orf48Q96LL4 319 aa13.26□□□□□ -0.29
MCF2L-213ENST00000421756 UPF3AQ9H1J1 476 aaKnown RBP13.26□□□□□ -0.29
MCF2L-213ENST00000421756 PRPF19Q9UMS4 504 aaKnown RBP13.26□□□□□ -0.29
MCF2L-213ENST00000421756 FGF1P05230 155 aa13.25□□□□□ -0.29
MCF2L-213ENST00000421756 CA5AP35218 305 aa13.25□□□□□ -0.29
MCF2L-213ENST00000421756 ZNF135P52742 658 aaPredicted RBP13.25□□□□□ -0.29
MCF2L-213ENST00000421756 TIAL1Q01085 375 aaKnown RBP eCLIP13.25□□□□□ -0.29
MCF2L-213ENST00000421756 TRIM71Q2Q1W2 868 aaKnown RBP13.25□□□□□ -0.29
MCF2L-213ENST00000421756 SLC2A7Q6PXP3 512 aa13.25□□□□□ -0.29
MCF2L-213ENST00000421756 KIAA0408Q6ZU52 694 aa13.25□□□□□ -0.29
MCF2L-213ENST00000421756 GPSM1Q86YR5 675 aa13.25□□□□□ -0.29
MCF2L-213ENST00000421756 STAG3L4Q8TBR4 150 aa13.25□□□□□ -0.29
MCF2L-213ENST00000421756 PYCR2Q96C36 320 aa13.25□□□□□ -0.29
MCF2L-213ENST00000421756 C1orf74Q96LT6 269 aa13.25□□□□□ -0.29
MCF2L-213ENST00000421756 DEFB118Q96PH6 123 aa13.25□□□□□ -0.29
MCF2L-213ENST00000421756 CCDC28BQ9BUN5 200 aa13.25□□□□□ -0.29
MCF2L-213ENST00000421756 SLC25A23Q9BV35 468 aa13.25□□□□□ -0.29
MCF2L-213ENST00000421756 TDRD1Q9BXT4 1180 aaKnown RBP13.25□□□□□ -0.29
MCF2L-213ENST00000421756 MAGED1Q9Y5V3 778 aaPredicted RBP13.25□□□□□ -0.29
MCF2L-213ENST00000421756 MYOFQ9NZM1 2061 aa13.25□□□□□ -0.29
MCF2L-213ENST00000421756 TDRD15B5MCY1 1934 aaKnown RBP13.25□□□□□ -0.29
MCF2L-213ENST00000421756 KANSL1LA0AUZ9 987 aa13.25□□□□□ -0.29
MCF2L-213ENST00000421756 NME4O00746 187 aa13.25□□□□□ -0.29
MCF2L-213ENST00000421756 NFKBIAP25963 317 aa13.25□□□□□ -0.29
MCF2L-213ENST00000421756 HOXC13P31276 330 aa13.25□□□□□ -0.29
MCF2L-213ENST00000421756 FRG1Q14331 258 aaKnown RBP13.25□□□□□ -0.29
MCF2L-213ENST00000421756 NADK2Q4G0N4 442 aa13.25□□□□□ -0.29
MCF2L-213ENST00000421756 PAGE3Q5JUK9 113 aa13.25□□□□□ -0.29
MCF2L-213ENST00000421756 ARTNQ5T4W7 220 aa13.25□□□□□ -0.29
MCF2L-213ENST00000421756 SYVN1Q86TM6 617 aa13.25□□□□□ -0.29
MCF2L-213ENST00000421756 SETD3Q86TU7 594 aaPredicted RBP13.25□□□□□ -0.29
MCF2L-213ENST00000421756 ARHGAP18Q8N392 663 aa13.25□□□□□ -0.29
MCF2L-213ENST00000421756 FAM47BQ8NA70 645 aa13.25□□□□□ -0.29
MCF2L-213ENST00000421756 NSUN3Q9H649 340 aaKnown RBP13.25□□□□□ -0.29
MCF2L-213ENST00000421756 PFDN4Q9NQP4 134 aa13.25□□□□□ -0.29
MCF2L-213ENST00000421756 TRPM5Q9NZQ8 1165 aa13.25□□□□□ -0.29
MCF2L-213ENST00000421756 CLEC4EQ9ULY5 219 aa13.25□□□□□ -0.29
MCF2L-213ENST00000421756 SPEGQ15772 3267 aa13.25□□□□□ -0.29
MCF2L-213ENST00000421756 C1orf232A0A0U1RR37 186 aa13.25□□□□□ -0.29
MCF2L-213ENST00000421756 MROH6A6NGR9 719 aa13.25□□□□□ -0.29
MCF2L-213ENST00000421756 LIN7AO14910 233 aaPredicted RBP13.25□□□□□ -0.29
MCF2L-213ENST00000421756 BCAS2O75934 225 aaPredicted RBP13.25□□□□□ -0.29
MCF2L-213ENST00000421756 GSNP06396 782 aa13.25□□□□□ -0.29
MCF2L-213ENST00000421756 PARP15Q460N3 678 aa13.25□□□□□ -0.29
MCF2L-213ENST00000421756 RFLNAQ6ZTI6 216 aa13.25□□□□□ -0.29
MCF2L-213ENST00000421756 ZNF683Q8IZ20 524 aa13.25□□□□□ -0.29
MCF2L-213ENST00000421756 NR1H4Q96RI1 486 aaPredicted RBP13.25□□□□□ -0.29
MCF2L-213ENST00000421756 CCT7Q99832 543 aa13.25□□□□□ -0.29
MCF2L-213ENST00000421756 C17orf80Q9BSJ5 609 aa13.25□□□□□ -0.29
MCF2L-213ENST00000421756 AARSD1Q9BTE6 412 aaKnown RBP13.25□□□□□ -0.29
MCF2L-213ENST00000421756 DCUN1D5Q9BTE7 237 aa13.25□□□□□ -0.29
MCF2L-213ENST00000421756 CIPCQ9C0C6 399 aa13.25□□□□□ -0.29
MCF2L-213ENST00000421756 RIMS3Q9UJD0 308 aa13.25□□□□□ -0.29
MCF2L-213ENST00000421756 SCN10AQ9Y5Y9 1956 aa13.25□□□□□ -0.29
MCF2L-213ENST00000421756 H3BSA7 217 aa13.24□□□□□ -0.29
MCF2L-213ENST00000421756 ACOT8O14734 319 aa13.24□□□□□ -0.29
MCF2L-213ENST00000421756 VPS26AO75436 327 aa13.24□□□□□ -0.29
MCF2L-213ENST00000421756 RTN3O95197 1032 aaPredicted RBP13.24□□□□□ -0.29
MCF2L-213ENST00000421756 ATP5BP06576 529 aaKnown RBP13.24□□□□□ -0.29
MCF2L-213ENST00000421756 HLA-DPA1P20036 260 aa13.24□□□□□ -0.29
MCF2L-213ENST00000421756 STK19P49842 368 aaPredicted RBP13.24□□□□□ -0.29
MCF2L-213ENST00000421756 GPR17Q13304 367 aa13.24□□□□□ -0.29
MCF2L-213ENST00000421756 LRP8Q14114 963 aa13.24□□□□□ -0.29
MCF2L-213ENST00000421756 ARHGEF7Q14155 803 aa13.24□□□□□ -0.29
MCF2L-213ENST00000421756 ZNF366Q8N895 744 aa13.24□□□□□ -0.29
MCF2L-213ENST00000421756 MAGEE2Q8TD90 523 aaPredicted RBP13.24□□□□□ -0.29
MCF2L-213ENST00000421756 CCDC126Q96EE4 140 aa13.24□□□□□ -0.29
MCF2L-213ENST00000421756 RNF145Q96MT1 663 aa13.24□□□□□ -0.29
MCF2L-213ENST00000421756 UNC93B1Q9H1C4 597 aa13.24□□□□□ -0.29
MCF2L-213ENST00000421756 ASB8Q9H765 288 aa13.24□□□□□ -0.29
MCF2L-213ENST00000421756 FARSBQ9NSD9 589 aaKnown RBP13.24□□□□□ -0.29
MCF2L-213ENST00000421756 CNOT6Q9ULM6 557 aaKnown RBP13.24□□□□□ -0.29
MCF2L-213ENST00000421756 NYNRINQ9P2P1 1898 aaKnown RBP13.24□□□□□ -0.29
MCF2L-213ENST00000421756 CASP8AP2Q9UKL3 1982 aa13.24□□□□□ -0.29
MCF2L-213ENST00000421756 LOC285095A0A1B0GVY8 99 aa13.24□□□□□ -0.29
MCF2L-213ENST00000421756 FAM155AB1AL88 458 aaPredicted RBP13.24□□□□□ -0.29
MCF2L-213ENST00000421756 STC2O76061 302 aa13.24□□□□□ -0.29
MCF2L-213ENST00000421756 LRATO95237 230 aa13.24□□□□□ -0.29
MCF2L-213ENST00000421756 CLDN7O95471 211 aa13.24□□□□□ -0.29
MCF2L-213ENST00000421756 EOMESO95936 686 aa13.24□□□□□ -0.29
MCF2L-213ENST00000421756 CAPN1P07384 714 aa13.24□□□□□ -0.29
MCF2L-213ENST00000421756 KCNK10P57789 538 aa13.24□□□□□ -0.29
MCF2L-213ENST00000421756 LARP4Q71RC2 724 aaKnown RBP eCLIP13.24□□□□□ -0.29
MCF2L-213ENST00000421756 ANKRD46Q86W74 232 aa13.24□□□□□ -0.29
MCF2L-213ENST00000421756 APCDD1Q8J025 514 aa13.24□□□□□ -0.29
MCF2L-213ENST00000421756 FUBP3Q96I24 572 aaKnown RBP eCLIP13.24□□□□□ -0.29
MCF2L-213ENST00000421756 SPATA16Q9BXB7 569 aa13.24□□□□□ -0.29
MCF2L-213ENST00000421756 Q9H521 79 aa13.24□□□□□ -0.29
MCF2L-213ENST00000421756 TMEM161AQ9NX61 479 aa13.24□□□□□ -0.29
MCF2L-213ENST00000421756 MAP10Q9P2G4 905 aa13.24□□□□□ -0.29
MCF2L-213ENST00000421756 PKP3Q9Y446 797 aa13.24□□□□□ -0.29
MCF2L-213ENST00000421756 MYLKQ15746 1914 aa13.24□□□□□ -0.29
MCF2L-213ENST00000421756 ANKRD66B4E2M5 251 aa13.24□□□□□ -0.29
MCF2L-213ENST00000421756 SOCS2O14508 198 aa13.24□□□□□ -0.29
MCF2L-213ENST00000421756 FAM163BP0C2L3 166 aa13.24□□□□□ -0.29
MCF2L-213ENST00000421756 SLC2A4P14672 509 aa13.24□□□□□ -0.29
MCF2L-213ENST00000421756 LBPP18428 481 aa13.24□□□□□ -0.29
MCF2L-213ENST00000421756 LPOP22079 712 aaPredicted RBP13.24□□□□□ -0.29
MCF2L-213ENST00000421756 IL2P60568 153 aa13.24□□□□□ -0.29
MCF2L-213ENST00000421756 MYBPC1Q00872 1141 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms