RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 FPGTO14772 594 aa12.38□□□□□ -0.43
TMEM53-206ENST00000420706 INPP4BO15327 924 aa12.38□□□□□ -0.43
TMEM53-206ENST00000420706 GALR2O43603 387 aaPredicted RBP12.38□□□□□ -0.43
TMEM53-206ENST00000420706 TCEA3O75764 348 aa12.38□□□□□ -0.43
TMEM53-206ENST00000420706 HAUS5O94927 633 aa12.38□□□□□ -0.43
TMEM53-206ENST00000420706 SLC25A14O95258 325 aaPredicted RBP12.38□□□□□ -0.43
TMEM53-206ENST00000420706 CD27P26842 260 aa12.38□□□□□ -0.43
TMEM53-206ENST00000420706 GCAP28676 217 aa12.38□□□□□ -0.43
TMEM53-206ENST00000420706 PMLP29590 882 aa12.38□□□□□ -0.43
TMEM53-206ENST00000420706 AKT2P31751 481 aa12.38□□□□□ -0.43
TMEM53-206ENST00000420706 CNR2P34972 360 aa12.38□□□□□ -0.43
TMEM53-206ENST00000420706 PPARGP37231 505 aaPredicted RBP12.38□□□□□ -0.43
TMEM53-206ENST00000420706 MSH2P43246 934 aa12.38□□□□□ -0.43
TMEM53-206ENST00000420706 TTPAP49638 278 aa12.38□□□□□ -0.43
TMEM53-206ENST00000420706 AARS2Q5JTZ9 985 aaKnown RBP12.38□□□□□ -0.43
TMEM53-206ENST00000420706 GPRC6AQ5T6X5 926 aa12.38□□□□□ -0.43
TMEM53-206ENST00000420706 KDM7AQ6ZMT4 941 aa12.38□□□□□ -0.43
TMEM53-206ENST00000420706 KIAA0408Q6ZU52 694 aa12.38□□□□□ -0.43
TMEM53-206ENST00000420706 HDXQ7Z353 690 aa12.38□□□□□ -0.43
TMEM53-206ENST00000420706 STRA8Q7Z7C7 330 aa12.38□□□□□ -0.43
TMEM53-206ENST00000420706 GALNT7Q86SF2 657 aa12.38□□□□□ -0.43
TMEM53-206ENST00000420706 C11orf74Q86VG3 221 aa12.38□□□□□ -0.43
TMEM53-206ENST00000420706 TMEFF1Q8IYR6 380 aa12.38□□□□□ -0.43
TMEM53-206ENST00000420706 TMEM145Q8NBT3 493 aa12.38□□□□□ -0.43
TMEM53-206ENST00000420706 ZBTB44Q8NCP5 570 aa12.38□□□□□ -0.43
TMEM53-206ENST00000420706 SLC44A1Q8WWI5 657 aa12.38□□□□□ -0.43
TMEM53-206ENST00000420706 FOXJ1Q92949 421 aa12.38□□□□□ -0.43
TMEM53-206ENST00000420706 MRRFQ96E11 262 aaKnown RBP12.38□□□□□ -0.43
TMEM53-206ENST00000420706 COX14Q96I36 57 aa12.38□□□□□ -0.43
TMEM53-206ENST00000420706 HIC2Q96JB3 615 aa12.38□□□□□ -0.43
TMEM53-206ENST00000420706 ZIM3Q96PE6 472 aa12.38□□□□□ -0.43
TMEM53-206ENST00000420706 TTC1Q99614 292 aa12.38□□□□□ -0.43
TMEM53-206ENST00000420706 CPNE1Q99829 537 aa12.38□□□□□ -0.43
TMEM53-206ENST00000420706 APOOQ9BUR5 198 aa12.38□□□□□ -0.43
TMEM53-206ENST00000420706 TEX101Q9BY14 249 aa12.38□□□□□ -0.43
TMEM53-206ENST00000420706 FBXO6Q9NRD1 293 aaPredicted RBP12.38□□□□□ -0.43
TMEM53-206ENST00000420706 FETUBQ9UGM5 382 aa12.38□□□□□ -0.43
TMEM53-206ENST00000420706 CA5BQ9Y2D0 317 aa12.38□□□□□ -0.43
TMEM53-206ENST00000420706 PSAT1Q9Y617 370 aa12.38□□□□□ -0.43
TMEM53-206ENST00000420706 ABCA7Q8IZY2 2146 aa12.38□□□□□ -0.43
TMEM53-206ENST00000420706 POM121BA6NF01 834 aa12.37□□□□□ -0.43
TMEM53-206ENST00000420706 PFDN6O15212 129 aa12.37□□□□□ -0.43
TMEM53-206ENST00000420706 NDUFS3O75489 264 aa12.37□□□□□ -0.43
TMEM53-206ENST00000420706 FAM155BO75949 473 aa12.37□□□□□ -0.43
TMEM53-206ENST00000420706 HOXC4P09017 264 aaPredicted RBP12.37□□□□□ -0.43
TMEM53-206ENST00000420706 MAOBP27338 520 aa12.37□□□□□ -0.43
TMEM53-206ENST00000420706 GP5P40197 560 aa12.37□□□□□ -0.43
TMEM53-206ENST00000420706 CSE1LP55060 971 aaKnown RBP12.37□□□□□ -0.43
TMEM53-206ENST00000420706 CLDN2P57739 230 aa12.37□□□□□ -0.43
TMEM53-206ENST00000420706 CDK3Q00526 305 aa12.37□□□□□ -0.43
TMEM53-206ENST00000420706 ITIH4Q14624 930 aa12.37□□□□□ -0.43
TMEM53-206ENST00000420706 LDLRAP1Q5SW96 308 aa12.37□□□□□ -0.43
TMEM53-206ENST00000420706 ZNF648Q5T619 568 aaPredicted RBP12.37□□□□□ -0.43
TMEM53-206ENST00000420706 GRTP1Q5TC63 336 aa12.37□□□□□ -0.43
TMEM53-206ENST00000420706 CNSTQ6PJW8 725 aa12.37□□□□□ -0.43
TMEM53-206ENST00000420706 ADGRD1Q6QNK2 874 aa12.37□□□□□ -0.43
TMEM53-206ENST00000420706 LRIG3Q6UXM1 1119 aa12.37□□□□□ -0.43
TMEM53-206ENST00000420706 PACS1Q6VY07 963 aa12.37□□□□□ -0.43
TMEM53-206ENST00000420706 GCNT7Q6ZNI0 430 aa12.37□□□□□ -0.43
TMEM53-206ENST00000420706 LPCAT2Q7L5N7 544 aa12.37□□□□□ -0.43
TMEM53-206ENST00000420706 HEATR4Q86WZ0 1026 aa12.37□□□□□ -0.43
TMEM53-206ENST00000420706 DDHD1Q8NEL9 900 aa12.37□□□□□ -0.43
TMEM53-206ENST00000420706 GDAP1Q8TB36 358 aa12.37□□□□□ -0.43
TMEM53-206ENST00000420706 DNASE2BQ8WZ79 361 aa12.37□□□□□ -0.43
TMEM53-206ENST00000420706 SNX19Q92543 992 aa12.37□□□□□ -0.43
TMEM53-206ENST00000420706 FUBP1Q96AE4 644 aaKnown RBP12.37□□□□□ -0.43
TMEM53-206ENST00000420706 CCDC97Q96F63 343 aaPredicted RBP12.37□□□□□ -0.43
TMEM53-206ENST00000420706 SERAC1Q96JX3 654 aa12.37□□□□□ -0.43
TMEM53-206ENST00000420706 HSPA12BQ96MM6 686 aa12.37□□□□□ -0.43
TMEM53-206ENST00000420706 PAFAH2Q99487 392 aa12.37□□□□□ -0.43
TMEM53-206ENST00000420706 COPS8Q99627 209 aa12.37□□□□□ -0.43
TMEM53-206ENST00000420706 MCMBPQ9BTE3 642 aa12.37□□□□□ -0.43
TMEM53-206ENST00000420706 DHRS4Q9BTZ2 278 aa12.37□□□□□ -0.43
TMEM53-206ENST00000420706 TMEM109Q9BVC6 243 aa12.37□□□□□ -0.43
TMEM53-206ENST00000420706 BOCQ9BWV1 1114 aa12.37□□□□□ -0.43
TMEM53-206ENST00000420706 LGR4Q9BXB1 951 aa12.37□□□□□ -0.43
TMEM53-206ENST00000420706 ROPN1BQ9BZX4 212 aaPredicted RBP12.37□□□□□ -0.43
TMEM53-206ENST00000420706 ROPN1Q9HAT0 212 aaPredicted RBP12.37□□□□□ -0.43
TMEM53-206ENST00000420706 INTS10Q9NVR2 710 aaKnown RBP12.37□□□□□ -0.43
TMEM53-206ENST00000420706 EIF2B4Q9UI10 523 aaKnown RBP12.37□□□□□ -0.43
TMEM53-206ENST00000420706 SLC24A2Q9UI40 661 aa12.37□□□□□ -0.43
TMEM53-206ENST00000420706 THADAQ6YHU6 1953 aa12.36□□□□□ -0.43
TMEM53-206ENST00000420706 IGLV3-16A0A075B6K0 115 aa12.36□□□□□ -0.43
TMEM53-206ENST00000420706 MEI4A8MW99 385 aa12.36□□□□□ -0.43
TMEM53-206ENST00000420706 H0Y8X5 98 aa12.36□□□□□ -0.43
TMEM53-206ENST00000420706 TOR1BO14657 336 aa12.36□□□□□ -0.43
TMEM53-206ENST00000420706 OR1I1O60431 355 aa12.36□□□□□ -0.43
TMEM53-206ENST00000420706 LILRB5O75023 590 aa12.36□□□□□ -0.43
TMEM53-206ENST00000420706 MTX2O75431 263 aa12.36□□□□□ -0.43
TMEM53-206ENST00000420706 ZNF7P17097 686 aaPredicted RBP12.36□□□□□ -0.43
TMEM53-206ENST00000420706 RPS3P23396 243 aaKnown RBP eCLIP12.36□□□□□ -0.43
TMEM53-206ENST00000420706 PTGER3P43115 390 aa12.36□□□□□ -0.43
TMEM53-206ENST00000420706 CD151P48509 253 aa12.36□□□□□ -0.43
TMEM53-206ENST00000420706 EIF3BP55884 814 aaKnown RBP12.36□□□□□ -0.43
TMEM53-206ENST00000420706 PFN3P60673 137 aa12.36□□□□□ -0.43
TMEM53-206ENST00000420706 YPEL5P62699 121 aa12.36□□□□□ -0.43
TMEM53-206ENST00000420706 B4GALNT1Q00973 533 aa12.36□□□□□ -0.43
TMEM53-206ENST00000420706 IFFO1Q0D2I5 559 aa12.36□□□□□ -0.43
TMEM53-206ENST00000420706 TMEM115Q12893 351 aaPredicted RBP12.36□□□□□ -0.43
TMEM53-206ENST00000420706 PLK5Q496M5 336 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms