RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 KIAA1257Q9ULG3 409 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 CAB39Q9Y376 341 aaPredicted RBP7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 NRCAMQ92823 1304 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 CEP350Q5VT06 3117 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 TPH1P17752 444 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 M6PRP20645 277 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 SOX11P35716 441 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 NDST1P52848 882 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 PLK1P53350 603 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 PPP2R2BQ00005 443 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 INCA1Q0VD86 236 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 NFE2Q16621 373 aaPredicted RBP7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 ZNF404Q494X3 552 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 ZNF691Q5VV52 312 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 PNCKQ6P2M8 343 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 NEK5Q6P3R8 708 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 DENND6AQ8IWF6 608 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 ELMOD2Q8IZ81 293 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 TMEM130Q8N3G9 435 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 LPAR1Q92633 364 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 APOL2Q9BQE5 337 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 MLPHQ9BV36 600 aaPredicted RBP7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 KIFC1Q9BW19 673 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 B3GNT5Q9BYG0 378 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 SLA2Q9H6Q3 261 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 SMURF2Q9HAU4 748 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 ADPRHL2Q9NX46 363 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 OPTCQ9UBM4 332 aa7.98□□□□□ -1.13
HMGXB4-202ENST00000418170 A0A1W2PP18 115 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 FAM92AA1XBS5 289 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 HAT1O14929 419 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 SNX2O60749 519 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 RGS20O76081 388 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 NR3C2P08235 984 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 RAP2AP10114 183 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 FSHRP23945 695 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 CD6P30203 668 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 OSTNP61366 133 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 CTBP1Q13363 440 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 DUSP7Q16829 419 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 PKDCCQ504Y2 493 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 VARS2Q5ST30 1063 aaKnown RBP7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 ZNF470Q6ECI4 717 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 ZDHHC17Q8IUH5 632 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 GRAMD2AQ8IUY3 354 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 MCOLN3Q8TDD5 553 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 TSPEARQ8WU66 669 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 FBLIM1Q8WUP2 373 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 ZHX1-C8orf76Q96EF9 292 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 NSMCE2Q96MF7 247 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 TM9SF3Q9HD45 589 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 SETD4Q9NVD3 440 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 USE1Q9NZ43 259 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 PGAP2Q9UHJ9 254 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 PCM1Q15154 2024 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 SSC5DA1L4H1 1573 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 YDJCA8MPS7 323 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 SPATA31C2B4DYI2 1134 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 H0Y626 953 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 MTSS1O43312 755 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 FKBP9O95302 570 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 TRIM16O95361 564 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 ITGB3P05106 788 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 MAGP20916 626 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 MTHFRP42898 656 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 ST13P50502 369 aaKnown RBP7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 ZNF45Q02386 682 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 CSHL1Q14406 222 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 CLCA4Q14CN2 919 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 PAFAH1B3Q15102 231 aaKnown RBP7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 NPTX1Q15818 432 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 CDONQ4KMG0 1287 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 PODNQ7Z5L7 613 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 GATAD2AQ86YP4 633 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 PHYKPLQ8IUZ5 450 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 SLC22A9Q8IVM8 553 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 C12orf29Q8N999 325 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 TTC9Q92623 222 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 REXO5Q96IC2 774 aaKnown RBP7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 MIR1-1HGQ9H1L0 117 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 SPON1Q9HCB6 807 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 USP22Q9UPT9 525 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 PCDHGA10Q9Y5H3 936 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 MAFBQ9Y5Q3 323 aaPredicted RBP7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 LOC100130705A0A1B0GUX0 176 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 TYW5A2RUC4 315 aaKnown RBP7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 METTL15A6NJ78 407 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 ERVH48-1M5A8F1 160 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 XPNPEP2O43895 674 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 KPNA6O60684 536 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 KATNA1O75449 491 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 CNTN5O94779 1100 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 NFICP08651 508 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 GTF2E2P29084 291 aaKnown RBP7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 RRM2P31350 389 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 RYKP34925 604 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 MAP2K4P45985 399 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 FKBP1AP62942 108 aaKnown RBP7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 FADDQ13158 208 aa7.97□□□□□ -1.13
HMGXB4-202ENST00000418170 GRB7Q14451 532 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms