RNA–Protein interactions for RNA: ENST00000417352.5

COPS3-202, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-202ENST00000417352 RALGPS1Q5JS13 557 aa6.92□□□□□ -1.3
COPS3-202ENST00000417352 FAM182AQ5T1J6 154 aa6.92□□□□□ -1.3
COPS3-202ENST00000417352 ZNF648Q5T619 568 aaPredicted RBP6.92□□□□□ -1.3
COPS3-202ENST00000417352 ANKS6Q68DC2 871 aa6.92□□□□□ -1.3
COPS3-202ENST00000417352 CCDC70Q6NSX1 233 aa6.92□□□□□ -1.3
COPS3-202ENST00000417352 C16orf46Q6P387 395 aa6.92□□□□□ -1.3
COPS3-202ENST00000417352 ALKBH5Q6P6C2 394 aaKnown RBP6.92□□□□□ -1.3
COPS3-202ENST00000417352 CRTC3Q6UUV7 619 aa6.92□□□□□ -1.3
COPS3-202ENST00000417352 ATG14Q6ZNE5 492 aa6.92□□□□□ -1.3
COPS3-202ENST00000417352 B4GALNT4Q76KP1 1039 aa6.92□□□□□ -1.3
COPS3-202ENST00000417352 SLC9B2Q86UD5 537 aa6.92□□□□□ -1.3
COPS3-202ENST00000417352 LUZP1Q86V48 1076 aa6.92□□□□□ -1.3
COPS3-202ENST00000417352 SLITRK4Q8IW52 837 aa6.92□□□□□ -1.3
COPS3-202ENST00000417352 TRIM48Q8IWZ4 208 aa6.92□□□□□ -1.3
COPS3-202ENST00000417352 UNC5BQ8IZJ1 945 aa6.92□□□□□ -1.3
COPS3-202ENST00000417352 TTC30BQ8N4P2 665 aa6.92□□□□□ -1.3
COPS3-202ENST00000417352 OR4D9Q8NGE8 314 aa6.92□□□□□ -1.3
COPS3-202ENST00000417352 GDAP1Q8TB36 358 aa6.92□□□□□ -1.3
COPS3-202ENST00000417352 ZNF564Q8TBZ8 553 aaPredicted RBP6.92□□□□□ -1.3
COPS3-202ENST00000417352 SNRNP27Q8WVK2 155 aaKnown RBP6.92□□□□□ -1.3
COPS3-202ENST00000417352 TEKT4Q8WW24 435 aa6.92□□□□□ -1.3
COPS3-202ENST00000417352 PMEPA1Q969W9 287 aa6.92□□□□□ -1.3
COPS3-202ENST00000417352 ELMO2Q96JJ3 720 aa6.92□□□□□ -1.3
COPS3-202ENST00000417352 BPIFA3Q9BQP9 254 aa6.92□□□□□ -1.3
COPS3-202ENST00000417352 MLPHQ9BV36 600 aaPredicted RBP6.92□□□□□ -1.3
COPS3-202ENST00000417352 ADGRE3Q9BY15 652 aa6.92□□□□□ -1.3
COPS3-202ENST00000417352 CEP41Q9BYV8 373 aa6.92□□□□□ -1.3
COPS3-202ENST00000417352 ISCUQ9H1K1 167 aa6.92□□□□□ -1.3
COPS3-202ENST00000417352 FAM83DQ9H4H8 585 aa6.92□□□□□ -1.3
COPS3-202ENST00000417352 GPN2Q9H9Y4 310 aaPredicted RBP6.92□□□□□ -1.3
COPS3-202ENST00000417352 PCDH9Q9HC56 1237 aa6.92□□□□□ -1.3
COPS3-202ENST00000417352 ZNF71Q9NQZ8 489 aaPredicted RBP6.92□□□□□ -1.3
COPS3-202ENST00000417352 PKD2L2Q9NZM6 624 aa6.92□□□□□ -1.3
COPS3-202ENST00000417352 TRIM10Q9UDY6 481 aa6.92□□□□□ -1.3
COPS3-202ENST00000417352 SLC17A4Q9Y2C5 497 aa6.92□□□□□ -1.3
COPS3-202ENST00000417352 DNAJC16Q9Y2G8 782 aa6.92□□□□□ -1.3
COPS3-202ENST00000417352 LUC7L2Q9Y383 392 aaKnown RBP6.92□□□□□ -1.3
COPS3-202ENST00000417352 B3GALT1Q9Y5Z6 326 aa6.92□□□□□ -1.3
COPS3-202ENST00000417352 CFAP46Q8IYW2 2715 aa6.92□□□□□ -1.3
COPS3-202ENST00000417352 ZFC3H1O60293 1989 aaKnown RBP6.91□□□□□ -1.3
COPS3-202ENST00000417352 A0A0J9YYE9 177 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 LRRD1A4D1F6 860 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 KCNK1O00180 336 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 HGSO14964 777 aaPredicted RBP6.91□□□□□ -1.3
COPS3-202ENST00000417352 PPFIA2O75334 1257 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 RASSF9O75901 435 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 PEX11BO96011 259 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 TRBC1P01850 177 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 PIRTP0C851 137 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 LIFP15018 202 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 ZNF30P17039 623 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 TYRP1P17643 537 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 AMD1P17707 334 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 WT1P19544 449 aaPredicted RBP6.91□□□□□ -1.3
COPS3-202ENST00000417352 CR2P20023 1033 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 CCNCP24863 283 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 MAN1A1P33908 653 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 UGT1A3P35503 534 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 TNNT3P45378 269 aaPredicted RBP6.91□□□□□ -1.3
COPS3-202ENST00000417352 CCR10P46092 362 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 GSK3AP49840 483 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 SEPHS1P49903 392 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 DYNLT1P63172 113 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 GPLD1P80108 840 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 SLC25A11Q02978 314 aaKnown RBP6.91□□□□□ -1.3
COPS3-202ENST00000417352 DPTQ07507 201 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 LRP8Q14114 963 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 DPYSL3Q14195 570 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 GALNT3Q14435 633 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 MESDQ14696 234 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 PDK2Q15119 407 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 INSCQ1MX18 579 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 TMEM71Q6P5X7 295 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 BORAQ6PGQ7 559 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 ADAMTSL4Q6UY14 1074 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 TECPR1Q7Z6L1 1165 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 LRRC49Q8IUZ0 686 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 PHYKPLQ8IUZ5 450 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 CCDC13Q8IYE1 715 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 SLC37A2Q8TED4 501 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 CTNNBL1Q8WYA6 563 aaPredicted RBP6.91□□□□□ -1.3
COPS3-202ENST00000417352 NKD1Q969G9 470 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 SH3KBP1Q96B97 665 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 TTC25Q96NG3 672 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 AGAP3Q96P47 875 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 ANP32EQ9BTT0 268 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 GPR63Q9BZJ6 419 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 OR2AG1Q9H205 316 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 PRDM8Q9NQV8 689 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 KLC4Q9NSK0 619 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 TBC1D29Q9UFV1 150 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 IL17BQ9UHF5 180 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 DNPEPQ9ULA0 475 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 SHOC2Q9UQ13 582 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 ST14Q9Y5Y6 855 aa6.91□□□□□ -1.3
COPS3-202ENST00000417352 SMG1Q96Q15 3661 aaKnown RBP6.91□□□□□ -1.3
COPS3-202ENST00000417352 FLNBO75369 2602 aaKnown RBP6.9□□□□□ -1.3
COPS3-202ENST00000417352 PDZK1P1A8MUH7 402 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 ANKRD66B4E2M5 251 aa6.9□□□□□ -1.3
COPS3-202ENST00000417352 POLR1CO15160 346 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms