RNA–Protein interactions for RNA: ENST00000415920.5

CPNE1-209, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-209ENST00000415920 Q6ZVL8 140 aa13.55□□□□□ -0.24
CPNE1-209ENST00000415920 TMC3Q7Z5M5 1100 aa13.55□□□□□ -0.24
CPNE1-209ENST00000415920 DTD2Q96FN9 168 aa13.55□□□□□ -0.24
CPNE1-209ENST00000415920 COQ10AQ96MF6 247 aa13.55□□□□□ -0.24
CPNE1-209ENST00000415920 C1QTNF7Q9BXJ2 289 aa13.55□□□□□ -0.24
CPNE1-209ENST00000415920 CHRAC1Q9NRG0 131 aa13.55□□□□□ -0.24
CPNE1-209ENST00000415920 FKBPLQ9UIM3 349 aa13.55□□□□□ -0.24
CPNE1-209ENST00000415920 SOX13Q9UN79 622 aa13.55□□□□□ -0.24
CPNE1-209ENST00000415920 TDRD6O60522 2096 aaKnown RBP13.55□□□□□ -0.24
CPNE1-209ENST00000415920 BPTFQ12830 3046 aa13.55□□□□□ -0.24
CPNE1-209ENST00000415920 COL5A1P20908 1838 aaPredicted RBP13.55□□□□□ -0.24
CPNE1-209ENST00000415920 SLC31A1O15431 190 aa13.54□□□□□ -0.24
CPNE1-209ENST00000415920 PRB1P04280 392 aa13.54□□□□□ -0.24
CPNE1-209ENST00000415920 BPIP17213 487 aa13.54□□□□□ -0.24
CPNE1-209ENST00000415920 GM2AP17900 193 aa13.54□□□□□ -0.24
CPNE1-209ENST00000415920 PGAM1P18669 254 aa13.54□□□□□ -0.24
CPNE1-209ENST00000415920 TNFRSF8P28908 595 aa13.54□□□□□ -0.24
CPNE1-209ENST00000415920 SPAM1P38567 509 aa13.54□□□□□ -0.24
CPNE1-209ENST00000415920 ELK3P41970 407 aa13.54□□□□□ -0.24
CPNE1-209ENST00000415920 SPINT3P49223 89 aa13.54□□□□□ -0.24
CPNE1-209ENST00000415920 VSNL1P62760 191 aa13.54□□□□□ -0.24
CPNE1-209ENST00000415920 PTSQ03393 145 aa13.54□□□□□ -0.24
CPNE1-209ENST00000415920 SGCGQ13326 291 aa13.54□□□□□ -0.24
CPNE1-209ENST00000415920 FGL2Q14314 439 aa13.54□□□□□ -0.24
CPNE1-209ENST00000415920 NAA30Q147X3 362 aaPredicted RBP13.54□□□□□ -0.24
CPNE1-209ENST00000415920 IRF4Q15306 451 aa13.54□□□□□ -0.24
CPNE1-209ENST00000415920 ZNF284Q2VY69 593 aa13.54□□□□□ -0.24
CPNE1-209ENST00000415920 RAET1GQ6H3X3 334 aa13.54□□□□□ -0.24
CPNE1-209ENST00000415920 FAM151BQ6UXP7 276 aa13.54□□□□□ -0.24
CPNE1-209ENST00000415920 GALNT15Q8N3T1 639 aa13.54□□□□□ -0.24
CPNE1-209ENST00000415920 FBXO36Q8NEA4 188 aa13.54□□□□□ -0.24
CPNE1-209ENST00000415920 STYXQ8WUJ0 223 aa13.54□□□□□ -0.24
CPNE1-209ENST00000415920 PTCD2Q8WV60 388 aaKnown RBP13.54□□□□□ -0.24
CPNE1-209ENST00000415920 EID2BQ96D98 161 aa13.54□□□□□ -0.24
CPNE1-209ENST00000415920 ZNF778Q96MU6 729 aa13.54□□□□□ -0.24
CPNE1-209ENST00000415920 DCBLD2Q96PD2 775 aa13.54□□□□□ -0.24
CPNE1-209ENST00000415920 WDR83Q9BRX9 315 aaKnown RBP13.54□□□□□ -0.24
CPNE1-209ENST00000415920 SLC17A9Q9BYT1 436 aa13.54□□□□□ -0.24
CPNE1-209ENST00000415920 FOXP3Q9BZS1 431 aa13.54□□□□□ -0.24
CPNE1-209ENST00000415920 MRM3Q9HC36 420 aaKnown RBP13.54□□□□□ -0.24
CPNE1-209ENST00000415920 IL17CQ9P0M4 197 aa13.54□□□□□ -0.24
CPNE1-209ENST00000415920 FTSJ1Q9UET6 329 aa13.54□□□□□ -0.24
CPNE1-209ENST00000415920 SLC2A6Q9UGQ3 507 aa13.54□□□□□ -0.24
CPNE1-209ENST00000415920 A0A087WV48 116 aa13.53□□□□□ -0.24
CPNE1-209ENST00000415920 GLYATL1P3A0A0U1RQE8 302 aa13.53□□□□□ -0.24
CPNE1-209ENST00000415920 A0A1W2PPC4 97 aa13.53□□□□□ -0.24
CPNE1-209ENST00000415920 MROH6A6NGR9 719 aa13.53□□□□□ -0.24
CPNE1-209ENST00000415920 E7ESA3 106 aa13.53□□□□□ -0.24
CPNE1-209ENST00000415920 VILLO15195 856 aa13.53□□□□□ -0.24
CPNE1-209ENST00000415920 EIF3HO15372 352 aaKnown RBP eCLIP13.53□□□□□ -0.24
CPNE1-209ENST00000415920 PRAMEF1O95521 474 aa13.53□□□□□ -0.24
CPNE1-209ENST00000415920 MYBL2P10244 700 aa13.53□□□□□ -0.24
CPNE1-209ENST00000415920 HNRNPA2B1P22626 353 aaKnown RBP13.53□□□□□ -0.24
CPNE1-209ENST00000415920 MCM3P25205 808 aa13.53□□□□□ -0.24
CPNE1-209ENST00000415920 ITPKBP27987 946 aa13.53□□□□□ -0.24
CPNE1-209ENST00000415920 NMBRP28336 390 aa13.53□□□□□ -0.24
CPNE1-209ENST00000415920 HADHAP40939 763 aa13.53□□□□□ -0.24
CPNE1-209ENST00000415920 CCR5P51681 352 aa13.53□□□□□ -0.24
CPNE1-209ENST00000415920 RACK1P63244 317 aaKnown RBP13.53□□□□□ -0.24
CPNE1-209ENST00000415920 PRAMEP78395 509 aa13.53□□□□□ -0.24
CPNE1-209ENST00000415920 CEP128Q6ZU80 1094 aa13.53□□□□□ -0.24
CPNE1-209ENST00000415920 MICALCLQ6ZW33 695 aa13.53□□□□□ -0.24
CPNE1-209ENST00000415920 NLRP9Q7RTR0 991 aa13.53□□□□□ -0.24
CPNE1-209ENST00000415920 OTUD6BQ8N6M0 293 aa13.53□□□□□ -0.24
CPNE1-209ENST00000415920 GPR26Q8NDV2 337 aa13.53□□□□□ -0.24
CPNE1-209ENST00000415920 SCAMP4Q969E2 229 aa13.53□□□□□ -0.24
CPNE1-209ENST00000415920 AP2M1Q96CW1 435 aa13.53□□□□□ -0.24
CPNE1-209ENST00000415920 LRRC39Q96DD0 335 aa13.53□□□□□ -0.24
CPNE1-209ENST00000415920 MFSD3Q96ES6 412 aa13.53□□□□□ -0.24
CPNE1-209ENST00000415920 SIGLEC10Q96LC7 697 aa13.53□□□□□ -0.24
CPNE1-209ENST00000415920 C9orf72Q96LT7 481 aa13.53□□□□□ -0.24
CPNE1-209ENST00000415920 EBNA1BP2Q99848 306 aaKnown RBP13.53□□□□□ -0.24
CPNE1-209ENST00000415920 KIFC1Q9BW19 673 aa13.53□□□□□ -0.24
CPNE1-209ENST00000415920 PHACTR1Q9C0D0 580 aa13.53□□□□□ -0.24
CPNE1-209ENST00000415920 CAAP1Q9H8G2 361 aa13.53□□□□□ -0.24
CPNE1-209ENST00000415920 RAD18Q9NS91 495 aa13.53□□□□□ -0.24
CPNE1-209ENST00000415920 ZC3H7BQ9UGR2 993 aaKnown RBP13.53□□□□□ -0.24
CPNE1-209ENST00000415920 RPS6KL1Q9Y6S9 549 aa13.53□□□□□ -0.24
CPNE1-209ENST00000415920 FAM237BA0A1B0GVD1 139 aa13.52□□□□□ -0.25
CPNE1-209ENST00000415920 A0A1W2PR77 199 aa13.52□□□□□ -0.25
CPNE1-209ENST00000415920 GPR39O43194 453 aa13.52□□□□□ -0.25
CPNE1-209ENST00000415920 LATO43561 262 aa13.52□□□□□ -0.25
CPNE1-209ENST00000415920 TLX3O43711 291 aaPredicted RBP13.52□□□□□ -0.25
CPNE1-209ENST00000415920 PAK4O96013 591 aaPredicted RBP13.52□□□□□ -0.25
CPNE1-209ENST00000415920 PAMP19021 973 aa13.52□□□□□ -0.25
CPNE1-209ENST00000415920 AKT2P31751 481 aa13.52□□□□□ -0.25
CPNE1-209ENST00000415920 MC4RP32245 332 aa13.52□□□□□ -0.25
CPNE1-209ENST00000415920 IGFALSP35858 605 aa13.52□□□□□ -0.25
CPNE1-209ENST00000415920 ARSDP51689 593 aa13.52□□□□□ -0.25
CPNE1-209ENST00000415920 C21orf59P57076 290 aa13.52□□□□□ -0.25
CPNE1-209ENST00000415920 DCDC1P59894 354 aa13.52□□□□□ -0.25
CPNE1-209ENST00000415920 CRYMQ14894 314 aa13.52□□□□□ -0.25
CPNE1-209ENST00000415920 LRRC14Q15048 493 aa13.52□□□□□ -0.25
CPNE1-209ENST00000415920 SKIDA1Q1XH10 827 aa13.52□□□□□ -0.25
CPNE1-209ENST00000415920 ESRP1Q6NXG1 681 aaKnown RBP13.52□□□□□ -0.25
CPNE1-209ENST00000415920 AFTPHQ6ULP2 937 aa13.52□□□□□ -0.25
CPNE1-209ENST00000415920 KDM7AQ6ZMT4 941 aa13.52□□□□□ -0.25
CPNE1-209ENST00000415920 PTAR1Q7Z6K3 402 aaPredicted RBP13.52□□□□□ -0.25
CPNE1-209ENST00000415920 TECPR1Q7Z6L1 1165 aa13.52□□□□□ -0.25
CPNE1-209ENST00000415920 IGDCC3Q8IVU1 814 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms