RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 UGT2A3Q6UWM9 527 aa11.52□□□□□ -0.56
RFFL-205ENST00000415395 GET4Q7L5D6 327 aaPredicted RBP11.52□□□□□ -0.56
RFFL-205ENST00000415395 C2CD4AQ8NCU7 369 aaPredicted RBP11.52□□□□□ -0.56
RFFL-205ENST00000415395 HIPK4Q8NE63 616 aa11.52□□□□□ -0.56
RFFL-205ENST00000415395 OR13J1Q8NGT2 312 aa11.52□□□□□ -0.56
RFFL-205ENST00000415395 RMDN1Q96DB5 314 aa11.52□□□□□ -0.56
RFFL-205ENST00000415395 NSMCE3Q96MG7 304 aa11.52□□□□□ -0.56
RFFL-205ENST00000415395 MFSD1Q9H3U5 465 aa11.52□□□□□ -0.56
RFFL-205ENST00000415395 RHOJQ9H4E5 214 aa11.52□□□□□ -0.56
RFFL-205ENST00000415395 ATP13A3Q9H7F0 1226 aa11.52□□□□□ -0.56
RFFL-205ENST00000415395 CNOT11Q9UKZ1 510 aaKnown RBP11.52□□□□□ -0.56
RFFL-205ENST00000415395 TMCO1Q9UM00 188 aa11.52□□□□□ -0.56
RFFL-205ENST00000415395 PADI4Q9UM07 663 aa11.52□□□□□ -0.56
RFFL-205ENST00000415395 SLC27A6Q9Y2P4 619 aa11.52□□□□□ -0.56
RFFL-205ENST00000415395 DOCK8Q8NF50 2099 aa11.52□□□□□ -0.56
RFFL-205ENST00000415395 PDE4DIPQ5VU43 2346 aa11.52□□□□□ -0.57
RFFL-205ENST00000415395 A0A1W2PQ67 120 aa11.52□□□□□ -0.57
RFFL-205ENST00000415395 H3BNX3 289 aa11.52□□□□□ -0.57
RFFL-205ENST00000415395 AIM2O14862 343 aa11.52□□□□□ -0.57
RFFL-205ENST00000415395 HTRA2O43464 458 aaPredicted RBP11.52□□□□□ -0.57
RFFL-205ENST00000415395 CLPTM1O96005 669 aa11.52□□□□□ -0.57
RFFL-205ENST00000415395 ASLP04424 464 aa11.52□□□□□ -0.57
RFFL-205ENST00000415395 C2P06681 752 aa11.52□□□□□ -0.57
RFFL-205ENST00000415395 POLR2EP19388 210 aaKnown RBP11.52□□□□□ -0.57
RFFL-205ENST00000415395 ERFP50548 548 aa11.52□□□□□ -0.57
RFFL-205ENST00000415395 PRAMEP78395 509 aa11.52□□□□□ -0.57
RFFL-205ENST00000415395 BCL2L1Q07817 233 aa11.52□□□□□ -0.57
RFFL-205ENST00000415395 SLC9B1Q4ZJI4 515 aa11.52□□□□□ -0.57
RFFL-205ENST00000415395 ATAT1Q5SQI0 421 aa11.52□□□□□ -0.57
RFFL-205ENST00000415395 VWA5B1Q5TIE3 1220 aa11.52□□□□□ -0.57
RFFL-205ENST00000415395 ASTLQ6HA08 431 aaPredicted RBP11.52□□□□□ -0.57
RFFL-205ENST00000415395 CES5AQ6NT32 575 aa11.52□□□□□ -0.57
RFFL-205ENST00000415395 NEPROQ6NW34 567 aa11.52□□□□□ -0.57
RFFL-205ENST00000415395 C22orf39Q6P5X5 142 aa11.52□□□□□ -0.57
RFFL-205ENST00000415395 CMC1Q7Z7K0 106 aa11.52□□□□□ -0.57
RFFL-205ENST00000415395 ADIPOR2Q86V24 386 aa11.52□□□□□ -0.57
RFFL-205ENST00000415395 SPATA24Q86W54 205 aa11.52□□□□□ -0.57
RFFL-205ENST00000415395 SNX32Q86XE0 403 aa11.52□□□□□ -0.57
RFFL-205ENST00000415395 PHTF2Q8N3S3 785 aa11.52□□□□□ -0.57
RFFL-205ENST00000415395 BLOC1S5Q8TDH9 187 aa11.52□□□□□ -0.57
RFFL-205ENST00000415395 GFM2Q969S9 779 aaKnown RBP11.52□□□□□ -0.57
RFFL-205ENST00000415395 RSPRY1Q96DX4 576 aa11.52□□□□□ -0.57
RFFL-205ENST00000415395 MYO19Q96H55 970 aa11.52□□□□□ -0.57
RFFL-205ENST00000415395 VPS39Q96JC1 886 aa11.52□□□□□ -0.57
RFFL-205ENST00000415395 SCYL1Q96KG9 808 aa11.52□□□□□ -0.57
RFFL-205ENST00000415395 LRRC3BQ96PB8 259 aa11.52□□□□□ -0.57
RFFL-205ENST00000415395 LENG8Q96PV6 779 aaPredicted RBP11.52□□□□□ -0.57
RFFL-205ENST00000415395 AGAP2Q99490 1192 aa11.52□□□□□ -0.57
RFFL-205ENST00000415395 GPR22Q99680 433 aa11.52□□□□□ -0.57
RFFL-205ENST00000415395 HAUS8Q9BT25 410 aa11.52□□□□□ -0.57
RFFL-205ENST00000415395 CPEB1Q9BZB8 566 aaKnown RBP11.52□□□□□ -0.57
RFFL-205ENST00000415395 ZFP14Q9HCL3 533 aa11.52□□□□□ -0.57
RFFL-205ENST00000415395 SLC17A6Q9P2U8 582 aa11.52□□□□□ -0.57
RFFL-205ENST00000415395 SLC2A6Q9UGQ3 507 aa11.52□□□□□ -0.57
RFFL-205ENST00000415395 PCDHGC4Q9Y5F7 938 aa11.52□□□□□ -0.57
RFFL-205ENST00000415395 MYO9BQ13459 2157 aa11.51□□□□□ -0.57
RFFL-205ENST00000415395 TMEM265A0A087WTH1 108 aa11.51□□□□□ -0.57
RFFL-205ENST00000415395 C2orf81A6NN90 581 aa11.51□□□□□ -0.57
RFFL-205ENST00000415395 HEPACAM2A8MVW5 462 aa11.51□□□□□ -0.57
RFFL-205ENST00000415395 K7ERQ8 282 aa11.51□□□□□ -0.57
RFFL-205ENST00000415395 SMAD6O43541 496 aaKnown RBP11.51□□□□□ -0.57
RFFL-205ENST00000415395 ZBTB14O43829 449 aa11.51□□□□□ -0.57
RFFL-205ENST00000415395 NPHS1O60500 1241 aa11.51□□□□□ -0.57
RFFL-205ENST00000415395 ZNF821O75541 412 aaPredicted RBP11.51□□□□□ -0.57
RFFL-205ENST00000415395 RPP40O75818 363 aaKnown RBP11.51□□□□□ -0.57
RFFL-205ENST00000415395 PGLSO95336 258 aa11.51□□□□□ -0.57
RFFL-205ENST00000415395 SRPRAP08240 638 aaKnown RBP11.51□□□□□ -0.57
RFFL-205ENST00000415395 FCARP24071 287 aa11.51□□□□□ -0.57
RFFL-205ENST00000415395 SERPINA4P29622 427 aa11.51□□□□□ -0.57
RFFL-205ENST00000415395 VIPR2P41587 438 aa11.51□□□□□ -0.57
RFFL-205ENST00000415395 DGKGP49619 791 aa11.51□□□□□ -0.57
RFFL-205ENST00000415395 ZNF140P52738 457 aaPredicted RBP11.51□□□□□ -0.57
RFFL-205ENST00000415395 RAD51Q06609 339 aa11.51□□□□□ -0.57
RFFL-205ENST00000415395 DLG1Q12959 904 aa11.51□□□□□ -0.57
RFFL-205ENST00000415395 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.51□□□□□ -0.57
RFFL-205ENST00000415395 ATXN7L2Q5T6C5 722 aaPredicted RBP11.51□□□□□ -0.57
RFFL-205ENST00000415395 GLT6D1Q7Z4J2 308 aa11.51□□□□□ -0.57
RFFL-205ENST00000415395 ZC3HC1Q86WB0 502 aaKnown RBP11.51□□□□□ -0.57
RFFL-205ENST00000415395 RNF135Q8IUD6 432 aa11.51□□□□□ -0.57
RFFL-205ENST00000415395 DSELQ8IZU8 1212 aa11.51□□□□□ -0.57
RFFL-205ENST00000415395 LPCAT1Q8NF37 534 aa11.51□□□□□ -0.57
RFFL-205ENST00000415395 GPR150Q8NGU9 434 aa11.51□□□□□ -0.57
RFFL-205ENST00000415395 LZICQ8WZA0 190 aa11.51□□□□□ -0.57
RFFL-205ENST00000415395 CCDC126Q96EE4 140 aa11.51□□□□□ -0.57
RFFL-205ENST00000415395 RIPOR3Q96MK2 946 aa11.51□□□□□ -0.57
RFFL-205ENST00000415395 NDNQ99608 321 aa11.51□□□□□ -0.57
RFFL-205ENST00000415395 FAM83CQ9BQN1 747 aa11.51□□□□□ -0.57
RFFL-205ENST00000415395 GATA5Q9BWX5 397 aaPredicted RBP11.51□□□□□ -0.57
RFFL-205ENST00000415395 SHCBP1LQ9BZQ2 653 aa11.51□□□□□ -0.57
RFFL-205ENST00000415395 TM6SF2Q9BZW4 377 aa11.51□□□□□ -0.57
RFFL-205ENST00000415395 ZNF576Q9H609 170 aa11.51□□□□□ -0.57
RFFL-205ENST00000415395 ZNF696Q9H7X3 374 aa11.51□□□□□ -0.57
RFFL-205ENST00000415395 MAGEE1Q9HCI5 957 aa11.51□□□□□ -0.57
RFFL-205ENST00000415395 NLE1Q9NVX2 485 aaPredicted RBP11.51□□□□□ -0.57
RFFL-205ENST00000415395 UTP6Q9NYH9 597 aaKnown RBP11.51□□□□□ -0.57
RFFL-205ENST00000415395 ATXN10Q9UBB4 475 aa11.51□□□□□ -0.57
RFFL-205ENST00000415395 SLC8A2Q9UPR5 921 aa11.51□□□□□ -0.57
RFFL-205ENST00000415395 ZNF106Q9H2Y7 1883 aaKnown RBP11.5□□□□□ -0.57
RFFL-205ENST00000415395 LINC01565O15544 149 aa11.5□□□□□ -0.57
RFFL-205ENST00000415395 CISD3P0C7P0 127 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms