RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 ALDH3A1P30838 453 aa15.43■□□□□ 0.06
SHMT2-202ENST00000414700 FOXN2P32314 431 aa15.43■□□□□ 0.06
SHMT2-202ENST00000414700 SPINT3P49223 89 aa15.43■□□□□ 0.06
SHMT2-202ENST00000414700 HSF5Q4G112 596 aaPredicted RBP15.43■□□□□ 0.06
SHMT2-202ENST00000414700 ACVR1CQ8NER5 493 aa15.43■□□□□ 0.06
SHMT2-202ENST00000414700 HMGB4Q8WW32 186 aa15.43■□□□□ 0.06
SHMT2-202ENST00000414700 CCDC97Q96F63 343 aaPredicted RBP15.43■□□□□ 0.06
SHMT2-202ENST00000414700 SIPA1Q96FS4 1042 aa15.43■□□□□ 0.06
SHMT2-202ENST00000414700 OMDQ99983 421 aa15.43■□□□□ 0.06
SHMT2-202ENST00000414700 MCMBPQ9BTE3 642 aa15.43■□□□□ 0.06
SHMT2-202ENST00000414700 FBXO6Q9NRD1 293 aaPredicted RBP15.43■□□□□ 0.06
SHMT2-202ENST00000414700 CATSPERZQ9NTU4 200 aa15.43■□□□□ 0.06
SHMT2-202ENST00000414700 TXLNGQ9NUQ3 528 aa15.43■□□□□ 0.06
SHMT2-202ENST00000414700 LGALS13Q9UHV8 139 aa15.43■□□□□ 0.06
SHMT2-202ENST00000414700 FBXO5Q9UKT4 447 aa15.43■□□□□ 0.06
SHMT2-202ENST00000414700 TRIM33Q9UPN9 1127 aa15.43■□□□□ 0.06
SHMT2-202ENST00000414700 IKBKGQ9Y6K9 419 aa15.43■□□□□ 0.06
SHMT2-202ENST00000414700 CACNA1IQ9P0X4 2223 aa15.43■□□□□ 0.06
SHMT2-202ENST00000414700 DMDP11532 3685 aa15.43■□□□□ 0.06
SHMT2-202ENST00000414700 MMP20O60882 483 aa15.43■□□□□ 0.06
SHMT2-202ENST00000414700 HAUS5O94927 633 aa15.43■□□□□ 0.06
SHMT2-202ENST00000414700 PDGFBP01127 241 aaPredicted RBP15.43■□□□□ 0.06
SHMT2-202ENST00000414700 UGT1A6P19224 532 aa15.43■□□□□ 0.06
SHMT2-202ENST00000414700 UGT1A1P22309 533 aa15.43■□□□□ 0.06
SHMT2-202ENST00000414700 UGT1A4P22310 534 aa15.43■□□□□ 0.06
SHMT2-202ENST00000414700 CALB2P22676 271 aa15.43■□□□□ 0.06
SHMT2-202ENST00000414700 UGT1A3P35503 534 aa15.43■□□□□ 0.06
SHMT2-202ENST00000414700 UGT1A5P35504 534 aa15.43■□□□□ 0.06
SHMT2-202ENST00000414700 ELP6Q0PNE2 266 aa15.43■□□□□ 0.06
SHMT2-202ENST00000414700 MROH9Q5TGP6 573 aa15.43■□□□□ 0.06
SHMT2-202ENST00000414700 AFTPHQ6ULP2 937 aa15.43■□□□□ 0.06
SHMT2-202ENST00000414700 SYT13Q7L8C5 426 aa15.43■□□□□ 0.06
SHMT2-202ENST00000414700 SPNS2Q8IVW8 549 aa15.43■□□□□ 0.06
SHMT2-202ENST00000414700 FITM2Q8N6M3 262 aa15.43■□□□□ 0.06
SHMT2-202ENST00000414700 C2CD4AQ8NCU7 369 aaPredicted RBP15.43■□□□□ 0.06
SHMT2-202ENST00000414700 PJA1Q8NG27 643 aa15.43■□□□□ 0.06
SHMT2-202ENST00000414700 GANCQ8TET4 914 aa15.43■□□□□ 0.06
SHMT2-202ENST00000414700 MZB1Q8WU39 189 aa15.43■□□□□ 0.06
SHMT2-202ENST00000414700 PIKFYVEQ9Y2I7 2098 aa15.42■□□□□ 0.06
SHMT2-202ENST00000414700 GON4LQ3T8J9 2241 aa15.42■□□□□ 0.06
SHMT2-202ENST00000414700 GLYATL1P3A0A0U1RQE8 302 aa15.42■□□□□ 0.06
SHMT2-202ENST00000414700 A0A1W2PPM1 405 aa15.42■□□□□ 0.06
SHMT2-202ENST00000414700 SRP72O76094 671 aaKnown RBP15.42■□□□□ 0.06
SHMT2-202ENST00000414700 UNC5CO95185 931 aa15.42■□□□□ 0.06
SHMT2-202ENST00000414700 C6P13671 934 aa15.42■□□□□ 0.06
SHMT2-202ENST00000414700 CREB1P16220 341 aa15.42■□□□□ 0.06
SHMT2-202ENST00000414700 GP5P40197 560 aa15.42■□□□□ 0.06
SHMT2-202ENST00000414700 PGGT1BP53609 377 aa15.42■□□□□ 0.06
SHMT2-202ENST00000414700 LRRC32Q14392 662 aa15.42■□□□□ 0.06
SHMT2-202ENST00000414700 CHRNA6Q15825 494 aa15.42■□□□□ 0.06
SHMT2-202ENST00000414700 ZRANB3Q5FWF4 1079 aa15.42■□□□□ 0.06
SHMT2-202ENST00000414700 CNSTQ6PJW8 725 aa15.42■□□□□ 0.06
SHMT2-202ENST00000414700 KIAA1324Q6UXG2 1013 aaKnown RBP15.42■□□□□ 0.06
SHMT2-202ENST00000414700 FAM124AQ86V42 546 aa15.42■□□□□ 0.06
SHMT2-202ENST00000414700 PELI3Q8N2H9 469 aa15.42■□□□□ 0.06
SHMT2-202ENST00000414700 SYNPOQ8N3V7 929 aa15.42■□□□□ 0.06
SHMT2-202ENST00000414700 NAT14Q8WUY8 206 aa15.42■□□□□ 0.06
SHMT2-202ENST00000414700 CPNE1Q99829 537 aa15.42■□□□□ 0.06
SHMT2-202ENST00000414700 ABCG8Q9H221 673 aa15.42■□□□□ 0.06
SHMT2-202ENST00000414700 FBRSQ9HAH7 460 aa15.42■□□□□ 0.06
SHMT2-202ENST00000414700 LAMA1P25391 3075 aa15.42■□□□□ 0.06
SHMT2-202ENST00000414700 PRR23AA6NEV1 266 aa15.41■□□□□ 0.06
SHMT2-202ENST00000414700 CHURC1-FNTBB4DL54 471 aa15.41■□□□□ 0.06
SHMT2-202ENST00000414700 DCNP07585 359 aaKnown RBP15.41■□□□□ 0.06
SHMT2-202ENST00000414700 ACADSP16219 412 aa15.41■□□□□ 0.06
SHMT2-202ENST00000414700 NFKBIAP25963 317 aa15.41■□□□□ 0.06
SHMT2-202ENST00000414700 SPAM1P38567 509 aa15.41■□□□□ 0.06
SHMT2-202ENST00000414700 ZXDAP98168 799 aa15.41■□□□□ 0.06
SHMT2-202ENST00000414700 ACOX1Q15067 660 aa15.41■□□□□ 0.06
SHMT2-202ENST00000414700 TSNAXIP1Q2TAA8 658 aa15.41■□□□□ 0.06
SHMT2-202ENST00000414700 FASTKD1Q53R41 847 aaKnown RBP15.41■□□□□ 0.06
SHMT2-202ENST00000414700 TECPR1Q7Z6L1 1165 aa15.41■□□□□ 0.06
SHMT2-202ENST00000414700 ZC3HC1Q86WB0 502 aaKnown RBP15.41■□□□□ 0.06
SHMT2-202ENST00000414700 HHIPQ96QV1 700 aa15.41■□□□□ 0.06
SHMT2-202ENST00000414700 RBBP8Q99708 897 aa15.41■□□□□ 0.06
SHMT2-202ENST00000414700 TXNDC16Q9P2K2 825 aa15.41■□□□□ 0.06
SHMT2-202ENST00000414700 NKX1-2Q9UD57 310 aaPredicted RBP15.41■□□□□ 0.06
SHMT2-202ENST00000414700 ZNF180Q9UJW8 692 aa15.41■□□□□ 0.06
SHMT2-202ENST00000414700 CRYL1Q9Y2S2 319 aa15.41■□□□□ 0.06
SHMT2-202ENST00000414700 H0Y858 1186 aa15.41■□□□□ 0.06
SHMT2-202ENST00000414700 PEX11AO75192 247 aa15.41■□□□□ 0.06
SHMT2-202ENST00000414700 ATP5HO75947 161 aa15.41■□□□□ 0.06
SHMT2-202ENST00000414700 S1PR4O95977 384 aa15.41■□□□□ 0.06
SHMT2-202ENST00000414700 ITGA2BP08514 1039 aa15.41■□□□□ 0.06
SHMT2-202ENST00000414700 NFATC2Q13469 925 aa15.41■□□□□ 0.06
SHMT2-202ENST00000414700 NAB1Q13506 487 aa15.41■□□□□ 0.06
SHMT2-202ENST00000414700 RASA2Q15283 850 aa15.41■□□□□ 0.06
SHMT2-202ENST00000414700 TMEM52BQ4KMG9 183 aa15.41■□□□□ 0.06
SHMT2-202ENST00000414700 ATP13A5Q4VNC0 1218 aa15.41■□□□□ 0.06
SHMT2-202ENST00000414700 EXOC3L1Q86VI1 746 aa15.41■□□□□ 0.06
SHMT2-202ENST00000414700 RIBC1Q8N443 379 aaPredicted RBP15.41■□□□□ 0.06
SHMT2-202ENST00000414700 GPR150Q8NGU9 434 aa15.41■□□□□ 0.06
SHMT2-202ENST00000414700 OR14C36Q8NHC7 312 aa15.41■□□□□ 0.06
SHMT2-202ENST00000414700 CALML6Q8TD86 181 aa15.41■□□□□ 0.06
SHMT2-202ENST00000414700 CKAP2Q8WWK9 683 aa15.41■□□□□ 0.06
SHMT2-202ENST00000414700 RAB7BQ96AH8 199 aa15.41■□□□□ 0.06
SHMT2-202ENST00000414700 FAM131CQ96AQ9 280 aa15.41■□□□□ 0.06
SHMT2-202ENST00000414700 COQ10AQ96MF6 247 aa15.41■□□□□ 0.06
SHMT2-202ENST00000414700 NELL2Q99435 816 aa15.41■□□□□ 0.06
SHMT2-202ENST00000414700 OSBPL6Q9BZF3 934 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms