RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 CES4AQ5XG92 561 aa17.07■□□□□ 0.32
PTPRC-206ENST00000413409 ZNF470Q6ECI4 717 aa17.07■□□□□ 0.32
PTPRC-206ENST00000413409 NEPROQ6NW34 567 aa17.07■□□□□ 0.32
PTPRC-206ENST00000413409 FAM217AQ8IXS0 508 aa17.07■□□□□ 0.32
PTPRC-206ENST00000413409 HJURPQ8NCD3 748 aaPredicted RBP17.07■□□□□ 0.32
PTPRC-206ENST00000413409 OR7D4Q8NG98 312 aa17.07■□□□□ 0.32
PTPRC-206ENST00000413409 PPP1R14CQ8TAE6 165 aa17.07■□□□□ 0.32
PTPRC-206ENST00000413409 IFT43Q96FT9 208 aa17.07■□□□□ 0.32
PTPRC-206ENST00000413409 ATXN7L3BQ96GX2 97 aa17.07■□□□□ 0.32
PTPRC-206ENST00000413409 TSNARE1Q96NA8 513 aa17.07■□□□□ 0.32
PTPRC-206ENST00000413409 CINPQ9BW66 212 aaPredicted RBP17.07■□□□□ 0.32
PTPRC-206ENST00000413409 FAM96AQ9H5X1 160 aa17.07■□□□□ 0.32
PTPRC-206ENST00000413409 STN1Q9H668 368 aaKnown RBP17.07■□□□□ 0.32
PTPRC-206ENST00000413409 KCNK13Q9HB14 408 aa17.07■□□□□ 0.32
PTPRC-206ENST00000413409 SLC40A1Q9NP59 571 aa17.07■□□□□ 0.32
PTPRC-206ENST00000413409 ZFP69BQ9UJL9 534 aa17.07■□□□□ 0.32
PTPRC-206ENST00000413409 DCTN4Q9UJW0 460 aa17.07■□□□□ 0.32
PTPRC-206ENST00000413409 TLK1Q9UKI8 766 aa17.07■□□□□ 0.32
PTPRC-206ENST00000413409 FBXO5Q9UKT4 447 aa17.07■□□□□ 0.32
PTPRC-206ENST00000413409 A0A0D9SEW6 157 aa17.06■□□□□ 0.32
PTPRC-206ENST00000413409 A0A0G2JND7 137 aa17.06■□□□□ 0.32
PTPRC-206ENST00000413409 TCRBV21S2A2A0A5A6 115 aa17.06■□□□□ 0.32
PTPRC-206ENST00000413409 CCDC78A2IDD5 438 aa17.06■□□□□ 0.32
PTPRC-206ENST00000413409 J3QKU1 62 aa17.06■□□□□ 0.32
PTPRC-206ENST00000413409 GFRA2O00451 464 aa17.06■□□□□ 0.32
PTPRC-206ENST00000413409 MUSKO15146 869 aa17.06■□□□□ 0.32
PTPRC-206ENST00000413409 DKK1O94907 266 aa17.06■□□□□ 0.32
PTPRC-206ENST00000413409 NDST3O95803 873 aa17.06■□□□□ 0.32
PTPRC-206ENST00000413409 AHSGP02765 367 aa17.06■□□□□ 0.32
PTPRC-206ENST00000413409 SYPP08247 313 aa17.06■□□□□ 0.32
PTPRC-206ENST00000413409 GABRB3P28472 473 aa17.06■□□□□ 0.32
PTPRC-206ENST00000413409 KIR2DL1P43626 348 aaPredicted RBP17.06■□□□□ 0.32
PTPRC-206ENST00000413409 ABCG1P45844 678 aa17.06■□□□□ 0.32
PTPRC-206ENST00000413409 MPP1Q00013 466 aa17.06■□□□□ 0.32
PTPRC-206ENST00000413409 SLC12A1Q13621 1099 aa17.06■□□□□ 0.32
PTPRC-206ENST00000413409 USP10Q14694 798 aaKnown RBP17.06■□□□□ 0.32
PTPRC-206ENST00000413409 CXorf57Q6NSI4 855 aaKnown RBP17.06■□□□□ 0.32
PTPRC-206ENST00000413409 ASRGL1Q7L266 308 aa17.06■□□□□ 0.32
PTPRC-206ENST00000413409 PGBD3Q8N328 593 aa17.06■□□□□ 0.32
PTPRC-206ENST00000413409 OR13J1Q8NGT2 312 aa17.06■□□□□ 0.32
PTPRC-206ENST00000413409 OR6Y1Q8NGX8 325 aa17.06■□□□□ 0.32
PTPRC-206ENST00000413409 SH3RF2Q8TEC5 729 aa17.06■□□□□ 0.32
PTPRC-206ENST00000413409 DCBLD2Q96PD2 775 aa17.06■□□□□ 0.32
PTPRC-206ENST00000413409 TRIB3Q96RU7 358 aa17.06■□□□□ 0.32
PTPRC-206ENST00000413409 RNF38Q9H0F5 515 aa17.06■□□□□ 0.32
PTPRC-206ENST00000413409 WWP1Q9H0M0 922 aa17.06■□□□□ 0.32
PTPRC-206ENST00000413409 SLC39A10Q9ULF5 831 aa17.06■□□□□ 0.32
PTPRC-206ENST00000413409 A0A087X1B8 175 aa17.05■□□□□ 0.32
PTPRC-206ENST00000413409 FAM95CA0A1B0GW59 222 aa17.05■□□□□ 0.32
PTPRC-206ENST00000413409 TMEM114B3SHH9 223 aa17.05■□□□□ 0.32
PTPRC-206ENST00000413409 GOLGA8TH3BQL2 631 aa17.05■□□□□ 0.32
PTPRC-206ENST00000413409 ABCB7O75027 752 aa17.05■□□□□ 0.32
PTPRC-206ENST00000413409 SLC35E2BP0CK96 405 aa17.05■□□□□ 0.32
PTPRC-206ENST00000413409 IRF1P10914 325 aa17.05■□□□□ 0.32
PTPRC-206ENST00000413409 CPA3P15088 417 aa17.05■□□□□ 0.32
PTPRC-206ENST00000413409 PFKLP17858 780 aa17.05■□□□□ 0.32
PTPRC-206ENST00000413409 CR2P20023 1033 aa17.05■□□□□ 0.32
PTPRC-206ENST00000413409 SGSHP51688 502 aa17.05■□□□□ 0.32
PTPRC-206ENST00000413409 KPNA2P52292 529 aaKnown RBP17.05■□□□□ 0.32
PTPRC-206ENST00000413409 RAB10P61026 200 aa17.05■□□□□ 0.32
PTPRC-206ENST00000413409 ZXDBP98169 803 aa17.05■□□□□ 0.32
PTPRC-206ENST00000413409 POU4F1Q01851 419 aa17.05■□□□□ 0.32
PTPRC-206ENST00000413409 TSNAXIP1Q2TAA8 658 aa17.05■□□□□ 0.32
PTPRC-206ENST00000413409 Q6ZNB5 142 aa17.05■□□□□ 0.32
PTPRC-206ENST00000413409 RABEPKQ7Z6M1 372 aa17.05■□□□□ 0.32
PTPRC-206ENST00000413409 CLNKQ7Z7G1 428 aa17.05■□□□□ 0.32
PTPRC-206ENST00000413409 C10orf107Q8IVU9 208 aa17.05■□□□□ 0.32
PTPRC-206ENST00000413409 DENND6AQ8IWF6 608 aa17.05■□□□□ 0.32
PTPRC-206ENST00000413409 PLD6Q8N2A8 252 aaKnown RBP17.05■□□□□ 0.32
PTPRC-206ENST00000413409 OR52K2Q8NGK3 314 aa17.05■□□□□ 0.32
PTPRC-206ENST00000413409 TUBB6Q9BUF5 446 aa17.05■□□□□ 0.32
PTPRC-206ENST00000413409 LRMDAQ9H2I8 198 aa17.05■□□□□ 0.32
PTPRC-206ENST00000413409 CAB39LQ9H9S4 337 aa17.05■□□□□ 0.32
PTPRC-206ENST00000413409 NMRAL1Q9HBL8 299 aa17.05■□□□□ 0.32
PTPRC-206ENST00000413409 TRPC7Q9HCX4 862 aa17.05■□□□□ 0.32
PTPRC-206ENST00000413409 CORO1CQ9ULV4 474 aaPredicted RBP17.05■□□□□ 0.32
PTPRC-206ENST00000413409 PIEZO2Q9H5I5 2752 aa17.04■□□□□ 0.32
PTPRC-206ENST00000413409 TYW5A2RUC4 315 aaKnown RBP17.04■□□□□ 0.32
PTPRC-206ENST00000413409 FAM149AA5PLN7 773 aa17.04■□□□□ 0.32
PTPRC-206ENST00000413409 LDB2O43679 373 aa17.04■□□□□ 0.32
PTPRC-206ENST00000413409 HAUS5O94927 633 aa17.04■□□□□ 0.32
PTPRC-206ENST00000413409 RALBP11234 206 aa17.04■□□□□ 0.32
PTPRC-206ENST00000413409 NQO1P15559 274 aaKnown RBP17.04■□□□□ 0.32
PTPRC-206ENST00000413409 STMN1P16949 149 aa17.04■□□□□ 0.32
PTPRC-206ENST00000413409 LEPRP48357 1165 aaKnown RBP17.04■□□□□ 0.32
PTPRC-206ENST00000413409 DLG2Q15700 870 aa17.04■□□□□ 0.32
PTPRC-206ENST00000413409 PLEKHG6Q3KR16 790 aa17.04■□□□□ 0.32
PTPRC-206ENST00000413409 PCSK4Q6UW60 755 aa17.04■□□□□ 0.32
PTPRC-206ENST00000413409 RAPH1Q70E73 1250 aa17.04■□□□□ 0.32
PTPRC-206ENST00000413409 ARL14EPQ8N8R7 260 aaPredicted RBP17.04■□□□□ 0.32
PTPRC-206ENST00000413409 LSM14AQ8ND56 463 aaKnown RBP17.04■□□□□ 0.32
PTPRC-206ENST00000413409 SCG3Q8WXD2 468 aaKnown RBP17.04■□□□□ 0.32
PTPRC-206ENST00000413409 INPP5DQ92835 1189 aa17.04■□□□□ 0.32
PTPRC-206ENST00000413409 WBP2Q969T9 261 aa17.04■□□□□ 0.32
PTPRC-206ENST00000413409 KLHL29Q96CT2 875 aa17.04■□□□□ 0.32
PTPRC-206ENST00000413409 SPON2Q9BUD6 331 aa17.04■□□□□ 0.32
PTPRC-206ENST00000413409 IGHV1OR15-9A0A0B4J2B8 117 aa17.03■□□□□ 0.32
PTPRC-206ENST00000413409 INSIG1O15503 277 aa17.03■□□□□ 0.32
PTPRC-206ENST00000413409 GREM1O60565 184 aa17.03■□□□□ 0.32
PTPRC-206ENST00000413409 CKMP06732 381 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms