RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 EPG5Q9HCE0 2579 aa13.02□□□□□ -0.33
SSB-203ENST00000413002 MAP1BP46821 2468 aaKnown RBP13.01□□□□□ -0.33
SSB-203ENST00000413002 CCDC78A2IDD5 438 aa13.01□□□□□ -0.33
SSB-203ENST00000413002 USP27XA6NNY8 438 aa13.01□□□□□ -0.33
SSB-203ENST00000413002 AGRPO00253 132 aa13.01□□□□□ -0.33
SSB-203ENST00000413002 STX7O15400 261 aaKnown RBP13.01□□□□□ -0.33
SSB-203ENST00000413002 EML2O95834 649 aa13.01□□□□□ -0.33
SSB-203ENST00000413002 GP1BAP07359 652 aa13.01□□□□□ -0.33
SSB-203ENST00000413002 CDK4P11802 303 aa13.01□□□□□ -0.33
SSB-203ENST00000413002 ACP5P13686 325 aa13.01□□□□□ -0.33
SSB-203ENST00000413002 SPAM1P38567 509 aa13.01□□□□□ -0.33
SSB-203ENST00000413002 KCNJ1P48048 391 aa13.01□□□□□ -0.33
SSB-203ENST00000413002 DCDC1P59894 354 aa13.01□□□□□ -0.33
SSB-203ENST00000413002 MSLNQ13421 630 aaPredicted RBP13.01□□□□□ -0.33
SSB-203ENST00000413002 LONRF2Q1L5Z9 754 aa13.01□□□□□ -0.33
SSB-203ENST00000413002 PLA2G4EQ3MJ16 856 aa13.01□□□□□ -0.33
SSB-203ENST00000413002 KCTD11Q693B1 232 aa13.01□□□□□ -0.33
SSB-203ENST00000413002 OGFOD3Q6PK18 319 aa13.01□□□□□ -0.33
SSB-203ENST00000413002 ADGRG6Q86SQ4 1221 aa13.01□□□□□ -0.33
SSB-203ENST00000413002 SLC35F6Q8N357 371 aa13.01□□□□□ -0.33
SSB-203ENST00000413002 SDR16C5Q8N3Y7 309 aa13.01□□□□□ -0.33
SSB-203ENST00000413002 OR4K2Q8NGD2 314 aa13.01□□□□□ -0.33
SSB-203ENST00000413002 OR13C4Q8NGS5 318 aa13.01□□□□□ -0.33
SSB-203ENST00000413002 ZDHHC1Q8WTX9 485 aa13.01□□□□□ -0.33
SSB-203ENST00000413002 MS4A14Q96JA4 679 aa13.01□□□□□ -0.33
SSB-203ENST00000413002 PDLIM2Q96JY6 352 aa13.01□□□□□ -0.33
SSB-203ENST00000413002 CDH19Q9H159 772 aa13.01□□□□□ -0.33
SSB-203ENST00000413002 RAD18Q9NS91 495 aa13.01□□□□□ -0.33
SSB-203ENST00000413002 SMARCAL1Q9NZC9 954 aa13.01□□□□□ -0.33
SSB-203ENST00000413002 NCKIPSDQ9NZQ3 722 aa13.01□□□□□ -0.33
SSB-203ENST00000413002 HACD3Q9P035 362 aa13.01□□□□□ -0.33
SSB-203ENST00000413002 FKBPLQ9UIM3 349 aa13.01□□□□□ -0.33
SSB-203ENST00000413002 CLCA2Q9UQC9 943 aa13.01□□□□□ -0.33
SSB-203ENST00000413002 PKP3Q9Y446 797 aa13.01□□□□□ -0.33
SSB-203ENST00000413002 RNF215Q9Y6U7 377 aa13.01□□□□□ -0.33
SSB-203ENST00000413002 PTPRBP23467 1997 aa13.01□□□□□ -0.33
SSB-203ENST00000413002 ASPMQ8IZT6 3477 aa13.01□□□□□ -0.33
SSB-203ENST00000413002 PLXNB3Q9ULL4 1909 aa13□□□□□ -0.33
SSB-203ENST00000413002 GLYATL1P3A0A0U1RQE8 302 aa13□□□□□ -0.33
SSB-203ENST00000413002 GAPDHSO14556 408 aaPredicted RBP13□□□□□ -0.33
SSB-203ENST00000413002 GRID2O43424 1007 aa13□□□□□ -0.33
SSB-203ENST00000413002 SNX2O60749 519 aa13□□□□□ -0.33
SSB-203ENST00000413002 ECEL1O95672 775 aa13□□□□□ -0.33
SSB-203ENST00000413002 PROS1P07225 676 aa13□□□□□ -0.33
SSB-203ENST00000413002 LPOP22079 712 aaPredicted RBP13□□□□□ -0.33
SSB-203ENST00000413002 STIP1P31948 543 aaKnown RBP13□□□□□ -0.33
SSB-203ENST00000413002 CCL7P80098 99 aa13□□□□□ -0.33
SSB-203ENST00000413002 CYP4F3Q08477 520 aa13□□□□□ -0.33
SSB-203ENST00000413002 HLTFQ14527 1009 aaKnown RBP eCLIP13□□□□□ -0.33
SSB-203ENST00000413002 TAF1AQ15573 450 aaPredicted RBP13□□□□□ -0.33
SSB-203ENST00000413002 ST3GAL2Q16842 350 aa13□□□□□ -0.33
SSB-203ENST00000413002 C14orf28Q4W4Y0 310 aa13□□□□□ -0.33
SSB-203ENST00000413002 CDCP2Q5VXM1 449 aa13□□□□□ -0.33
SSB-203ENST00000413002 NAGSQ8N159 534 aa13□□□□□ -0.33
SSB-203ENST00000413002 NAT6Q93015 286 aa13□□□□□ -0.33
SSB-203ENST00000413002 RTP4Q96DX8 246 aa13□□□□□ -0.33
SSB-203ENST00000413002 PLEKHG4BQ96PX9 1271 aa13□□□□□ -0.33
SSB-203ENST00000413002 FAM96AQ9H5X1 160 aa13□□□□□ -0.33
SSB-203ENST00000413002 ETNK1Q9HBU6 452 aa13□□□□□ -0.33
SSB-203ENST00000413002 TRIM39Q9HCM9 518 aa13□□□□□ -0.33
SSB-203ENST00000413002 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13□□□□□ -0.33
SSB-203ENST00000413002 VPS18Q9P253 973 aa13□□□□□ -0.33
SSB-203ENST00000413002 LRIT1Q9P2V4 623 aa13□□□□□ -0.33
SSB-203ENST00000413002 NFKBIL1Q9UBC1 381 aaPredicted RBP13□□□□□ -0.33
SSB-203ENST00000413002 SLC23A2Q9UGH3 650 aa13□□□□□ -0.33
SSB-203ENST00000413002 ASXL3Q9C0F0 2248 aa13□□□□□ -0.33
SSB-203ENST00000413002 C2orf81A6NN90 581 aa12.99□□□□□ -0.33
SSB-203ENST00000413002 ZSCAN12O43309 604 aa12.99□□□□□ -0.33
SSB-203ENST00000413002 NUAK1O60285 661 aa12.99□□□□□ -0.33
SSB-203ENST00000413002 CSO75390 466 aaKnown RBP12.99□□□□□ -0.33
SSB-203ENST00000413002 CDK14O94921 469 aa12.99□□□□□ -0.33
SSB-203ENST00000413002 RPL22P35268 128 aaKnown RBP12.99□□□□□ -0.33
SSB-203ENST00000413002 GRIA1P42261 906 aa12.99□□□□□ -0.33
SSB-203ENST00000413002 TERF1P54274 439 aa12.99□□□□□ -0.33
SSB-203ENST00000413002 SEPT6Q14141 434 aa12.99□□□□□ -0.33
SSB-203ENST00000413002 POU6F1Q14863 301 aa12.99□□□□□ -0.33
SSB-203ENST00000413002 CCNG2Q16589 344 aa12.99□□□□□ -0.33
SSB-203ENST00000413002 P3H1Q32P28 736 aa12.99□□□□□ -0.33
SSB-203ENST00000413002 CERCAMQ5T4B2 595 aa12.99□□□□□ -0.33
SSB-203ENST00000413002 PHYKPLQ8IUZ5 450 aa12.99□□□□□ -0.33
SSB-203ENST00000413002 KLHDC8BQ8IXV7 354 aa12.99□□□□□ -0.33
SSB-203ENST00000413002 ARL14Q8N4G2 192 aa12.99□□□□□ -0.33
SSB-203ENST00000413002 DCBLD1Q8N8Z6 715 aa12.99□□□□□ -0.33
SSB-203ENST00000413002 CCDC89Q8N998 374 aa12.99□□□□□ -0.33
SSB-203ENST00000413002 OR52K1Q8NGK4 314 aa12.99□□□□□ -0.33
SSB-203ENST00000413002 BRSK1Q8TDC3 778 aa12.99□□□□□ -0.33
SSB-203ENST00000413002 UBE2Q2Q8WVN8 375 aa12.99□□□□□ -0.33
SSB-203ENST00000413002 ZCCHC14Q8WYQ9 949 aaKnown RBP12.99□□□□□ -0.33
SSB-203ENST00000413002 FRMD8P1Q9BZ68 369 aaPredicted RBP12.99□□□□□ -0.33
SSB-203ENST00000413002 LRRC40Q9H9A6 602 aa12.99□□□□□ -0.33
SSB-203ENST00000413002 RAB6BQ9NRW1 208 aa12.99□□□□□ -0.33
SSB-203ENST00000413002 TBC1D29Q9UFV1 150 aa12.99□□□□□ -0.33
SSB-203ENST00000413002 ATXN7L1Q9ULK2 861 aaPredicted RBP12.99□□□□□ -0.33
SSB-203ENST00000413002 PYCARDQ9ULZ3 195 aa12.99□□□□□ -0.33
SSB-203ENST00000413002 DNAJC16Q9Y2G8 782 aa12.99□□□□□ -0.33
SSB-203ENST00000413002 JRKLQ9Y4A0 524 aa12.99□□□□□ -0.33
SSB-203ENST00000413002 A0A1W2PQM1 296 aa12.98□□□□□ -0.33
SSB-203ENST00000413002 PMS2P1A4D2B8 440 aa12.98□□□□□ -0.33
SSB-203ENST00000413002 TAF4O00268 1085 aa12.98□□□□□ -0.33
SSB-203ENST00000413002 LDB2O43679 373 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms