RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 RDH12Q96NR8 316 aa13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 CHCHD6Q9BRQ6 235 aa13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 GPN2Q9H9Y4 310 aaPredicted RBP13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 PDGFCQ9NRA1 345 aa13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 EXD2Q9NVH0 621 aa13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 FZD10Q9ULW2 581 aa13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 LAMB1P07942 1786 aa13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 ELOVL7A1L3X0 281 aa13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 SEC22BO75396 215 aa13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 CYP11A1P05108 521 aa13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 YES1P07947 543 aa13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 MATN1P21941 496 aa13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 HNF4AP41235 474 aa13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 DNAJB13P59910 316 aa13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 MVKQ03426 396 aa13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 EFHBQ8N7U6 833 aa13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 OR5K1Q8NHB7 308 aa13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 TPD52L3Q96J77 140 aa13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 TMEM161AQ9NX61 479 aa13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 ZNF487B1APH4 448 aa13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 HNRNPCL2B2RXH8 293 aa13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 NOS1APO75052 506 aaPredicted RBP13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 CCT3P49368 545 aaKnown RBP13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 SLC10A2Q12908 348 aaPredicted RBP13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 LCP2Q13094 533 aa13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 TSTA3Q13630 321 aaPredicted RBP13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 TAZQ16635 292 aa13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 ZNF181Q2M3W8 571 aa13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 Q3C1V9 767 aa13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 PTRHD1Q6GMV3 140 aaKnown RBP13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 GPSM1Q86YR5 675 aa13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 SPATA22Q8NHS9 363 aa13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 TP63Q9H3D4 680 aaPredicted RBP13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 AGPAT4Q9NRZ5 378 aa13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 ING3Q9NXR8 418 aa13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 SNTG2Q9NY99 539 aa13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 HES2Q9Y543 173 aa13.82□□□□□ -0.2
CLTCL1-201ENST00000412649 CROCCQ5TZA2 2017 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 NME4O00746 187 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 SLC26A2P50443 739 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 RAB6CQ53S08 254 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 NOTUMQ6P988 496 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 C11orf74Q86VG3 221 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 TMEM74Q96NL1 305 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 BCO2Q9BYV7 579 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 RAB6CQ9H0N0 254 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 CLEC4MQ9H2X3 399 aaPredicted RBP13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 TUT1Q9H6E5 874 aaKnown RBP13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 MEAF6Q9HAF1 191 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 SMURF2Q9HAU4 748 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 GLOD4Q9HC38 313 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 TMEM181Q9P2C4 612 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 SLC27A5Q9Y2P5 690 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 A0A1W2PP18 115 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 PRR23AA6NEV1 266 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 A8MU76 341 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 B4GAT1O43505 415 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 HSD17B1P14061 328 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 S100A3P33764 101 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 BACE1P56817 501 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 FAM187BQ17R55 369 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 AGAP7PQ5VUJ5 663 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 MZT2BQ6NZ67 158 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 SPPL2AQ8TCT8 520 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 ZFP90Q8TF47 636 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 FCGR1BQ92637 280 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 PIWIL1Q96J94 861 aaKnown RBP13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 MMP27Q9H306 513 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 NECTIN3Q9NQS3 549 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 ZMYM5Q9UJ78 669 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 TMEM98Q9Y2Y6 226 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 DDX60Q8IY21 1712 aaKnown RBP13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 RGS14O43566 566 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 GJB1P08034 283 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 SLC35E2BP0CK96 405 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 LRP8Q14114 963 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 TSNQ15631 228 aaKnown RBP13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 LY6KQ17RY6 165 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 KLHL12Q53G59 568 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 MILR1Q7Z6M3 343 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 HID1Q8IV36 788 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 MINDY1Q8N5J2 469 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 CLEC4CQ8WTT0 213 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 NIFKQ9BYG3 293 aaKnown RBP13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 TRIM8Q9BZR9 551 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 INIPQ9NRY2 104 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 POU2F3Q9UKI9 436 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 PCDHB3Q9Y5E6 796 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 SESN1Q9Y6P5 492 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 HMX2A2RU54 273 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 CYP7B1O75881 506 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 RPLP0P05388 317 aaKnown RBP13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 FMO4P31512 558 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 SLC15A1P46059 708 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 CLCQ05315 142 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 PHKG1Q16816 387 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 ZNF484Q5JVG2 852 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 PPP2R2DQ66LE6 453 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 PRR23CQ6ZRP0 262 aa13.81□□□□□ -0.2
CLTCL1-201ENST00000412649 CAMKK1Q8N5S9 505 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms