RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 SESN2P58004 480 aaPredicted RBP23.61■■□□□ 1.37
UBE2E3-202ENST00000410062 XIAPP98170 497 aa23.61■■□□□ 1.37
UBE2E3-202ENST00000410062 DNAJC3Q13217 504 aa23.61■■□□□ 1.37
UBE2E3-202ENST00000410062 PROX2Q3B8N5 592 aa23.61■■□□□ 1.37
UBE2E3-202ENST00000410062 KHDC1Q4VXA5 237 aaKnown RBP23.61■■□□□ 1.37
UBE2E3-202ENST00000410062 PYCR3Q53H96 274 aa23.61■■□□□ 1.37
UBE2E3-202ENST00000410062 ANKRD22Q5VYY1 191 aa23.61■■□□□ 1.37
UBE2E3-202ENST00000410062 ADGRG6Q86SQ4 1221 aa23.61■■□□□ 1.37
UBE2E3-202ENST00000410062 GKN2Q86XP6 184 aa23.61■■□□□ 1.37
UBE2E3-202ENST00000410062 GDAP1Q8TB36 358 aa23.61■■□□□ 1.37
UBE2E3-202ENST00000410062 ZNF398Q8TD17 642 aa23.61■■□□□ 1.37
UBE2E3-202ENST00000410062 CPT1BQ92523 772 aa23.61■■□□□ 1.37
UBE2E3-202ENST00000410062 NLE1Q9NVX2 485 aaPredicted RBP23.61■■□□□ 1.37
UBE2E3-202ENST00000410062 ZNHIT2Q9UHR6 403 aa23.61■■□□□ 1.37
UBE2E3-202ENST00000410062 APPL1Q9UKG1 709 aa23.61■■□□□ 1.37
UBE2E3-202ENST00000410062 PLEKHM1Q9Y4G2 1056 aa23.61■■□□□ 1.37
UBE2E3-202ENST00000410062 TPP1O14773 563 aa23.61■■□□□ 1.37
UBE2E3-202ENST00000410062 SRP72O76094 671 aaKnown RBP23.61■■□□□ 1.37
UBE2E3-202ENST00000410062 ZNF8P17098 575 aaPredicted RBP23.61■■□□□ 1.37
UBE2E3-202ENST00000410062 ADCY8P40145 1251 aa23.61■■□□□ 1.37
UBE2E3-202ENST00000410062 HADHAP40939 763 aa23.61■■□□□ 1.37
UBE2E3-202ENST00000410062 PTGIRP43119 386 aa23.61■■□□□ 1.37
UBE2E3-202ENST00000410062 PEX6Q13608 980 aa23.61■■□□□ 1.37
UBE2E3-202ENST00000410062 ITGA9Q13797 1035 aa23.61■■□□□ 1.37
UBE2E3-202ENST00000410062 N4BP2L1Q5TBK1 243 aaPredicted RBP23.61■■□□□ 1.37
UBE2E3-202ENST00000410062 ZNF534Q76KX8 674 aa23.61■■□□□ 1.37
UBE2E3-202ENST00000410062 TAF8Q7Z7C8 310 aa23.61■■□□□ 1.37
UBE2E3-202ENST00000410062 GALNT13Q8IUC8 556 aa23.61■■□□□ 1.37
UBE2E3-202ENST00000410062 STYXQ8WUJ0 223 aa23.61■■□□□ 1.37
UBE2E3-202ENST00000410062 APOLD1Q96LR9 279 aa23.61■■□□□ 1.37
UBE2E3-202ENST00000410062 OR2M4Q96R27 311 aa23.61■■□□□ 1.37
UBE2E3-202ENST00000410062 TOR4AQ9NXH8 423 aa23.61■■□□□ 1.37
UBE2E3-202ENST00000410062 ST14Q9Y5Y6 855 aa23.61■■□□□ 1.37
UBE2E3-202ENST00000410062 GOLGA4Q13439 2230 aaKnown RBP23.6■■□□□ 1.37
UBE2E3-202ENST00000410062 AK4P27144 223 aaPredicted RBP23.6■■□□□ 1.37
UBE2E3-202ENST00000410062 MAGEA6P43360 314 aa23.6■■□□□ 1.37
UBE2E3-202ENST00000410062 CDK16Q00536 496 aa23.6■■□□□ 1.37
UBE2E3-202ENST00000410062 ZCCHC8Q6NZY4 707 aaKnown RBP23.6■■□□□ 1.37
UBE2E3-202ENST00000410062 GPBAR1Q8TDU6 330 aa23.6■■□□□ 1.37
UBE2E3-202ENST00000410062 SLCO2A1Q92959 643 aa23.6■■□□□ 1.37
UBE2E3-202ENST00000410062 C19orf43Q9BQ61 176 aa23.6■■□□□ 1.37
UBE2E3-202ENST00000410062 ASB8Q9H765 288 aa23.6■■□□□ 1.37
UBE2E3-202ENST00000410062 TRNAU1APQ9NX07 287 aaKnown RBP23.6■■□□□ 1.37
UBE2E3-202ENST00000410062 PLXNB3Q9ULL4 1909 aa23.6■■□□□ 1.37
UBE2E3-202ENST00000410062 HEATR9A2RTY3 570 aa23.59■■□□□ 1.37
UBE2E3-202ENST00000410062 CCDC188H7C350 402 aa23.59■■□□□ 1.37
UBE2E3-202ENST00000410062 NUAK1O60285 661 aa23.59■■□□□ 1.37
UBE2E3-202ENST00000410062 TMEM63AO94886 807 aa23.59■■□□□ 1.37
UBE2E3-202ENST00000410062 FTH1P19P0C7X4 201 aa23.59■■□□□ 1.37
UBE2E3-202ENST00000410062 ADRA1DP25100 572 aa23.59■■□□□ 1.37
UBE2E3-202ENST00000410062 CRADDP78560 199 aa23.59■■□□□ 1.37
UBE2E3-202ENST00000410062 CTBSQ01459 385 aa23.59■■□□□ 1.37
UBE2E3-202ENST00000410062 NFATC2Q13469 925 aa23.59■■□□□ 1.37
UBE2E3-202ENST00000410062 CCDC157Q569K6 752 aa23.59■■□□□ 1.37
UBE2E3-202ENST00000410062 C6orf132Q5T0Z8 1188 aa23.59■■□□□ 1.37
UBE2E3-202ENST00000410062 LRRC8BQ6P9F7 803 aa23.59■■□□□ 1.37
UBE2E3-202ENST00000410062 SLCO6A1Q86UG4 719 aa23.59■■□□□ 1.37
UBE2E3-202ENST00000410062 NRROSQ86YC3 692 aa23.59■■□□□ 1.37
UBE2E3-202ENST00000410062 SDR16C5Q8N3Y7 309 aa23.59■■□□□ 1.37
UBE2E3-202ENST00000410062 PNPLA1Q8N8W4 532 aa23.59■■□□□ 1.37
UBE2E3-202ENST00000410062 FAM181AQ8N9Y4 354 aa23.59■■□□□ 1.37
UBE2E3-202ENST00000410062 SCG3Q8WXD2 468 aaKnown RBP23.59■■□□□ 1.37
UBE2E3-202ENST00000410062 RANBP9Q96S59 729 aa23.59■■□□□ 1.37
UBE2E3-202ENST00000410062 FAM96AQ9H5X1 160 aa23.59■■□□□ 1.37
UBE2E3-202ENST00000410062 SIRPGQ9P1W8 387 aa23.59■■□□□ 1.37
UBE2E3-202ENST00000410062 ASIC3Q9UHC3 531 aa23.59■■□□□ 1.37
UBE2E3-202ENST00000410062 CKMT2P17540 419 aa23.58■■□□□ 1.37
UBE2E3-202ENST00000410062 MC4RP32245 332 aa23.58■■□□□ 1.37
UBE2E3-202ENST00000410062 DAB2P98082 770 aa23.58■■□□□ 1.37
UBE2E3-202ENST00000410062 ILF3Q12906 894 aaKnown RBP eCLIP23.58■■□□□ 1.372e-18■■■■■ 34.1
UBE2E3-202ENST00000410062 PTK6Q13882 451 aa23.58■■□□□ 1.37
UBE2E3-202ENST00000410062 GPRC6AQ5T6X5 926 aa23.58■■□□□ 1.37
UBE2E3-202ENST00000410062 LVRNQ6Q4G3 990 aa23.58■■□□□ 1.37
UBE2E3-202ENST00000410062 CHST15Q7LFX5 561 aaPredicted RBP23.58■■□□□ 1.37
UBE2E3-202ENST00000410062 FAM46DQ8NEK8 389 aa23.58■■□□□ 1.37
UBE2E3-202ENST00000410062 CDKN2AIPNLQ96HQ2 116 aa23.58■■□□□ 1.37
UBE2E3-202ENST00000410062 ZNF778Q96MU6 729 aa23.58■■□□□ 1.37
UBE2E3-202ENST00000410062 BOCQ9BWV1 1114 aa23.58■■□□□ 1.37
UBE2E3-202ENST00000410062 GSDMCQ9BYG8 508 aa23.58■■□□□ 1.37
UBE2E3-202ENST00000410062 RMI1Q9H9A7 625 aa23.58■■□□□ 1.37
UBE2E3-202ENST00000410062 SMOXQ9NWM0 555 aa23.58■■□□□ 1.37
UBE2E3-202ENST00000410062 SLC2A6Q9UGQ3 507 aa23.58■■□□□ 1.37
UBE2E3-202ENST00000410062 GPR34Q9UPC5 381 aa23.58■■□□□ 1.37
UBE2E3-202ENST00000410062 TCAF1Q9Y4C2 921 aa23.58■■□□□ 1.37
UBE2E3-202ENST00000410062 LY6G6EA0A0G2JKS1 128 aa23.57■■□□□ 1.36
UBE2E3-202ENST00000410062 CDK14O94921 469 aa23.57■■□□□ 1.36
UBE2E3-202ENST00000410062 ARSDP51689 593 aa23.57■■□□□ 1.36
UBE2E3-202ENST00000410062 DR1Q01658 176 aa23.57■■□□□ 1.36
UBE2E3-202ENST00000410062 TMEM115Q12893 351 aaPredicted RBP23.57■■□□□ 1.36
UBE2E3-202ENST00000410062 SKIDA1Q1XH10 827 aa23.57■■□□□ 1.36
UBE2E3-202ENST00000410062 SLC30A9Q6PML9 568 aa23.57■■□□□ 1.36
UBE2E3-202ENST00000410062 DDHD1Q8NEL9 900 aa23.57■■□□□ 1.36
UBE2E3-202ENST00000410062 RUNDC3BQ96NL0 473 aa23.57■■□□□ 1.36
UBE2E3-202ENST00000410062 KRT12Q99456 494 aa23.57■■□□□ 1.36
UBE2E3-202ENST00000410062 CHRAC1Q9NRG0 131 aa23.57■■□□□ 1.36
UBE2E3-202ENST00000410062 BFARQ9NZS9 450 aa23.57■■□□□ 1.36
UBE2E3-202ENST00000410062 SLC30A1Q9Y6M5 507 aa23.57■■□□□ 1.36
UBE2E3-202ENST00000410062 U3KQA8 63 aa23.57■■□□□ 1.36
UBE2E3-202ENST00000410062 GOLGA8MH3BSY2 632 aa23.57■■□□□ 1.36
UBE2E3-202ENST00000410062 H7C0S8 307 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms