RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 E9PMD0 336 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 PDHXO00330 501 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 BBOX1O75936 387 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 PLEKHA8P1O95397 391 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 H6PDO95479 791 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 DLDP09622 509 aaKnown RBP5.48□□□□□ -1.53
CLK1-202ENST00000409403 KITP10721 976 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 THRAP10827 490 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 MYL2P10916 166 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 KRT5P13647 590 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 P4HA1P13674 534 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 PON1P27169 355 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 SLC7A1P30825 629 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 CIITAP33076 1130 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 CHKAP35790 457 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 RPS19P39019 145 aaKnown RBP5.48□□□□□ -1.53
CLK1-202ENST00000409403 COPAP53621 1224 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 ARL4CP56559 192 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 GPC5P78333 572 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 BTKQ06187 659 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 WASHC5Q12768 1159 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 TROAPQ12815 778 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 COASYQ13057 564 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 ATP1A4Q13733 1029 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 PRKD1Q15139 912 aaPredicted RBP5.48□□□□□ -1.53
CLK1-202ENST00000409403 TRIP13Q15645 432 aaPredicted RBP5.48□□□□□ -1.53
CLK1-202ENST00000409403 SLC1A5Q15758 541 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 FAM214AQ32MH5 1076 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 KCTD21Q4G0X4 260 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 LRRC24Q50LG9 513 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 BOLA3Q53S33 107 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 C6orf10Q5SRN2 563 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 C6orf183Q5T699 404 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 SLX4IPQ5VYV7 408 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 LPCAT4Q643R3 524 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 KRT80Q6KB66 452 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 ZNF790Q6PG37 636 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 LINC00299Q6ZSB3 139 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 ZNF804AQ7Z570 1209 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 GPR180Q86V85 440 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 HEATR4Q86WZ0 1026 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 IL17RDQ8NFM7 739 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 ANGPTL6Q8NI99 470 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 TRIM63Q969Q1 353 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 TAMM41Q96BW9 452 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 RMND5BQ96G75 393 aaPredicted RBP5.48□□□□□ -1.53
CLK1-202ENST00000409403 CNDP2Q96KP4 475 aaKnown RBP5.48□□□□□ -1.53
CLK1-202ENST00000409403 CNBD2Q96M20 576 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 ZNF512Q96ME7 567 aaPredicted RBP5.48□□□□□ -1.53
CLK1-202ENST00000409403 GCNAQ96QF7 691 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 RBM15Q96T37 977 aaKnown RBP eCLIP5.48□□□□□ -1.535e-8■■■□□ 15.1
CLK1-202ENST00000409403 TBCBQ99426 244 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 SLC39A3Q9BRY0 314 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 C1orf43Q9BWL3 253 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 OSBPL11Q9BXB4 747 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 GCOM2Q9BZD3 368 aaPredicted RBP5.48□□□□□ -1.53
CLK1-202ENST00000409403 NMUR2Q9GZQ4 415 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 DIABLOQ9NR28 239 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 ARMC1Q9NVT9 282 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 HACD3Q9P035 362 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 GTF3C4Q9UKN8 822 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 PRPF19Q9UMS4 504 aaKnown RBP5.48□□□□□ -1.53
CLK1-202ENST00000409403 SLC8A2Q9UPR5 921 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 TEP1Q99973 2627 aaKnown RBP5.48□□□□□ -1.53
CLK1-202ENST00000409403 DOCK2Q92608 1830 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 ZNF462Q96JM2 2506 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 ASPMQ8IZT6 3477 aa5.48□□□□□ -1.53
CLK1-202ENST00000409403 IQANK1A0A1B0GTG1 560 aa5.47□□□□□ -1.53
CLK1-202ENST00000409403 RHPN2P1A8MT19 583 aa5.47□□□□□ -1.53
CLK1-202ENST00000409403 ISM1B1AKI9 464 aa5.47□□□□□ -1.53
CLK1-202ENST00000409403 ANKRD63C9JTQ0 380 aa5.47□□□□□ -1.53
CLK1-202ENST00000409403 H3BSA7 217 aa5.47□□□□□ -1.53
CLK1-202ENST00000409403 XPO1O14980 1071 aaKnown RBP5.47□□□□□ -1.53
CLK1-202ENST00000409403 TEX28O15482 410 aa5.47□□□□□ -1.53
CLK1-202ENST00000409403 LAMTOR5O43504 91 aa5.47□□□□□ -1.53
CLK1-202ENST00000409403 SNAP91O60641 907 aa5.47□□□□□ -1.53
CLK1-202ENST00000409403 GMNNO75496 209 aa5.47□□□□□ -1.53
CLK1-202ENST00000409403 STAMBPO95630 424 aa5.47□□□□□ -1.53
CLK1-202ENST00000409403 CHEK2O96017 543 aa5.47□□□□□ -1.53
CLK1-202ENST00000409403 C8AP07357 584 aa5.47□□□□□ -1.53
CLK1-202ENST00000409403 SBK3P0C264 359 aa5.47□□□□□ -1.53
CLK1-202ENST00000409403 MCF2P10911 925 aa5.47□□□□□ -1.53
CLK1-202ENST00000409403 CHRNB1P11230 501 aa5.47□□□□□ -1.53
CLK1-202ENST00000409403 M6PRP20645 277 aa5.47□□□□□ -1.53
CLK1-202ENST00000409403 ADORA1P30542 326 aa5.47□□□□□ -1.53
CLK1-202ENST00000409403 S100A5P33763 92 aa5.47□□□□□ -1.53
CLK1-202ENST00000409403 COPB2P35606 906 aa5.47□□□□□ -1.53
CLK1-202ENST00000409403 PIK3CAP42336 1068 aa5.47□□□□□ -1.53
CLK1-202ENST00000409403 PIK3CBP42338 1070 aa5.47□□□□□ -1.53
CLK1-202ENST00000409403 CLRN1P58418 232 aa5.47□□□□□ -1.53
CLK1-202ENST00000409403 TXNL4AP83876 142 aaKnown RBP5.47□□□□□ -1.53
CLK1-202ENST00000409403 MYBPC1Q00872 1141 aa5.47□□□□□ -1.53
CLK1-202ENST00000409403 STX3Q13277 289 aa5.47□□□□□ -1.53
CLK1-202ENST00000409403 GRAPQ13588 217 aa5.47□□□□□ -1.53
CLK1-202ENST00000409403 CCNIQ14094 377 aa5.47□□□□□ -1.53
CLK1-202ENST00000409403 PUM1Q14671 1186 aaKnown RBP eCLIP5.47□□□□□ -1.53
CLK1-202ENST00000409403 ZNF846Q147U1 533 aa5.47□□□□□ -1.53
CLK1-202ENST00000409403 LRRC36Q1X8D7 754 aa5.47□□□□□ -1.53
CLK1-202ENST00000409403 METTL24Q5JXM2 366 aa5.47□□□□□ -1.53
CLK1-202ENST00000409403 WDR45BQ5MNZ6 344 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms