RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 MS4A13Q5J8X5 152 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 PIK3R6Q5UE93 754 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 FAM171BQ6P995 826 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 FAM180AQ6UWF9 173 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 CCDC81Q6ZN84 652 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 FGD2Q7Z6J4 655 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 NOA1Q8NC60 698 aaKnown RBP4.98□□□□□ -1.61
SCN3A-203ENST00000409101 OR2AP1Q8NGE2 309 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 PMEPA1Q969W9 287 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 MS4A4AQ96JQ5 239 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 TMEM209Q96SK2 561 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 ZNF607Q96SK3 696 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 PCDHB18PQ96TA0 734 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 SPATA9Q9BWV2 254 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 FBRSQ9HAH7 460 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 APOBEC3GQ9HC16 384 aaKnown RBP4.98□□□□□ -1.61
SCN3A-203ENST00000409101 WRAP73Q9P2S5 460 aaPredicted RBP4.98□□□□□ -1.61
SCN3A-203ENST00000409101 FTSJ1Q9UET6 329 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 FKBPLQ9UIM3 349 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 MFHAS1Q9Y4C4 1052 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 NID2Q14112 1375 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 H3BN98 237 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 KDELR3O43731 214 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 SERPINB7O75635 380 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 SNUPNO95149 360 aaKnown RBP4.98□□□□□ -1.61
SCN3A-203ENST00000409101 VNN1O95497 513 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 GRIA4P48058 902 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 PGDP52209 483 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 FRG1Q14331 258 aaKnown RBP4.98□□□□□ -1.61
SCN3A-203ENST00000409101 MEA1Q16626 185 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 FBXO43Q4G163 708 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 MLIPQ5VWP3 458 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 ZNF549Q6P9A3 640 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 POMZP3Q6PJE2 187 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 KBTBD6Q86V97 674 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 TMC8Q8IU68 726 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 EPHX4Q8IUS5 362 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 SPATA6LQ8N4H0 392 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 SLC43A3Q8NBI5 491 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 FAM98AQ8NCA5 519 aaKnown RBP4.98□□□□□ -1.61
SCN3A-203ENST00000409101 CLEC4CQ8WTT0 213 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 RAD51AP1Q96B01 352 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 CENPTQ96BT3 561 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 ZHX1-C8orf76Q96EF9 292 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 ZNF354BQ96LW1 612 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 NSMCE2Q96MF7 247 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 MBOAT7Q96N66 472 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 TOX2Q96NM4 488 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.98□□□□□ -1.61
SCN3A-203ENST00000409101 TMBIM4Q9HC24 238 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 EQTNQ9NQ60 294 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 FLRT1Q9NZU1 646 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 BTRCQ9Y297 605 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 TCAF1Q9Y4C2 921 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 COL16A1Q07092 1604 aaPredicted RBP4.98□□□□□ -1.61
SCN3A-203ENST00000409101 C15orf38-AP3S2A0A0A6YYH1 394 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 MRASO14807 208 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 PPEF2O14830 753 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 KMOO15229 486 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 DHX15O43143 795 aaKnown RBP4.98□□□□□ -1.61
SCN3A-203ENST00000409101 CPN2P22792 545 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 HSPA13P48723 471 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 SEPHS1P49903 392 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 PDX1P52945 283 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 C1DQ13901 141 aaKnown RBP4.98□□□□□ -1.61
SCN3A-203ENST00000409101 PTCRAQ6ISU1 281 aaPredicted RBP4.98□□□□□ -1.61
SCN3A-203ENST00000409101 FBXL22Q6P050 247 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 BEND5Q7L4P6 421 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 ARPINQ7Z6K5 226 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 OSTM1Q86WC4 334 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 IL22RA1Q8N6P7 574 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 TXNDC5Q8NBS9 432 aaKnown RBP4.98□□□□□ -1.61
SCN3A-203ENST00000409101 TCP10LQ8TDR4 215 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 UTP15Q8TED0 518 aaKnown RBP4.98□□□□□ -1.61
SCN3A-203ENST00000409101 FNIP1Q8TF40 1166 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 TFAP2BQ92481 460 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 ZDHHC12Q96GR4 267 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 ITCHQ96J02 903 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 SEC16BQ96JE7 1060 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 CDADC1Q9BWV3 514 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 IRF2BPLQ9H1B7 796 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 SMOC2Q9H3U7 446 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 WNT7AO00755 349 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 KAT7O95251 611 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 TOP3BO95985 862 aaKnown RBP4.98□□□□□ -1.61
SCN3A-203ENST00000409101 NTRK1P04629 796 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 SRPRAP08240 638 aaKnown RBP4.98□□□□□ -1.61
SCN3A-203ENST00000409101 DRD1P21728 446 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 ME2P23368 584 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 ATP5A1P25705 553 aaKnown RBP4.98□□□□□ -1.61
SCN3A-203ENST00000409101 RANBP1P43487 201 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 KCNJ5P48544 419 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 HNRNPDQ14103 355 aaKnown RBP4.98□□□□□ -1.61
SCN3A-203ENST00000409101 SGCBQ16585 318 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 RALGPS1Q5JS13 557 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 NEK5Q6P3R8 708 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 EID3Q8N140 333 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 CRYBG2Q8N1P7 616 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 SMG8Q8ND04 991 aaKnown RBP4.98□□□□□ -1.61
SCN3A-203ENST00000409101 TTLQ8NG68 377 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms