RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 MRPL40Q9NQ50 206 aaKnown RBP9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 ABHD10Q9NUJ1 306 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 IL20Q9NYY1 176 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 B4GALT6Q9UBX8 382 aa9.67□□□□□ -0.86
NIF3L1-202ENST00000409020 CACNA1GO43497 2377 aa9.66□□□□□ -0.86
NIF3L1-202ENST00000409020 ASXL3Q9C0F0 2248 aa9.66□□□□□ -0.86
NIF3L1-202ENST00000409020 ANKRD36A6QL64 1941 aa9.66□□□□□ -0.86
NIF3L1-202ENST00000409020 TMEM202A6NGA9 273 aa9.66□□□□□ -0.86
NIF3L1-202ENST00000409020 SGTAO43765 313 aa9.66□□□□□ -0.86
NIF3L1-202ENST00000409020 LZTS3O60299 673 aaPredicted RBP9.66□□□□□ -0.86
NIF3L1-202ENST00000409020 MFAP3LO75121 409 aa9.66□□□□□ -0.86
NIF3L1-202ENST00000409020 TGM2P21980 687 aa9.66□□□□□ -0.86
NIF3L1-202ENST00000409020 LHCGRP22888 699 aa9.66□□□□□ -0.86
NIF3L1-202ENST00000409020 CCND1P24385 295 aa9.66□□□□□ -0.86
NIF3L1-202ENST00000409020 ZNF135P52742 658 aaPredicted RBP9.66□□□□□ -0.86
NIF3L1-202ENST00000409020 AP1S1P61966 158 aa9.66□□□□□ -0.86
NIF3L1-202ENST00000409020 MRPS25P82663 173 aaKnown RBP9.66□□□□□ -0.86
NIF3L1-202ENST00000409020 GBE1Q04446 702 aa9.66□□□□□ -0.86
NIF3L1-202ENST00000409020 COX10Q12887 443 aa9.66□□□□□ -0.86
NIF3L1-202ENST00000409020 PERM1Q5SV97 790 aa9.66□□□□□ -0.86
NIF3L1-202ENST00000409020 RNF187Q5TA31 235 aaPredicted RBP9.66□□□□□ -0.86
NIF3L1-202ENST00000409020 LIPIQ6XZB0 460 aa9.66□□□□□ -0.86
NIF3L1-202ENST00000409020 RFLNAQ6ZTI6 216 aa9.66□□□□□ -0.86
NIF3L1-202ENST00000409020 DPPA4Q7L190 304 aa9.66□□□□□ -0.86
NIF3L1-202ENST00000409020 RD3Q7Z3Z2 195 aa9.66□□□□□ -0.86
NIF3L1-202ENST00000409020 TSPAN33Q86UF1 283 aa9.66□□□□□ -0.86
NIF3L1-202ENST00000409020 HID1Q8IV36 788 aa9.66□□□□□ -0.86
NIF3L1-202ENST00000409020 SLC35F3Q8IY50 421 aa9.66□□□□□ -0.86
NIF3L1-202ENST00000409020 LSMEM2Q8N112 164 aa9.66□□□□□ -0.86
NIF3L1-202ENST00000409020 LZTR1Q8N653 840 aa9.66□□□□□ -0.86
NIF3L1-202ENST00000409020 PQLC3Q8N755 202 aa9.66□□□□□ -0.86
NIF3L1-202ENST00000409020 DCBLD1Q8N8Z6 715 aa9.66□□□□□ -0.86
NIF3L1-202ENST00000409020 FAM181AQ8N9Y4 354 aa9.66□□□□□ -0.86
NIF3L1-202ENST00000409020 TTC13Q8NBP0 860 aa9.66□□□□□ -0.86
NIF3L1-202ENST00000409020 FAM174AQ8TBP5 190 aa9.66□□□□□ -0.86
NIF3L1-202ENST00000409020 IFI44Q8TCB0 444 aa9.66□□□□□ -0.86
NIF3L1-202ENST00000409020 WDR60Q8WVS4 1066 aa9.66□□□□□ -0.86
NIF3L1-202ENST00000409020 RFFLQ8WZ73 363 aa9.66□□□□□ -0.86
NIF3L1-202ENST00000409020 RAPGEF5Q92565 580 aa9.66□□□□□ -0.86
NIF3L1-202ENST00000409020 ZNF599Q96NL3 588 aa9.66□□□□□ -0.86
NIF3L1-202ENST00000409020 MGME1Q9BQP7 344 aa9.66□□□□□ -0.86
NIF3L1-202ENST00000409020 APOOQ9BUR5 198 aa9.66□□□□□ -0.86
NIF3L1-202ENST00000409020 LGR4Q9BXB1 951 aa9.66□□□□□ -0.86
NIF3L1-202ENST00000409020 NT5MQ9NPB1 228 aa9.66□□□□□ -0.86
NIF3L1-202ENST00000409020 SCUBE2Q9NQ36 999 aa9.66□□□□□ -0.86
NIF3L1-202ENST00000409020 CLCA2Q9UQC9 943 aa9.66□□□□□ -0.86
NIF3L1-202ENST00000409020 URB1O60287 2271 aaKnown RBP9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 A0A1W2PNU3 283 aaPredicted RBP9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 CPED1A4D0V7 1026 aa9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 PMS2P1A4D2B8 440 aa9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 NPIPB15A6NHN6 443 aaPredicted RBP9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 H3BM21 787 aa9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 YY2O15391 372 aa9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 HTRA2O43464 458 aaPredicted RBP9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 TLX3O43711 291 aaPredicted RBP9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 PDHA1P08559 390 aa9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 ALPIP09923 528 aa9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 ELFN1P0C7U0 828 aa9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 ALPPL2P10696 532 aa9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 CTPS1P17812 591 aa9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 HNF1BP35680 557 aa9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 MMP13P45452 471 aa9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 SERPINB8P50452 374 aa9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 SUOXP51687 545 aa9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 MTTPP55157 894 aa9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 YPEL5P62699 121 aa9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 PLOD1Q02809 727 aaPredicted RBP9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 SLC10A2Q12908 348 aaPredicted RBP9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 ILKQ13418 452 aa9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 GRM3Q14832 879 aa9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 RASA2Q15283 850 aa9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 COL28A1Q2UY09 1125 aa9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 ANKRD20A8PQ5CZ79 823 aa9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 FAXCQ5TGI0 409 aa9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 CDCP2Q5VXM1 449 aa9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 DENND2CQ68D51 928 aa9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 ENPP7Q6UWV6 458 aa9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 NLRP9Q7RTR0 991 aa9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 EFL1Q7Z2Z2 1120 aaKnown RBP9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 SUN5Q8TC36 379 aa9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 OR1E3Q8WZA6 343 aa9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 IQCDQ96DY2 449 aa9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 NUDCD1Q96RS6 583 aa9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 CCDC28BQ9BUN5 200 aa9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 BOCQ9BWV1 1114 aa9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 C1QTNF7Q9BXJ2 289 aa9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 FGF22Q9HCT0 170 aa9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 SCHIP1Q9P0W5 487 aaPredicted RBP9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 SIRPGQ9P1W8 387 aa9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 RABGEF1Q9UJ41 708 aa9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 TTC7AQ9ULT0 858 aaPredicted RBP9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 TFR2Q9UP52 801 aa9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 SATB2Q9UPW6 733 aa9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 HYOU1Q9Y4L1 999 aa9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 MYLKQ15746 1914 aa9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 COL27A1Q8IZC6 1860 aaPredicted RBP9.65□□□□□ -0.86
NIF3L1-202ENST00000409020 CFAP73A6NFT4 308 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 NEMP2A6NFY4 417 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 LMO7DNF2Z398 122 aa9.64□□□□□ -0.87
NIF3L1-202ENST00000409020 MT-CO3P00414 261 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms