RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 AGAP2Q99490 1192 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 ZDHHC6Q9H6R6 413 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 INTS10Q9NVR2 710 aaKnown RBP12.9□□□□□ -0.34
RNF43-201ENST00000407977 DNAJB9Q9UBS3 223 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 ZNF490Q9ULM2 529 aaPredicted RBP12.9□□□□□ -0.34
RNF43-201ENST00000407977 OAS3Q9Y6K5 1087 aaKnown RBP12.9□□□□□ -0.34
RNF43-201ENST00000407977 RBM47A0AV96 593 aaKnown RBP12.9□□□□□ -0.34
RNF43-201ENST00000407977 TEX46H3BTG2 121 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 RAP2AP10114 183 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 RGS1Q08116 209 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 SNAPC1Q16533 368 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 HJURPQ8NCD3 748 aaPredicted RBP12.9□□□□□ -0.34
RNF43-201ENST00000407977 C10orf82Q8WW14 230 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 COL26A1Q96A83 441 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 ZFYVE1Q9HBF4 777 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 INTS7Q9NVH2 962 aaKnown RBP12.9□□□□□ -0.34
RNF43-201ENST00000407977 KCTD5Q9NXV2 234 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 UPB1Q9UBR1 384 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 RBMX2Q9Y388 322 aaKnown RBP12.9□□□□□ -0.34
RNF43-201ENST00000407977 ADAMTS13Q76LX8 1427 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 DIP2AQ14689 1571 aa12.9□□□□□ -0.35
RNF43-201ENST00000407977 ACSL4O60488 711 aa12.9□□□□□ -0.35
RNF43-201ENST00000407977 PRPS2P11908 318 aa12.9□□□□□ -0.35
RNF43-201ENST00000407977 ADRA1BP35368 520 aa12.9□□□□□ -0.35
RNF43-201ENST00000407977 TEAD4Q15561 434 aa12.9□□□□□ -0.35
RNF43-201ENST00000407977 PTPN20Q4JDL3 420 aa12.9□□□□□ -0.35
RNF43-201ENST00000407977 LDLRAP1Q5SW96 308 aa12.9□□□□□ -0.35
RNF43-201ENST00000407977 CELF3Q5SZQ8 465 aaKnown RBP12.9□□□□□ -0.35
RNF43-201ENST00000407977 C9orf43Q8TAL5 461 aaPredicted RBP12.9□□□□□ -0.35
RNF43-201ENST00000407977 ZFAND2BQ8WV99 257 aa12.9□□□□□ -0.35
RNF43-201ENST00000407977 KBTBD7Q8WVZ9 684 aa12.9□□□□□ -0.35
RNF43-201ENST00000407977 ANKRA2Q9H9E1 313 aa12.9□□□□□ -0.35
RNF43-201ENST00000407977 EIF2B3Q9NR50 452 aaKnown RBP12.9□□□□□ -0.35
RNF43-201ENST00000407977 NKIRAS2Q9NYR9 191 aa12.9□□□□□ -0.35
RNF43-201ENST00000407977 ZNF780BQ9Y6R6 833 aa12.9□□□□□ -0.35
RNF43-201ENST00000407977 C2orf71A6NGG8 1288 aa12.89□□□□□ -0.35
RNF43-201ENST00000407977 C8BP07358 591 aa12.89□□□□□ -0.35
RNF43-201ENST00000407977 MAGP20916 626 aa12.89□□□□□ -0.35
RNF43-201ENST00000407977 GRM5P41594 1212 aa12.89□□□□□ -0.35
RNF43-201ENST00000407977 MANFP55145 182 aaKnown RBP12.89□□□□□ -0.35
RNF43-201ENST00000407977 C16orf59Q7L2K0 433 aa12.89□□□□□ -0.35
RNF43-201ENST00000407977 GAD1Q99259 594 aa12.89□□□□□ -0.35
RNF43-201ENST00000407977 GBA3Q9H227 469 aa12.89□□□□□ -0.35
RNF43-201ENST00000407977 COQ10BQ9H8M1 238 aa12.89□□□□□ -0.35
RNF43-201ENST00000407977 WASF2Q9Y6W5 498 aa12.89□□□□□ -0.35
RNF43-201ENST00000407977 COL3A1P02461 1466 aaPredicted RBP12.89□□□□□ -0.35
RNF43-201ENST00000407977 IQGAP1P46940 1657 aa12.89□□□□□ -0.35
RNF43-201ENST00000407977 A0A1W2PQ72 361 aa12.89□□□□□ -0.35
RNF43-201ENST00000407977 B4GALT4O60513 344 aa12.89□□□□□ -0.35
RNF43-201ENST00000407977 LRATO95237 230 aa12.89□□□□□ -0.35
RNF43-201ENST00000407977 WEE1P30291 646 aa12.89□□□□□ -0.35
RNF43-201ENST00000407977 MYBPC1Q00872 1141 aa12.89□□□□□ -0.35
RNF43-201ENST00000407977 GPR65Q8IYL9 337 aa12.89□□□□□ -0.35
RNF43-201ENST00000407977 GATA5Q9BWX5 397 aaPredicted RBP12.89□□□□□ -0.35
RNF43-201ENST00000407977 DNAJC11Q9NVH1 559 aa12.89□□□□□ -0.35
RNF43-201ENST00000407977 SEC14L3Q9UDX4 400 aa12.89□□□□□ -0.35
RNF43-201ENST00000407977 CFL2Q9Y281 166 aa12.89□□□□□ -0.35
RNF43-201ENST00000407977 NCKAP1Q9Y2A7 1128 aa12.89□□□□□ -0.35
RNF43-201ENST00000407977 METTL21EPA6NDL7 271 aa12.89□□□□□ -0.35
RNF43-201ENST00000407977 FAM25EA8MYX2 175 aa12.89□□□□□ -0.35
RNF43-201ENST00000407977 PRKD3O94806 890 aa12.89□□□□□ -0.35
RNF43-201ENST00000407977 MPP1Q00013 466 aa12.89□□□□□ -0.35
RNF43-201ENST00000407977 PFKPQ01813 784 aa12.89□□□□□ -0.35
RNF43-201ENST00000407977 MVKQ03426 396 aa12.89□□□□□ -0.35
RNF43-201ENST00000407977 GRM3Q14832 879 aa12.89□□□□□ -0.35
RNF43-201ENST00000407977 PLEKHG6Q3KR16 790 aa12.89□□□□□ -0.35
RNF43-201ENST00000407977 ARSHQ5FYA8 562 aa12.89□□□□□ -0.35
RNF43-201ENST00000407977 TUBA3EQ6PEY2 450 aa12.89□□□□□ -0.35
RNF43-201ENST00000407977 C15orf52Q6ZUT6 534 aaKnown RBP12.89□□□□□ -0.35
RNF43-201ENST00000407977 TTC29Q8NA56 475 aaPredicted RBP12.89□□□□□ -0.35
RNF43-201ENST00000407977 ST6GALNAC4Q9H4F1 302 aa12.89□□□□□ -0.35
RNF43-201ENST00000407977 NECTIN3Q9NQS3 549 aa12.89□□□□□ -0.35
RNF43-201ENST00000407977 GRHL1Q9NZI5 618 aa12.89□□□□□ -0.35
RNF43-201ENST00000407977 OR10H1Q9Y4A9 318 aa12.89□□□□□ -0.35
RNF43-201ENST00000407977 SPATA31A5Q5VU36 1347 aa12.89□□□□□ -0.35
RNF43-201ENST00000407977 SPATA31A7Q8IWB4 1347 aa12.89□□□□□ -0.35
RNF43-201ENST00000407977 XYLBO75191 536 aa12.89□□□□□ -0.35
RNF43-201ENST00000407977 LRCH4O75427 683 aa12.89□□□□□ -0.35
RNF43-201ENST00000407977 SLC25A12O75746 678 aa12.89□□□□□ -0.35
RNF43-201ENST00000407977 DPEP1P16444 411 aa12.89□□□□□ -0.35
RNF43-201ENST00000407977 CXCR3P49682 368 aa12.89□□□□□ -0.35
RNF43-201ENST00000407977 PNLIPRP1P54315 467 aa12.89□□□□□ -0.35
RNF43-201ENST00000407977 MBTD1Q05BQ5 628 aa12.89□□□□□ -0.35
RNF43-201ENST00000407977 XYLT1Q86Y38 959 aa12.89□□□□□ -0.35
RNF43-201ENST00000407977 OR5K1Q8NHB7 308 aa12.89□□□□□ -0.35
RNF43-201ENST00000407977 TSSK3Q96PN8 268 aa12.89□□□□□ -0.35
RNF43-201ENST00000407977 DDX4Q9NQI0 724 aaKnown RBP12.89□□□□□ -0.35
RNF43-201ENST00000407977 ADARB2Q9NS39 739 aaKnown RBP12.89□□□□□ -0.35
RNF43-201ENST00000407977 KERAO60938 352 aa12.88□□□□□ -0.35
RNF43-201ENST00000407977 CLCQ05315 142 aa12.88□□□□□ -0.35
RNF43-201ENST00000407977 PRKD1Q15139 912 aaPredicted RBP12.88□□□□□ -0.35
RNF43-201ENST00000407977 DCST1Q5T197 706 aa12.88□□□□□ -0.35
RNF43-201ENST00000407977 CAPN13Q6MZZ7 669 aaPredicted RBP12.88□□□□□ -0.35
RNF43-201ENST00000407977 CXorf40AQ8TE69 158 aa12.88□□□□□ -0.35
RNF43-201ENST00000407977 STYXQ8WUJ0 223 aa12.88□□□□□ -0.35
RNF43-201ENST00000407977 ANKHQ9HCJ1 492 aa12.88□□□□□ -0.35
RNF43-201ENST00000407977 ABCB9Q9NP78 766 aa12.88□□□□□ -0.35
RNF43-201ENST00000407977 CNTN6Q9UQ52 1028 aa12.88□□□□□ -0.35
RNF43-201ENST00000407977 CHP2O43745 196 aa12.88□□□□□ -0.35
RNF43-201ENST00000407977 ALDH3A2P51648 485 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms