RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 SLC27A5Q9Y2P5 690 aa9.78□□□□□ -0.84
MSH2-202ENST00000406134 TIMM22Q9Y584 194 aa9.78□□□□□ -0.84
MSH2-202ENST00000406134 MTMR11A4FU01 709 aa9.78□□□□□ -0.84
MSH2-202ENST00000406134 UPK1AO00322 258 aa9.78□□□□□ -0.84
MSH2-202ENST00000406134 TRPA1O75762 1119 aa9.78□□□□□ -0.84
MSH2-202ENST00000406134 RSL1D1O76021 490 aaKnown RBP9.78□□□□□ -0.84
MSH2-202ENST00000406134 MYF6P23409 242 aa9.78□□□□□ -0.84
MSH2-202ENST00000406134 VARSP26640 1264 aaKnown RBP9.78□□□□□ -0.84
MSH2-202ENST00000406134 NR1H2P55055 460 aa9.78□□□□□ -0.84
MSH2-202ENST00000406134 RING1Q06587 406 aa9.78□□□□□ -0.84
MSH2-202ENST00000406134 COQ5Q5HYK3 327 aa9.78□□□□□ -0.84
MSH2-202ENST00000406134 CRIPAKQ8N1N5 446 aa9.78□□□□□ -0.84
MSH2-202ENST00000406134 TSPAN14Q8NG11 270 aa9.78□□□□□ -0.84
MSH2-202ENST00000406134 OR7D4Q8NG98 312 aa9.78□□□□□ -0.84
MSH2-202ENST00000406134 BCL7CQ8WUZ0 217 aaPredicted RBP9.78□□□□□ -0.84
MSH2-202ENST00000406134 FBXO44Q9H4M3 255 aa9.78□□□□□ -0.84
MSH2-202ENST00000406134 MARCH2Q9P0N8 246 aa9.78□□□□□ -0.84
MSH2-202ENST00000406134 BCAP29Q9UHQ4 241 aa9.78□□□□□ -0.84
MSH2-202ENST00000406134 ARHGEF37A1IGU5 675 aa9.78□□□□□ -0.84
MSH2-202ENST00000406134 LCHNA4D1U4 455 aa9.78□□□□□ -0.84
MSH2-202ENST00000406134 NPEPPSL1A6NEC2 478 aa9.78□□□□□ -0.84
MSH2-202ENST00000406134 ANKRD28O15084 1053 aa9.78□□□□□ -0.84
MSH2-202ENST00000406134 SEPT4O43236 478 aa9.78□□□□□ -0.84
MSH2-202ENST00000406134 CKBP12277 381 aa9.78□□□□□ -0.84
MSH2-202ENST00000406134 GFAPP14136 432 aa9.78□□□□□ -0.84
MSH2-202ENST00000406134 HGFP14210 728 aa9.78□□□□□ -0.84
MSH2-202ENST00000406134 TACR2P21452 398 aa9.78□□□□□ -0.84
MSH2-202ENST00000406134 OR1E1P30953 314 aa9.78□□□□□ -0.84
MSH2-202ENST00000406134 MAPKAPK2P49137 400 aa9.78□□□□□ -0.84
MSH2-202ENST00000406134 GATMP50440 423 aa9.78□□□□□ -0.84
MSH2-202ENST00000406134 UFM1P61960 85 aa9.78□□□□□ -0.84
MSH2-202ENST00000406134 LCP2Q13094 533 aa9.78□□□□□ -0.84
MSH2-202ENST00000406134 CD200R1Q8TD46 325 aa9.78□□□□□ -0.84
MSH2-202ENST00000406134 GAB3Q8WWW8 586 aa9.78□□□□□ -0.84
MSH2-202ENST00000406134 PHF12Q96QT6 1004 aa9.78□□□□□ -0.84
MSH2-202ENST00000406134 TMEM79Q9BSE2 394 aa9.78□□□□□ -0.84
MSH2-202ENST00000406134 CARS2Q9HA77 564 aaKnown RBP9.78□□□□□ -0.84
MSH2-202ENST00000406134 SEMA4BQ9NPR2 832 aaPredicted RBP9.78□□□□□ -0.84
MSH2-202ENST00000406134 INTS7Q9NVH2 962 aaKnown RBP9.78□□□□□ -0.84
MSH2-202ENST00000406134 INTS10Q9NVR2 710 aaKnown RBP9.78□□□□□ -0.84
MSH2-202ENST00000406134 ACTR3BQ9P1U1 418 aa9.78□□□□□ -0.84
MSH2-202ENST00000406134 MICAL3Q7RTP6 2002 aa9.78□□□□□ -0.84
MSH2-202ENST00000406134 AQP12BA6NM10 295 aa9.77□□□□□ -0.84
MSH2-202ENST00000406134 TNPO2O14787 897 aaKnown RBP9.77□□□□□ -0.84
MSH2-202ENST00000406134 EEDO75530 441 aaKnown RBP9.77□□□□□ -0.84
MSH2-202ENST00000406134 PRAMEF12O95522 483 aa9.77□□□□□ -0.84
MSH2-202ENST00000406134 EFEMP2O95967 443 aa9.77□□□□□ -0.84
MSH2-202ENST00000406134 SELPLGQ14242 412 aa9.77□□□□□ -0.84
MSH2-202ENST00000406134 CYTH1Q15438 398 aa9.77□□□□□ -0.84
MSH2-202ENST00000406134 C18orf21Q32NC0 220 aaPredicted RBP9.77□□□□□ -0.84
MSH2-202ENST00000406134 Q6ZSR9 355 aa9.77□□□□□ -0.84
MSH2-202ENST00000406134 USP51Q70EK9 711 aa9.77□□□□□ -0.84
MSH2-202ENST00000406134 TRIM74Q86UV6 250 aa9.77□□□□□ -0.84
MSH2-202ENST00000406134 TRIM73Q86UV7 250 aa9.77□□□□□ -0.84
MSH2-202ENST00000406134 AQP12AQ8IXF9 295 aa9.77□□□□□ -0.84
MSH2-202ENST00000406134 DCP1BQ8IZD4 617 aaKnown RBP9.77□□□□□ -0.84
MSH2-202ENST00000406134 MIER2Q8N344 545 aa9.77□□□□□ -0.84
MSH2-202ENST00000406134 CBR4Q8N4T8 237 aa9.77□□□□□ -0.84
MSH2-202ENST00000406134 TMEM74Q96NL1 305 aa9.77□□□□□ -0.84
MSH2-202ENST00000406134 HOPXQ9BPY8 73 aaPredicted RBP9.77□□□□□ -0.84
MSH2-202ENST00000406134 TDRD1Q9BXT4 1180 aaKnown RBP9.77□□□□□ -0.84
MSH2-202ENST00000406134 NTN4Q9HB63 628 aa9.77□□□□□ -0.84
MSH2-202ENST00000406134 MRGBPQ9NV56 204 aa9.77□□□□□ -0.84
MSH2-202ENST00000406134 FAM50BQ9Y247 325 aa9.77□□□□□ -0.84
MSH2-202ENST00000406134 CCL27Q9Y4X3 112 aa9.77□□□□□ -0.84
MSH2-202ENST00000406134 TRIM64BA6NI03 449 aa9.77□□□□□ -0.85
MSH2-202ENST00000406134 CLIC3O95833 236 aa9.77□□□□□ -0.85
MSH2-202ENST00000406134 C1RP00736 705 aa9.77□□□□□ -0.85
MSH2-202ENST00000406134 KLKB1P03952 638 aa9.77□□□□□ -0.85
MSH2-202ENST00000406134 NCK1P16333 377 aa9.77□□□□□ -0.85
MSH2-202ENST00000406134 CST5P28325 142 aaPredicted RBP9.77□□□□□ -0.85
MSH2-202ENST00000406134 FMO4P31512 558 aa9.77□□□□□ -0.85
MSH2-202ENST00000406134 KIAA0040Q15053 153 aa9.77□□□□□ -0.85
MSH2-202ENST00000406134 TAS1R1Q7RTX1 841 aa9.77□□□□□ -0.85
MSH2-202ENST00000406134 RIMKLAQ8IXN7 391 aa9.77□□□□□ -0.85
MSH2-202ENST00000406134 RYBPQ8N488 228 aaPredicted RBP9.77□□□□□ -0.85
MSH2-202ENST00000406134 ATP6V0D2Q8N8Y2 350 aa9.77□□□□□ -0.85
MSH2-202ENST00000406134 PROKR1Q8TCW9 393 aa9.77□□□□□ -0.85
MSH2-202ENST00000406134 ESAMQ96AP7 390 aa9.77□□□□□ -0.85
MSH2-202ENST00000406134 EXOC2Q96KP1 924 aa9.77□□□□□ -0.85
MSH2-202ENST00000406134 RPRD1AQ96P16 312 aaPredicted RBP9.77□□□□□ -0.85
MSH2-202ENST00000406134 TCF12Q99081 682 aa9.77□□□□□ -0.85
MSH2-202ENST00000406134 ACOX2Q99424 681 aa9.77□□□□□ -0.85
MSH2-202ENST00000406134 GPR21Q99679 349 aa9.77□□□□□ -0.85
MSH2-202ENST00000406134 RPF2Q9H7B2 306 aaKnown RBP9.77□□□□□ -0.85
MSH2-202ENST00000406134 ZFYVE28Q9HCC9 887 aa9.77□□□□□ -0.85
MSH2-202ENST00000406134 DDX18Q9NVP1 670 aaKnown RBP9.77□□□□□ -0.85
MSH2-202ENST00000406134 A0A1W2PP18 115 aa9.77□□□□□ -0.85
MSH2-202ENST00000406134 GAPDHSO14556 408 aaPredicted RBP9.77□□□□□ -0.85
MSH2-202ENST00000406134 NIPSNAP2O75323 286 aa9.77□□□□□ -0.85
MSH2-202ENST00000406134 BMP10O95393 424 aa9.77□□□□□ -0.85
MSH2-202ENST00000406134 NDST3O95803 873 aa9.77□□□□□ -0.85
MSH2-202ENST00000406134 GSK3BP49841 420 aa9.77□□□□□ -0.85
MSH2-202ENST00000406134 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.77□□□□□ -0.85
MSH2-202ENST00000406134 CYBRD1Q53TN4 286 aa9.77□□□□□ -0.85
MSH2-202ENST00000406134 RTP2Q5QGT7 225 aa9.77□□□□□ -0.85
MSH2-202ENST00000406134 DLEU7Q6UYE1 221 aa9.77□□□□□ -0.85
MSH2-202ENST00000406134 FAM47BQ8NA70 645 aa9.77□□□□□ -0.85
MSH2-202ENST00000406134 SIDT2Q8NBJ9 832 aaKnown RBP9.77□□□□□ -0.85
MSH2-202ENST00000406134 OR4K2Q8NGD2 314 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms