RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 A6NCN8 305 aa15.21■□□□□ 0.03
TPM1-207ENST00000403994 K7ENP7 123 aa15.21■□□□□ 0.03
TPM1-207ENST00000403994 HGSO14964 777 aaPredicted RBP15.21■□□□□ 0.03
TPM1-207ENST00000403994 ZW10O43264 779 aa15.21■□□□□ 0.03
TPM1-207ENST00000403994 PMPCBO75439 489 aa15.21■□□□□ 0.03
TPM1-207ENST00000403994 NDST3O95803 873 aa15.21■□□□□ 0.03
TPM1-207ENST00000403994 CD68P34810 354 aaPredicted RBP15.21■□□□□ 0.03
TPM1-207ENST00000403994 RHDQ02161 417 aa15.21■□□□□ 0.03
TPM1-207ENST00000403994 CFHR1Q03591 330 aa15.21■□□□□ 0.03
TPM1-207ENST00000403994 WASHC5Q12768 1159 aa15.21■□□□□ 0.03
TPM1-207ENST00000403994 NKAIN2Q5VXU1 208 aa15.21■□□□□ 0.03
TPM1-207ENST00000403994 INO80CQ6PI98 192 aaPredicted RBP15.21■□□□□ 0.03
TPM1-207ENST00000403994 USP53Q70EK8 1073 aa15.21■□□□□ 0.03
TPM1-207ENST00000403994 BZW1Q7L1Q6 419 aaKnown RBP15.21■□□□□ 0.03
TPM1-207ENST00000403994 CHST15Q7LFX5 561 aaPredicted RBP15.21■□□□□ 0.03
TPM1-207ENST00000403994 ZNF761Q86XN6 746 aaPredicted RBP15.21■□□□□ 0.03
TPM1-207ENST00000403994 LSM14AQ8ND56 463 aaKnown RBP15.21■□□□□ 0.03
TPM1-207ENST00000403994 OR4D9Q8NGE8 314 aa15.21■□□□□ 0.03
TPM1-207ENST00000403994 HAUS1Q96CS2 278 aa15.21■□□□□ 0.03
TPM1-207ENST00000403994 QKIQ96PU8 341 aaKnown RBP eCLIP15.21■□□□□ 0.034e-9■■■■■ 47.8
TPM1-207ENST00000403994 CARD9Q9H257 536 aa15.21■□□□□ 0.03
TPM1-207ENST00000403994 RMI1Q9H9A7 625 aa15.21■□□□□ 0.03
TPM1-207ENST00000403994 ARFGAP3Q9NP61 516 aa15.21■□□□□ 0.03
TPM1-207ENST00000403994 UBP1Q9NZI7 540 aa15.21■□□□□ 0.03
TPM1-207ENST00000403994 TBC1D29Q9UFV1 150 aa15.21■□□□□ 0.03
TPM1-207ENST00000403994 SPO11Q9Y5K1 396 aa15.21■□□□□ 0.03
TPM1-207ENST00000403994 ADGRG1Q9Y653 693 aa15.21■□□□□ 0.03
TPM1-207ENST00000403994 C9orf172C9J069 976 aa15.2■□□□□ 0.02
TPM1-207ENST00000403994 NUAK1O60285 661 aa15.2■□□□□ 0.02
TPM1-207ENST00000403994 THRAP10827 490 aa15.2■□□□□ 0.02
TPM1-207ENST00000403994 LIPCP11150 499 aa15.2■□□□□ 0.02
TPM1-207ENST00000403994 NFKB1P19838 968 aa15.2■□□□□ 0.02
TPM1-207ENST00000403994 LIMK2P53671 638 aa15.2■□□□□ 0.02
TPM1-207ENST00000403994 MAPK10P53779 464 aa15.2■□□□□ 0.02
TPM1-207ENST00000403994 GPLD1P80108 840 aa15.2■□□□□ 0.02
TPM1-207ENST00000403994 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.2■□□□□ 0.02
TPM1-207ENST00000403994 PDPK2PQ6A1A2 396 aa15.2■□□□□ 0.02
TPM1-207ENST00000403994 KDELC1Q6UW63 502 aa15.2■□□□□ 0.02
TPM1-207ENST00000403994 CCDC81Q6ZN84 652 aa15.2■□□□□ 0.02
TPM1-207ENST00000403994 TMC3Q7Z5M5 1100 aa15.2■□□□□ 0.02
TPM1-207ENST00000403994 ZC3H18Q86VM9 953 aaKnown RBP15.2■□□□□ 0.02
TPM1-207ENST00000403994 PHYKPLQ8IUZ5 450 aa15.2■□□□□ 0.02
TPM1-207ENST00000403994 CCDC50Q8IVM0 306 aa15.2■□□□□ 0.02
TPM1-207ENST00000403994 CCDC170Q8IYT3 715 aa15.2■□□□□ 0.02
TPM1-207ENST00000403994 TRAM1L1Q8N609 369 aa15.2■□□□□ 0.02
TPM1-207ENST00000403994 KRT35Q92764 455 aa15.2■□□□□ 0.02
TPM1-207ENST00000403994 CCNL2Q96S94 520 aaPredicted RBP15.2■□□□□ 0.02
TPM1-207ENST00000403994 HERPUD2Q9BSE4 406 aa15.2■□□□□ 0.02
TPM1-207ENST00000403994 GPR63Q9BZJ6 419 aa15.2■□□□□ 0.02
TPM1-207ENST00000403994 ZMYND15Q9H091 742 aa15.2■□□□□ 0.02
TPM1-207ENST00000403994 OR2AG1Q9H205 316 aa15.2■□□□□ 0.02
TPM1-207ENST00000403994 RAD18Q9NS91 495 aa15.2■□□□□ 0.02
TPM1-207ENST00000403994 TMEM9Q9P0T7 183 aa15.2■□□□□ 0.02
TPM1-207ENST00000403994 ATXN10Q9UBB4 475 aa15.2■□□□□ 0.02
TPM1-207ENST00000403994 PCDHA13Q9Y5I0 950 aa15.2■□□□□ 0.02
TPM1-207ENST00000403994 TRBV23OR9-2A0A075B6M9 112 aa15.19■□□□□ 0.02
TPM1-207ENST00000403994 GPR89AB7ZAQ6 455 aa15.19■□□□□ 0.02
TPM1-207ENST00000403994 F5H423 210 aaPredicted RBP15.19■□□□□ 0.02
TPM1-207ENST00000403994 AURKAO14965 403 aa15.19■□□□□ 0.02
TPM1-207ENST00000403994 MTSS1O43312 755 aa15.19■□□□□ 0.02
TPM1-207ENST00000403994 GRID2O43424 1007 aa15.19■□□□□ 0.02
TPM1-207ENST00000403994 DUX1O43812 170 aa15.19■□□□□ 0.02
TPM1-207ENST00000403994 GPR89BP0CG08 455 aa15.19■□□□□ 0.02
TPM1-207ENST00000403994 CCL4P13236 92 aa15.19■□□□□ 0.02
TPM1-207ENST00000403994 F3P13726 295 aa15.19■□□□□ 0.02
TPM1-207ENST00000403994 ZNF8P17098 575 aaPredicted RBP15.19■□□□□ 0.02
TPM1-207ENST00000403994 BPIP17213 487 aa15.19■□□□□ 0.02
TPM1-207ENST00000403994 CYLC1P35663 651 aaPredicted RBP15.19■□□□□ 0.02
TPM1-207ENST00000403994 HHEXQ03014 270 aa15.19■□□□□ 0.02
TPM1-207ENST00000403994 SRSF6Q13247 344 aaKnown RBP15.19■□□□□ 0.02
TPM1-207ENST00000403994 SQSTM1Q13501 440 aa15.19■□□□□ 0.02
TPM1-207ENST00000403994 TRA2AQ13595 282 aaKnown RBP eCLIP15.19■□□□□ 0.02
TPM1-207ENST00000403994 NOMO1Q15155 1222 aa15.19■□□□□ 0.02
TPM1-207ENST00000403994 SPA17Q15506 151 aa15.19■□□□□ 0.02
TPM1-207ENST00000403994 TGIF1Q15583 401 aa15.19■□□□□ 0.02
TPM1-207ENST00000403994 PPP2R5EQ16537 467 aa15.19■□□□□ 0.02
TPM1-207ENST00000403994 ZNF648Q5T619 568 aaPredicted RBP15.19■□□□□ 0.02
TPM1-207ENST00000403994 CRTC3Q6UUV7 619 aa15.19■□□□□ 0.02
TPM1-207ENST00000403994 TTC9Q92623 222 aa15.19■□□□□ 0.02
TPM1-207ENST00000403994 P3H4Q92791 437 aa15.19■□□□□ 0.02
TPM1-207ENST00000403994 USP7Q93009 1102 aa15.19■□□□□ 0.02
TPM1-207ENST00000403994 GLYATL1Q969I3 302 aa15.19■□□□□ 0.02
TPM1-207ENST00000403994 PMEPA1Q969W9 287 aa15.19■□□□□ 0.02
TPM1-207ENST00000403994 RBM41Q96IZ5 413 aaKnown RBP15.19■□□□□ 0.02
TPM1-207ENST00000403994 SARS2Q9NP81 518 aaKnown RBP15.19■□□□□ 0.02
TPM1-207ENST00000403994 AKAP7Q9P0M2 348 aaPredicted RBP15.19■□□□□ 0.02
TPM1-207ENST00000403994 KLHL8Q9P2G9 620 aaPredicted RBP15.19■□□□□ 0.02
TPM1-207ENST00000403994 FAM153AQ9UHL3 310 aa15.19■□□□□ 0.02
TPM1-207ENST00000403994 BSNQ9UPA5 3926 aa15.19■□□□□ 0.02
TPM1-207ENST00000403994 RCCD1A6NED2 376 aa15.18■□□□□ 0.02
TPM1-207ENST00000403994 SOWAHDA6NJG2 315 aa15.18■□□□□ 0.02
TPM1-207ENST00000403994 ZRANB2O95218 330 aaKnown RBP eCLIP15.18■□□□□ 0.02
TPM1-207ENST00000403994 SLC25A14O95258 325 aaPredicted RBP15.18■□□□□ 0.02
TPM1-207ENST00000403994 SLC2A4P14672 509 aa15.18■□□□□ 0.02
TPM1-207ENST00000403994 FECHP22830 423 aa15.18■□□□□ 0.02
TPM1-207ENST00000403994 MPSTP25325 297 aa15.18■□□□□ 0.02
TPM1-207ENST00000403994 ZNF75DP51815 510 aa15.18■□□□□ 0.02
TPM1-207ENST00000403994 WNT3AP56704 352 aa15.18■□□□□ 0.02
TPM1-207ENST00000403994 PLA2G4EQ3MJ16 856 aa15.18■□□□□ 0.02
TPM1-207ENST00000403994 KHDC1Q4VXA5 237 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms