RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 FADS3Q9Y5Q0 445 aa19.71■□□□□ 0.75
CCDC47-202ENST00000403162 MRPL42Q9Y6G3 142 aaKnown RBP19.71■□□□□ 0.75
CCDC47-202ENST00000403162 TRIM64BA6NI03 449 aa19.71■□□□□ 0.75
CCDC47-202ENST00000403162 SIX3O95343 332 aaPredicted RBP19.71■□□□□ 0.75
CCDC47-202ENST00000403162 SLC2A3P11169 496 aa19.71■□□□□ 0.75
CCDC47-202ENST00000403162 MTHFD2P13995 350 aa19.71■□□□□ 0.75
CCDC47-202ENST00000403162 HGFP14210 728 aa19.71■□□□□ 0.75
CCDC47-202ENST00000403162 YBX1P67809 324 aaKnown RBP19.71■□□□□ 0.75
CCDC47-202ENST00000403162 ACVR1Q04771 509 aa19.71■□□□□ 0.75
CCDC47-202ENST00000403162 OR4D1Q15615 310 aa19.71■□□□□ 0.75
CCDC47-202ENST00000403162 ZNF549Q6P9A3 640 aa19.71■□□□□ 0.75
CCDC47-202ENST00000403162 ZNF354CQ86Y25 554 aa19.71■□□□□ 0.75
CCDC47-202ENST00000403162 TMEM199Q8N511 208 aa19.71■□□□□ 0.75
CCDC47-202ENST00000403162 TADA1Q96BN2 335 aa19.71■□□□□ 0.75
CCDC47-202ENST00000403162 TUBGCP3Q96CW5 907 aa19.71■□□□□ 0.75
CCDC47-202ENST00000403162 FBXL20Q96IG2 436 aa19.71■□□□□ 0.75
CCDC47-202ENST00000403162 PAAF1Q9BRP4 392 aa19.71■□□□□ 0.75
CCDC47-202ENST00000403162 RPF2Q9H7B2 306 aaKnown RBP19.71■□□□□ 0.75
CCDC47-202ENST00000403162 SMPD3Q9NY59 655 aaPredicted RBP19.71■□□□□ 0.75
CCDC47-202ENST00000403162 CRYL1Q9Y2S2 319 aa19.71■□□□□ 0.75
CCDC47-202ENST00000403162 NLRC5Q86WI3 1866 aa19.71■□□□□ 0.75
CCDC47-202ENST00000403162 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.7■□□□□ 0.74
CCDC47-202ENST00000403162 KANSL1LA0AUZ9 987 aa19.7■□□□□ 0.74
CCDC47-202ENST00000403162 OR51F1A6NGY5 319 aa19.7■□□□□ 0.74
CCDC47-202ENST00000403162 CASTOR2A6NHX0 329 aa19.7■□□□□ 0.74
CCDC47-202ENST00000403162 H3BMQ9 156 aa19.7■□□□□ 0.74
CCDC47-202ENST00000403162 UBXN8O00124 270 aa19.7■□□□□ 0.74
CCDC47-202ENST00000403162 CCL22O00626 93 aa19.7■□□□□ 0.74
CCDC47-202ENST00000403162 EI24O14681 340 aa19.7■□□□□ 0.74
CCDC47-202ENST00000403162 LDB2O43679 373 aa19.7■□□□□ 0.74
CCDC47-202ENST00000403162 CLASP2O75122 1294 aaKnown RBP19.7■□□□□ 0.74
CCDC47-202ENST00000403162 SEC24DO94855 1032 aaPredicted RBP19.7■□□□□ 0.74
CCDC47-202ENST00000403162 CYP11A1P05108 521 aa19.7■□□□□ 0.74
CCDC47-202ENST00000403162 UMPSP11172 480 aa19.7■□□□□ 0.74
CCDC47-202ENST00000403162 ZNF37AP17032 561 aaPredicted RBP19.7■□□□□ 0.74
CCDC47-202ENST00000403162 CHRM3P20309 590 aa19.7■□□□□ 0.74
CCDC47-202ENST00000403162 VARSP26640 1264 aaKnown RBP19.7■□□□□ 0.74
CCDC47-202ENST00000403162 HMOX2P30519 316 aa19.7■□□□□ 0.74
CCDC47-202ENST00000403162 GSK3BP49841 420 aa19.7■□□□□ 0.74
CCDC47-202ENST00000403162 MLLT6P55198 1093 aaPredicted RBP19.7■□□□□ 0.74
CCDC47-202ENST00000403162 MAXP61244 160 aa19.7■□□□□ 0.74
CCDC47-202ENST00000403162 DSC2Q02487 901 aa19.7■□□□□ 0.74
CCDC47-202ENST00000403162 ITKQ08881 620 aa19.7■□□□□ 0.74
CCDC47-202ENST00000403162 PMS2P3Q13401 168 aa19.7■□□□□ 0.74
CCDC47-202ENST00000403162 IHHQ14623 411 aa19.7■□□□□ 0.74
CCDC47-202ENST00000403162 RPS6KA2Q15349 733 aa19.7■□□□□ 0.74
CCDC47-202ENST00000403162 CYP51A1Q16850 503 aa19.7■□□□□ 0.74
CCDC47-202ENST00000403162 SIRPB2Q5JXA9 342 aa19.7■□□□□ 0.74
CCDC47-202ENST00000403162 CLLU1OSQ5K130 101 aa19.7■□□□□ 0.74
CCDC47-202ENST00000403162 MARC1Q5VT66 337 aa19.7■□□□□ 0.74
CCDC47-202ENST00000403162 OGFOD2Q6N063 350 aa19.7■□□□□ 0.74
CCDC47-202ENST00000403162 METTL23Q86XA0 190 aa19.7■□□□□ 0.74
CCDC47-202ENST00000403162 DHRSXQ8N5I4 330 aa19.7■□□□□ 0.74
CCDC47-202ENST00000403162 GPR150Q8NGU9 434 aa19.7■□□□□ 0.74
CCDC47-202ENST00000403162 VWCEQ96DN2 955 aa19.7■□□□□ 0.74
CCDC47-202ENST00000403162 C1orf74Q96LT6 269 aa19.7■□□□□ 0.74
CCDC47-202ENST00000403162 COG8Q96MW5 612 aa19.7■□□□□ 0.74
CCDC47-202ENST00000403162 ATOH8Q96SQ7 321 aa19.7■□□□□ 0.74
CCDC47-202ENST00000403162 TFB2MQ9H5Q4 396 aaKnown RBP19.7■□□□□ 0.74
CCDC47-202ENST00000403162 PRKAG2Q9UGJ0 569 aa19.7■□□□□ 0.74
CCDC47-202ENST00000403162 GPR45Q9Y5Y3 372 aa19.7■□□□□ 0.74
CCDC47-202ENST00000403162 A0A1W2PP18 115 aa19.7■□□□□ 0.74
CCDC47-202ENST00000403162 LRRC14BA6NHZ5 514 aa19.7■□□□□ 0.74
CCDC47-202ENST00000403162 ATE1O95260 518 aa19.7■□□□□ 0.74
CCDC47-202ENST00000403162 MOCS2O96007 188 aaPredicted RBP19.7■□□□□ 0.74
CCDC47-202ENST00000403162 SLC4A1P02730 911 aa19.7■□□□□ 0.74
CCDC47-202ENST00000403162 TNK2Q07912 1038 aa19.7■□□□□ 0.74
CCDC47-202ENST00000403162 GRIK2Q13002 908 aa19.7■□□□□ 0.74
CCDC47-202ENST00000403162 C16orf72Q14CZ0 275 aa19.7■□□□□ 0.74
CCDC47-202ENST00000403162 PFKFB4Q16877 469 aa19.7■□□□□ 0.74
CCDC47-202ENST00000403162 CYBRD1Q53TN4 286 aa19.7■□□□□ 0.74
CCDC47-202ENST00000403162 TBC1D21Q8IYX1 336 aa19.7■□□□□ 0.74
CCDC47-202ENST00000403162 NSUN5Q96P11 429 aaKnown RBP19.7■□□□□ 0.74
CCDC47-202ENST00000403162 DCUN1D5Q9BTE7 237 aa19.7■□□□□ 0.74
CCDC47-202ENST00000403162 ALG2Q9H553 416 aa19.7■□□□□ 0.74
CCDC47-202ENST00000403162 ELAC1Q9H777 363 aaKnown RBP19.7■□□□□ 0.74
CCDC47-202ENST00000403162 INTS10Q9NVR2 710 aaKnown RBP19.7■□□□□ 0.74
CCDC47-202ENST00000403162 ZFC3H1O60293 1989 aaKnown RBP19.69■□□□□ 0.74
CCDC47-202ENST00000403162 C9JVG2 144 aa19.69■□□□□ 0.74
CCDC47-202ENST00000403162 INPP4BO15327 924 aa19.69■□□□□ 0.74
CCDC47-202ENST00000403162 ZSCAN9O15535 394 aaPredicted RBP19.69■□□□□ 0.74
CCDC47-202ENST00000403162 ATXN1LP0C7T5 689 aaKnown RBP19.69■□□□□ 0.74
CCDC47-202ENST00000403162 PGFP49763 221 aa19.69■□□□□ 0.74
CCDC47-202ENST00000403162 SLC5A3P53794 718 aa19.69■□□□□ 0.74
CCDC47-202ENST00000403162 SLC10A7Q0GE19 358 aa19.69■□□□□ 0.74
CCDC47-202ENST00000403162 RCAN2Q14206 197 aa19.69■□□□□ 0.74
CCDC47-202ENST00000403162 RAB39AQ14964 217 aa19.69■□□□□ 0.74
CCDC47-202ENST00000403162 USP51Q70EK9 711 aa19.69■□□□□ 0.74
CCDC47-202ENST00000403162 SPATA19Q7Z5L4 167 aa19.69■□□□□ 0.74
CCDC47-202ENST00000403162 SCD5Q86SK9 330 aa19.69■□□□□ 0.74
CCDC47-202ENST00000403162 TEX26Q8N6G2 289 aa19.69■□□□□ 0.74
CCDC47-202ENST00000403162 PEX13Q92968 403 aa19.69■□□□□ 0.74
CCDC47-202ENST00000403162 PLEKHG4BQ96PX9 1271 aa19.69■□□□□ 0.74
CCDC47-202ENST00000403162 KCNA7Q96RP8 456 aa19.69■□□□□ 0.74
CCDC47-202ENST00000403162 ZNF639Q9UID6 485 aa19.69■□□□□ 0.74
CCDC47-202ENST00000403162 OAS3Q9Y6K5 1087 aaKnown RBP19.69■□□□□ 0.74
CCDC47-202ENST00000403162 DOCK4Q8N1I0 1966 aa19.69■□□□□ 0.74
CCDC47-202ENST00000403162 ANKRD36A6QL64 1941 aa19.69■□□□□ 0.74
CCDC47-202ENST00000403162 LOC285095A0A1B0GVY8 99 aa19.68■□□□□ 0.74
CCDC47-202ENST00000403162 TYW5A2RUC4 315 aaKnown RBP19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms