RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 GM2AP17900 193 aa12.17□□□□□ -0.46
CLIP4-203ENST00000401617 PPARGP37231 505 aaPredicted RBP12.17□□□□□ -0.46
CLIP4-203ENST00000401617 GPM6BQ13491 265 aa12.17□□□□□ -0.46
CLIP4-203ENST00000401617 GPR33Q49SQ1 333 aa12.17□□□□□ -0.46
CLIP4-203ENST00000401617 FAM109BQ6ICB4 259 aaPredicted RBP12.17□□□□□ -0.46
CLIP4-203ENST00000401617 UGT3A1Q6NUS8 523 aa12.17□□□□□ -0.46
CLIP4-203ENST00000401617 FAM151BQ6UXP7 276 aa12.17□□□□□ -0.46
CLIP4-203ENST00000401617 RPS27LQ71UM5 84 aaKnown RBP12.17□□□□□ -0.46
CLIP4-203ENST00000401617 SIDT2Q8NBJ9 832 aaKnown RBP12.17□□□□□ -0.46
CLIP4-203ENST00000401617 ITFG1Q8TB96 612 aa12.17□□□□□ -0.46
CLIP4-203ENST00000401617 ACTRT2Q8TDY3 377 aa12.17□□□□□ -0.46
CLIP4-203ENST00000401617 AGAP11Q8TF27 550 aa12.17□□□□□ -0.46
CLIP4-203ENST00000401617 FRS2Q8WU20 508 aa12.17□□□□□ -0.46
CLIP4-203ENST00000401617 FUBP1Q96AE4 644 aaKnown RBP12.17□□□□□ -0.46
CLIP4-203ENST00000401617 MRGPRX3Q96LB0 322 aa12.17□□□□□ -0.46
CLIP4-203ENST00000401617 LRRC3BQ96PB8 259 aa12.17□□□□□ -0.46
CLIP4-203ENST00000401617 ERVW-1Q9UQF0 538 aa12.17□□□□□ -0.46
CLIP4-203ENST00000401617 MRPS23Q9Y3D9 190 aaKnown RBP12.17□□□□□ -0.46
CLIP4-203ENST00000401617 WNT6Q9Y6F9 365 aa12.17□□□□□ -0.46
CLIP4-203ENST00000401617 CHD9Q3L8U1 2897 aa12.17□□□□□ -0.46
CLIP4-203ENST00000401617 ECI2O75521 394 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 CA3P07451 260 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 CISD3P0C7P0 127 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 ZNF7P17097 686 aaPredicted RBP12.16□□□□□ -0.46
CLIP4-203ENST00000401617 CCND1P24385 295 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 COPAP53621 1224 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 IL2P60568 153 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 NAA20P61599 178 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 BTKQ06187 659 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 PDCD2Q16342 344 aaPredicted RBP12.16□□□□□ -0.46
CLIP4-203ENST00000401617 CHSY3Q70JA7 882 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 TSPAN33Q86UF1 283 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 AHI1Q8N157 1196 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 ARHGAP24Q8N264 748 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 CELF5Q8N6W0 485 aaKnown RBP12.16□□□□□ -0.46
CLIP4-203ENST00000401617 OR2A12Q8NGT7 310 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 ING5Q8WYH8 240 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 ASB8Q9H765 288 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 GTSE1Q9NYZ3 720 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 TMCO1Q9UM00 188 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 FNDC3AQ9Y2H6 1198 aaKnown RBP12.16□□□□□ -0.46
CLIP4-203ENST00000401617 TRAF6Q9Y4K3 522 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 GLYATL1P3A0A0U1RQE8 302 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 SYCE1LA8MT33 242 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 STX16-NPEPL1H3BU86 382 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 CDC7O00311 574 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 NEMP1O14524 444 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 STX16O14662 325 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 PEX11AO75192 247 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 TM7SF2O76062 418 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 SUPT7LO94864 414 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 COX4I1P13073 169 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 ITGALP20701 1170 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 ACRV1P26436 265 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 PGM1P36871 562 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 SPAM1P38567 509 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 PTSQ03393 145 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 CBX2Q14781 532 aaPredicted RBP12.16□□□□□ -0.46
CLIP4-203ENST00000401617 DHCR24Q15392 516 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 TSNQ15631 228 aaKnown RBP12.16□□□□□ -0.46
CLIP4-203ENST00000401617 CHRNA6Q15825 494 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 UGT3A2Q3SY77 523 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 CYHR1Q6ZMK1 362 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 USP45Q70EL2 814 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 RAB44Q7Z6P3 723 aaPredicted RBP12.16□□□□□ -0.46
CLIP4-203ENST00000401617 ADGRD2Q7Z7M1 963 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 RBFAQ8N0V3 343 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 AFAP1L2Q8N4X5 818 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 POU5F2Q8N7G0 328 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 CHST14Q8NCH0 376 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 CEP70Q8NHQ1 597 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 EEF1AKMT1Q8WVE0 214 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 MCUR1Q96AQ8 359 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 CCDC97Q96F63 343 aaPredicted RBP12.16□□□□□ -0.46
CLIP4-203ENST00000401617 TTC1Q99614 292 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 LBHD1Q9BQE6 289 aaPredicted RBP12.16□□□□□ -0.46
CLIP4-203ENST00000401617 RNF112Q9ULX5 631 aa12.16□□□□□ -0.46
CLIP4-203ENST00000401617 GOLGA8CPA6NN73 597 aa12.15□□□□□ -0.46
CLIP4-203ENST00000401617 TRIM24O15164 1050 aa12.15□□□□□ -0.46
CLIP4-203ENST00000401617 HOXC11O43248 304 aaPredicted RBP12.15□□□□□ -0.46
CLIP4-203ENST00000401617 CDK14O94921 469 aa12.15□□□□□ -0.46
CLIP4-203ENST00000401617 SIX3O95343 332 aaPredicted RBP12.15□□□□□ -0.46
CLIP4-203ENST00000401617 RPS17P08708 135 aaKnown RBP12.15□□□□□ -0.46
CLIP4-203ENST00000401617 POLR2EP19388 210 aaKnown RBP12.15□□□□□ -0.46
CLIP4-203ENST00000401617 CHRM3P20309 590 aa12.15□□□□□ -0.46
CLIP4-203ENST00000401617 SH3BP2P78314 561 aa12.15□□□□□ -0.46
CLIP4-203ENST00000401617 HERC3Q15034 1050 aa12.15□□□□□ -0.46
CLIP4-203ENST00000401617 PFKFB4Q16877 469 aa12.15□□□□□ -0.46
CLIP4-203ENST00000401617 ACCSLQ4AC99 568 aa12.15□□□□□ -0.46
CLIP4-203ENST00000401617 C9orf50Q5SZB4 431 aa12.15□□□□□ -0.46
CLIP4-203ENST00000401617 MACC1Q6ZN28 852 aa12.15□□□□□ -0.46
CLIP4-203ENST00000401617 Q6ZVU0 165 aa12.15□□□□□ -0.46
CLIP4-203ENST00000401617 PELI3Q8N2H9 469 aa12.15□□□□□ -0.46
CLIP4-203ENST00000401617 GPR26Q8NDV2 337 aa12.15□□□□□ -0.46
CLIP4-203ENST00000401617 RSPRY1Q96DX4 576 aa12.15□□□□□ -0.46
CLIP4-203ENST00000401617 LINGO1Q96FE5 620 aa12.15□□□□□ -0.46
CLIP4-203ENST00000401617 ZDHHC6Q9H6R6 413 aa12.15□□□□□ -0.46
CLIP4-203ENST00000401617 KIF26AQ9ULI4 1882 aaPredicted RBP12.15□□□□□ -0.46
CLIP4-203ENST00000401617 TSPAN11A1L157 253 aa12.15□□□□□ -0.47
CLIP4-203ENST00000401617 NPEPPSL1A6NEC2 478 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms