RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 DRC3Q9H069 523 aa25.43■■□□□ 1.66
CPNE1-205ENST00000401607 PNPOQ9NVS9 261 aa25.43■■□□□ 1.66
CPNE1-205ENST00000401607 KCNK4Q9NYG8 393 aa25.43■■□□□ 1.66
CPNE1-205ENST00000401607 A8MT66 165 aa25.42■■□□□ 1.66
CPNE1-205ENST00000401607 IQCF5A8MTL0 148 aa25.42■■□□□ 1.66
CPNE1-205ENST00000401607 UBOX5O94941 541 aa25.42■■□□□ 1.66
CPNE1-205ENST00000401607 KAT7O95251 611 aa25.42■■□□□ 1.66
CPNE1-205ENST00000401607 PRNPP04156 253 aa25.42■■□□□ 1.66
CPNE1-205ENST00000401607 METAP1P53582 386 aa25.42■■□□□ 1.66
CPNE1-205ENST00000401607 DNAJB13P59910 316 aa25.42■■□□□ 1.66
CPNE1-205ENST00000401607 COL19A1Q14993 1142 aa25.42■■□□□ 1.66
CPNE1-205ENST00000401607 ITPRIPL2Q3MIP1 535 aa25.42■■□□□ 1.66
CPNE1-205ENST00000401607 GALNTL6Q49A17 601 aa25.42■■□□□ 1.66
CPNE1-205ENST00000401607 ZDHHC20Q5W0Z9 365 aa25.42■■□□□ 1.66
CPNE1-205ENST00000401607 DPPA4Q7L190 304 aa25.42■■□□□ 1.66
CPNE1-205ENST00000401607 HSD11B1LQ7Z5J1 315 aa25.42■■□□□ 1.66
CPNE1-205ENST00000401607 DERL2Q9GZP9 239 aa25.42■■□□□ 1.66
CPNE1-205ENST00000401607 TTYH1Q9H313 450 aaPredicted RBP25.42■■□□□ 1.66
CPNE1-205ENST00000401607 PKD2L2Q9NZM6 624 aa25.42■■□□□ 1.66
CPNE1-205ENST00000401607 TRMT6Q9UJA5 497 aaKnown RBP25.42■■□□□ 1.66
CPNE1-205ENST00000401607 PRSS21Q9Y6M0 314 aa25.42■■□□□ 1.66
CPNE1-205ENST00000401607 NUMBLQ9Y6R0 609 aa25.42■■□□□ 1.66
CPNE1-205ENST00000401607 PLXNB3Q9ULL4 1909 aa25.42■■□□□ 1.66
CPNE1-205ENST00000401607 KPNA3O00505 521 aaPredicted RBP25.41■■□□□ 1.66
CPNE1-205ENST00000401607 DCTN3O75935 186 aa25.41■■□□□ 1.66
CPNE1-205ENST00000401607 HSPA4LO95757 839 aa25.41■■□□□ 1.66
CPNE1-205ENST00000401607 IL12RB1P42701 662 aa25.41■■□□□ 1.66
CPNE1-205ENST00000401607 CLCN7P51798 805 aa25.41■■□□□ 1.66
CPNE1-205ENST00000401607 ADGRE1Q14246 886 aa25.41■■□□□ 1.66
CPNE1-205ENST00000401607 OR4D1Q15615 310 aa25.41■■□□□ 1.66
CPNE1-205ENST00000401607 ATP13A5Q4VNC0 1218 aa25.41■■□□□ 1.66
CPNE1-205ENST00000401607 SERPINA13PQ6UXR4 307 aa25.41■■□□□ 1.66
CPNE1-205ENST00000401607 NAT14Q8WUY8 206 aa25.41■■□□□ 1.66
CPNE1-205ENST00000401607 UCMAQ8WVF2 138 aa25.41■■□□□ 1.66
CPNE1-205ENST00000401607 OR8D1Q8WZ84 308 aa25.41■■□□□ 1.66
CPNE1-205ENST00000401607 CLPBQ9H078 707 aa25.41■■□□□ 1.66
CPNE1-205ENST00000401607 TFB2MQ9H5Q4 396 aaKnown RBP25.41■■□□□ 1.66
CPNE1-205ENST00000401607 THAP10Q9P2Z0 257 aaPredicted RBP25.41■■□□□ 1.66
CPNE1-205ENST00000401607 IKZF3Q9UKT9 509 aa25.41■■□□□ 1.66
CPNE1-205ENST00000401607 PPM1HQ9ULR3 514 aa25.41■■□□□ 1.66
CPNE1-205ENST00000401607 TSPAN12O95859 305 aa25.41■■□□□ 1.66
CPNE1-205ENST00000401607 CHRNGP07510 517 aa25.41■■□□□ 1.66
CPNE1-205ENST00000401607 CHRM3P20309 590 aa25.41■■□□□ 1.66
CPNE1-205ENST00000401607 CCR10P46092 362 aa25.41■■□□□ 1.66
CPNE1-205ENST00000401607 AQP5P55064 265 aa25.41■■□□□ 1.66
CPNE1-205ENST00000401607 RCN2Q14257 317 aa25.41■■□□□ 1.66
CPNE1-205ENST00000401607 GRIN2CQ14957 1233 aa25.41■■□□□ 1.66
CPNE1-205ENST00000401607 SMRP1Q8NCR6 262 aa25.41■■□□□ 1.66
CPNE1-205ENST00000401607 TMIEQ8NEW7 156 aa25.41■■□□□ 1.66
CPNE1-205ENST00000401607 FAM129BQ96TA1 746 aa25.41■■□□□ 1.66
CPNE1-205ENST00000401607 MYLK2Q9H1R3 596 aa25.41■■□□□ 1.66
CPNE1-205ENST00000401607 ZDHHC4Q9NPG8 344 aa25.41■■□□□ 1.66
CPNE1-205ENST00000401607 CD84Q9UIB8 345 aa25.41■■□□□ 1.66
CPNE1-205ENST00000401607 E5RI56 91 aa25.4■■□□□ 1.66
CPNE1-205ENST00000401607 XPAP23025 273 aaPredicted RBP25.4■■□□□ 1.66
CPNE1-205ENST00000401607 NFKBIAP25963 317 aa25.4■■□□□ 1.66
CPNE1-205ENST00000401607 MMP12P39900 470 aa25.4■■□□□ 1.66
CPNE1-205ENST00000401607 GRIA2P42262 883 aa25.4■■□□□ 1.66
CPNE1-205ENST00000401607 ASPHQ12797 758 aa25.4■■□□□ 1.66
CPNE1-205ENST00000401607 ELAVL3Q14576 367 aaKnown RBP25.4■■□□□ 1.66
CPNE1-205ENST00000401607 WDR75Q8IWA0 830 aaKnown RBP25.4■■□□□ 1.66
CPNE1-205ENST00000401607 NKAPQ8N5F7 415 aaKnown RBP25.4■■□□□ 1.66
CPNE1-205ENST00000401607 ZNF781Q8N8C0 355 aa25.4■■□□□ 1.66
CPNE1-205ENST00000401607 RHEBL1Q8TAI7 183 aa25.4■■□□□ 1.66
CPNE1-205ENST00000401607 PIP4K2CQ8TBX8 421 aa25.4■■□□□ 1.66
CPNE1-205ENST00000401607 ARRDC3Q96B67 414 aa25.4■■□□□ 1.66
CPNE1-205ENST00000401607 CCDC126Q96EE4 140 aa25.4■■□□□ 1.66
CPNE1-205ENST00000401607 TMEM237Q96Q45 408 aa25.4■■□□□ 1.66
CPNE1-205ENST00000401607 LRRC37BQ96QE4 947 aa25.4■■□□□ 1.66
CPNE1-205ENST00000401607 ATOH8Q96SQ7 321 aa25.4■■□□□ 1.66
CPNE1-205ENST00000401607 ACOX2Q99424 681 aa25.4■■□□□ 1.66
CPNE1-205ENST00000401607 CYP4F12Q9HCS2 524 aa25.4■■□□□ 1.66
CPNE1-205ENST00000401607 GNPTGQ9UJJ9 305 aa25.4■■□□□ 1.66
CPNE1-205ENST00000401607 IPO13O94829 963 aaKnown RBP25.39■■□□□ 1.66
CPNE1-205ENST00000401607 SKIV2L2P42285 1042 aaKnown RBP25.39■■□□□ 1.66
CPNE1-205ENST00000401607 EGFLAMQ63HQ2 1017 aa25.39■■□□□ 1.66
CPNE1-205ENST00000401607 PTRHD1Q6GMV3 140 aaKnown RBP25.39■■□□□ 1.66
CPNE1-205ENST00000401607 MTSS1LQ765P7 747 aa25.39■■□□□ 1.66
CPNE1-205ENST00000401607 MAVSQ7Z434 540 aa25.39■■□□□ 1.66
CPNE1-205ENST00000401607 LSMEM2Q8N112 164 aa25.39■■□□□ 1.66
CPNE1-205ENST00000401607 CLDN19Q8N6F1 224 aa25.39■■□□□ 1.66
CPNE1-205ENST00000401607 LKAAEAR1Q8TD35 194 aa25.39■■□□□ 1.66
CPNE1-205ENST00000401607 KIAA1191Q96A73 305 aa25.39■■□□□ 1.66
CPNE1-205ENST00000401607 ERP27Q96DN0 273 aa25.39■■□□□ 1.66
CPNE1-205ENST00000401607 FBRSL1Q9HCM7 1045 aaKnown RBP25.39■■□□□ 1.66
CPNE1-205ENST00000401607 EPS15L1Q9UBC2 864 aa25.39■■□□□ 1.66
CPNE1-205ENST00000401607 HEY2Q9UBP5 337 aa25.39■■□□□ 1.66
CPNE1-205ENST00000401607 TMPRSS11EQ9UL52 423 aa25.39■■□□□ 1.66
CPNE1-205ENST00000401607 SZT2Q5T011 3432 aa25.39■■□□□ 1.65
CPNE1-205ENST00000401607 F8W8V4 182 aa25.39■■□□□ 1.65
CPNE1-205ENST00000401607 SPINT1O43278 529 aa25.39■■□□□ 1.65
CPNE1-205ENST00000401607 ITGB7P26010 798 aa25.39■■□□□ 1.65
CPNE1-205ENST00000401607 SOX9P48436 509 aa25.39■■□□□ 1.65
CPNE1-205ENST00000401607 ATP6V0D1P61421 351 aa25.39■■□□□ 1.65
CPNE1-205ENST00000401607 HTR4Q13639 388 aa25.39■■□□□ 1.65
CPNE1-205ENST00000401607 SETDB1Q15047 1291 aa25.39■■□□□ 1.65
CPNE1-205ENST00000401607 ARL13AQ5H913 290 aaPredicted RBP25.39■■□□□ 1.65
CPNE1-205ENST00000401607 TRIM67Q6ZTA4 783 aa25.39■■□□□ 1.65
CPNE1-205ENST00000401607 CPNE9Q8IYJ1 553 aa25.39■■□□□ 1.65
CPNE1-205ENST00000401607 GBP7Q8N8V2 638 aaPredicted RBP25.39■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms